RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 PPP1CCP36873 323 aaKnown RBP8.58□□□□□ -1.04
PTPN7-204ENST00000462815 OR3A3P47888 321 aa8.58□□□□□ -1.04
PTPN7-204ENST00000462815 PPP3R1P63098 170 aa8.58□□□□□ -1.04
PTPN7-204ENST00000462815 HTD2P86397 168 aa8.58□□□□□ -1.04
PTPN7-204ENST00000462815 TMEM65Q6PI78 240 aa8.58□□□□□ -1.04
PTPN7-204ENST00000462815 TRAT1Q6PIZ9 186 aa8.58□□□□□ -1.04
PTPN7-204ENST00000462815 ZNF554Q86TJ5 538 aa8.58□□□□□ -1.04
PTPN7-204ENST00000462815 PRR18Q8N4B5 295 aa8.58□□□□□ -1.04
PTPN7-204ENST00000462815 NANOGP1Q8N7R0 232 aa8.58□□□□□ -1.04
PTPN7-204ENST00000462815 TSPAN14Q8NG11 270 aa8.58□□□□□ -1.04
PTPN7-204ENST00000462815 NEK7Q8TDX7 302 aa8.58□□□□□ -1.04
PTPN7-204ENST00000462815 CASTOR1Q8WTX7 329 aa8.58□□□□□ -1.04
PTPN7-204ENST00000462815 ARPC1AQ92747 370 aa8.58□□□□□ -1.04
PTPN7-204ENST00000462815 MUL1Q969V5 352 aa8.58□□□□□ -1.04
PTPN7-204ENST00000462815 MRPS24Q96EL2 167 aaKnown RBP8.58□□□□□ -1.04
PTPN7-204ENST00000462815 OR2S2Q9NQN1 319 aa8.58□□□□□ -1.04
PTPN7-204ENST00000462815 JPT1Q9UK76 154 aa8.58□□□□□ -1.04
PTPN7-204ENST00000462815 LSM2Q9Y333 95 aaKnown RBP8.58□□□□□ -1.04
PTPN7-204ENST00000462815 EXOSC1Q9Y3B2 195 aaKnown RBP8.58□□□□□ -1.04
PTPN7-204ENST00000462815 NUBP2Q9Y5Y2 271 aa8.58□□□□□ -1.04
PTPN7-204ENST00000462815 FRAS1Q86XX4 4008 aa8.57□□□□□ -1.04
PTPN7-204ENST00000462815 A0A087WXM4 84 aa8.57□□□□□ -1.04
PTPN7-204ENST00000462815 MCRIP1C9JLW8 97 aa8.57□□□□□ -1.04
PTPN7-204ENST00000462815 FCN1O00602 326 aa8.57□□□□□ -1.04
PTPN7-204ENST00000462815 YPEL1O60688 119 aa8.57□□□□□ -1.04
PTPN7-204ENST00000462815 CA11O75493 328 aa8.57□□□□□ -1.04
PTPN7-204ENST00000462815 GLAP06280 429 aa8.57□□□□□ -1.04
PTPN7-204ENST00000462815 IGHV4-30-4P0DP06 118 aa8.57□□□□□ -1.04
PTPN7-204ENST00000462815 MAP2K4P45985 399 aa8.57□□□□□ -1.04
PTPN7-204ENST00000462815 GPR176Q14439 515 aa8.57□□□□□ -1.04
PTPN7-204ENST00000462815 LIN54Q6MZP7 749 aa8.57□□□□□ -1.04
PTPN7-204ENST00000462815 CD200R1LQ6Q8B3 271 aa8.57□□□□□ -1.04
PTPN7-204ENST00000462815 GLIPR1L1Q6UWM5 242 aa8.57□□□□□ -1.04
PTPN7-204ENST00000462815 GHSRQ92847 366 aa8.57□□□□□ -1.04
PTPN7-204ENST00000462815 YPEL2Q96QA6 119 aa8.57□□□□□ -1.04
PTPN7-204ENST00000462815 OR14A2Q96R54 314 aa8.57□□□□□ -1.04
PTPN7-204ENST00000462815 BANF2Q9H503 90 aa8.57□□□□□ -1.04
PTPN7-204ENST00000462815 ACOT13Q9NPJ3 140 aa8.57□□□□□ -1.04
PTPN7-204ENST00000462815 BABAM2Q9NXR7 383 aa8.57□□□□□ -1.04
PTPN7-204ENST00000462815 GAB2Q9UQC2 676 aa8.57□□□□□ -1.04
PTPN7-204ENST00000462815 MRPS28Q9Y2Q9 187 aaKnown RBP8.57□□□□□ -1.04
PTPN7-204ENST00000462815 PEX16Q9Y5Y5 336 aa8.57□□□□□ -1.04
PTPN7-204ENST00000462815 A0A1W2PN81 502 aa8.56□□□□□ -1.04
PTPN7-204ENST00000462815 IGLV1-51P01701 117 aa8.56□□□□□ -1.04
PTPN7-204ENST00000462815 MGMTP16455 207 aa8.56□□□□□ -1.04
PTPN7-204ENST00000462815 CHRNA7P36544 502 aa8.56□□□□□ -1.04
PTPN7-204ENST00000462815 CX3CL1P78423 397 aa8.56□□□□□ -1.04
PTPN7-204ENST00000462815 HMGN3Q15651 99 aa8.56□□□□□ -1.04
PTPN7-204ENST00000462815 ECSCRQ19T08 205 aa8.56□□□□□ -1.04
PTPN7-204ENST00000462815 Q499Y3 187 aa8.56□□□□□ -1.04
PTPN7-204ENST00000462815 ZNF660Q6AZW8 331 aaPredicted RBP8.56□□□□□ -1.04
PTPN7-204ENST00000462815 FAM71F2Q6NXP2 309 aa8.56□□□□□ -1.04
PTPN7-204ENST00000462815 HAPLN4Q86UW8 402 aa8.56□□□□□ -1.04
PTPN7-204ENST00000462815 OR6Q1Q8NGQ2 317 aa8.56□□□□□ -1.04
PTPN7-204ENST00000462815 RHOVQ96L33 236 aa8.56□□□□□ -1.04
PTPN7-204ENST00000462815 S100A13Q99584 98 aa8.56□□□□□ -1.04
PTPN7-204ENST00000462815 THAP7Q9BT49 309 aaPredicted RBP8.56□□□□□ -1.04
PTPN7-204ENST00000462815 CCDC90BQ9GZT6 254 aa8.56□□□□□ -1.04
PTPN7-204ENST00000462815 RAB9BQ9NP90 201 aa8.56□□□□□ -1.04
PTPN7-204ENST00000462815 FOXA2Q9Y261 457 aaPredicted RBP8.56□□□□□ -1.04
PTPN7-204ENST00000462815 UBE2QL1A1L167 161 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 PDCD6O75340 191 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 PROP1O75360 226 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 OR8U9P0C7N5 309 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 CT45A6P0DMU7 189 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 CT45A5P0DMU8 189 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 CT45A7P0DMV0 189 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 MYL12AP19105 171 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 FUT3P21217 361 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 VEGFCP49767 419 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 SSBP2P81877 361 aaPredicted RBP8.55□□□□□ -1.04
PTPN7-204ENST00000462815 TBCEQ15813 527 aaPredicted RBP8.55□□□□□ -1.04
PTPN7-204ENST00000462815 YIF1BQ5BJH7 314 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 UBE2UQ5VVX9 321 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 ZNF880Q6PDB4 577 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 FAM131AQ6UXB0 335 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 CDH26Q8IXH8 852 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 TCTEX1D1Q8N7M0 179 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 ZFP41Q8N8Y5 198 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 DERL3Q96Q80 235 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 AGMATQ9BSE5 352 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 MRPS26Q9BYN8 205 aaKnown RBP8.55□□□□□ -1.04
PTPN7-204ENST00000462815 SELENOIQ9C0D9 397 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 PARP12Q9H0J9 701 aaKnown RBP8.55□□□□□ -1.04
PTPN7-204ENST00000462815 CST11Q9H112 138 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 FBXL15Q9H469 300 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 ZMAT4Q9H898 229 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 ERGIC3Q9Y282 383 aa8.55□□□□□ -1.04
PTPN7-204ENST00000462815 A0A1W2PPK0 400 aa8.54□□□□□ -1.04
PTPN7-204ENST00000462815 H0YJW9 148 aa8.54□□□□□ -1.04
PTPN7-204ENST00000462815 RRHO14718 337 aa8.54□□□□□ -1.04
PTPN7-204ENST00000462815 LDLRAD4O15165 306 aa8.54□□□□□ -1.04
PTPN7-204ENST00000462815 HSPA12AO43301 675 aa8.54□□□□□ -1.04
PTPN7-204ENST00000462815 IGHV3-11P01762 117 aa8.54□□□□□ -1.04
PTPN7-204ENST00000462815 MAS1P04201 325 aa8.54□□□□□ -1.04
PTPN7-204ENST00000462815 HSPB1P04792 205 aaKnown RBP8.54□□□□□ -1.04
PTPN7-204ENST00000462815 TFAP2AP05549 437 aa8.54□□□□□ -1.04
PTPN7-204ENST00000462815 ALDH3B2P48448 385 aa8.54□□□□□ -1.04
PTPN7-204ENST00000462815 WNT4P56705 351 aa8.54□□□□□ -1.04
PTPN7-204ENST00000462815 SRSF7Q16629 238 aaKnown RBP eCLIP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms