RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 WNT4P56705 351 aa12.44□□□□□ -0.42
COL7A1-204ENST00000462475 CX3CL1P78423 397 aa12.44□□□□□ -0.42
COL7A1-204ENST00000462475 FAM71F2Q6NXP2 309 aa12.44□□□□□ -0.42
COL7A1-204ENST00000462475 GLDNQ6ZMI3 551 aaPredicted RBP12.44□□□□□ -0.42
COL7A1-204ENST00000462475 OVCH2Q7RTZ1 564 aa12.44□□□□□ -0.42
COL7A1-204ENST00000462475 ARPC1AQ92747 370 aa12.44□□□□□ -0.42
COL7A1-204ENST00000462475 RCHY1Q96PM5 261 aa12.44□□□□□ -0.42
COL7A1-204ENST00000462475 NEDD4LQ96PU5 975 aa12.44□□□□□ -0.42
COL7A1-204ENST00000462475 LYSTQ99698 3801 aa12.44□□□□□ -0.42
COL7A1-204ENST00000462475 FAAP24Q9BTP7 215 aa12.44□□□□□ -0.42
COL7A1-204ENST00000462475 TPSG1Q9NRR2 321 aa12.44□□□□□ -0.42
COL7A1-204ENST00000462475 CNOT2Q9NZN8 540 aaKnown RBP12.44□□□□□ -0.42
COL7A1-204ENST00000462475 FOXA2Q9Y261 457 aaPredicted RBP12.44□□□□□ -0.42
COL7A1-204ENST00000462475 IGHV4OR15-8A0A075B7B6 117 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 A0A087WW49 117 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 LINC01619G3V211 115 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 FCN1O00602 326 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 RRHO14718 337 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 LGALS1P09382 135 aaKnown RBP12.43□□□□□ -0.42
COL7A1-204ENST00000462475 GNAO1P09471 354 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 CT45A6P0DMU7 189 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 CT45A5P0DMU8 189 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 CT45A7P0DMV0 189 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 EGR2P11161 476 aaPredicted RBP12.43□□□□□ -0.42
COL7A1-204ENST00000462475 HTR2CP28335 458 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 RPS27AP62979 156 aaKnown RBP12.43□□□□□ -0.42
COL7A1-204ENST00000462475 ZNF660Q6AZW8 331 aaPredicted RBP12.43□□□□□ -0.42
COL7A1-204ENST00000462475 LRRTM1Q86UE6 522 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 DHRSXQ8N5I4 330 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 MUC7Q8TAX7 377 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 THRSPQ92748 146 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 NICN1Q9BSH3 213 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 TMEM59Q9BXS4 323 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 PIPOXQ9P0Z9 390 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 ABRACLQ9P1F3 81 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 STEAP1Q9UHE8 339 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 SLC23A1Q9UHI7 598 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 PSORS1C1Q9UIG5 152 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 GAB2Q9UQC2 676 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 ERGIC3Q9Y282 383 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 LRRC42Q9Y546 428 aa12.43□□□□□ -0.42
COL7A1-204ENST00000462475 H0YJW9 148 aa12.42□□□□□ -0.42
COL7A1-204ENST00000462475 RAB29O14966 203 aa12.42□□□□□ -0.42
COL7A1-204ENST00000462475 NAPSAO96009 420 aa12.42□□□□□ -0.42
COL7A1-204ENST00000462475 IGHV3-11P01762 117 aa12.42□□□□□ -0.42
COL7A1-204ENST00000462475 FRMD6-AS1P0C7T7 363 aa12.42□□□□□ -0.42
COL7A1-204ENST00000462475 UBBP0CG47 229 aa12.42□□□□□ -0.42
COL7A1-204ENST00000462475 SNRPBP14678 240 aaKnown RBP12.42□□□□□ -0.42
COL7A1-204ENST00000462475 GP9P14770 177 aa12.42□□□□□ -0.42
COL7A1-204ENST00000462475 UNC119Q13432 240 aa12.42□□□□□ -0.42
COL7A1-204ENST00000462475 PLGLAQ15195 96 aa12.42□□□□□ -0.42
COL7A1-204ENST00000462475 ZNF880Q6PDB4 577 aa12.42□□□□□ -0.42
COL7A1-204ENST00000462475 PACRGLQ8N7B6 248 aa12.42□□□□□ -0.42
COL7A1-204ENST00000462475 ABHD5Q8WTS1 349 aa12.42□□□□□ -0.42
COL7A1-204ENST00000462475 ABHD14BQ96IU4 210 aa12.42□□□□□ -0.42
COL7A1-204ENST00000462475 FAM103A1Q9BTL3 118 aaKnown RBP12.42□□□□□ -0.42
COL7A1-204ENST00000462475 CHMP1AQ9HD42 196 aaPredicted RBP12.42□□□□□ -0.42
COL7A1-204ENST00000462475 SORL1Q92673 2214 aa12.41□□□□□ -0.42
COL7A1-204ENST00000462475 A0A0A6YYD4 124 aa12.41□□□□□ -0.42
COL7A1-204ENST00000462475 OR5H14A6NHG9 310 aa12.41□□□□□ -0.42
COL7A1-204ENST00000462475 TRIM64CA6NLI5 447 aa12.41□□□□□ -0.42
COL7A1-204ENST00000462475 ACSM3Q53FZ2 586 aa12.41□□□□□ -0.42
COL7A1-204ENST00000462475 RBM48Q5RL73 367 aaKnown RBP12.41□□□□□ -0.42
COL7A1-204ENST00000462475 C1orf100Q5SVJ3 147 aa12.41□□□□□ -0.42
COL7A1-204ENST00000462475 CASC10Q5T4H9 136 aa12.41□□□□□ -0.42
COL7A1-204ENST00000462475 ACSM6Q6P461 480 aa12.41□□□□□ -0.42
COL7A1-204ENST00000462475 C8orf59Q8N0T1 100 aaPredicted RBP12.41□□□□□ -0.42
COL7A1-204ENST00000462475 TCTEX1D1Q8N7M0 179 aa12.41□□□□□ -0.42
COL7A1-204ENST00000462475 NANOGP1Q8N7R0 232 aa12.41□□□□□ -0.42
COL7A1-204ENST00000462475 SETD6Q8TBK2 473 aa12.41□□□□□ -0.42
COL7A1-204ENST00000462475 TM2D1Q9BX74 207 aa12.41□□□□□ -0.42
COL7A1-204ENST00000462475 TENM2Q9NT68 2774 aa12.41□□□□□ -0.42
COL7A1-204ENST00000462475 OR1A1Q9P1Q5 309 aa12.41□□□□□ -0.42
COL7A1-204ENST00000462475 NUBP2Q9Y5Y2 271 aa12.41□□□□□ -0.42
COL7A1-204ENST00000462475 CSMD3Q7Z407 3707 aa12.4□□□□□ -0.42
COL7A1-204ENST00000462475 GSTP1P09211 210 aaKnown RBP12.4□□□□□ -0.42
COL7A1-204ENST00000462475 GLT8D1Q68CQ7 371 aa12.4□□□□□ -0.42
COL7A1-204ENST00000462475 CD200R1LQ6Q8B3 271 aa12.4□□□□□ -0.42
COL7A1-204ENST00000462475 MOB1BQ7L9L4 216 aa12.4□□□□□ -0.42
COL7A1-204ENST00000462475 HAPLN4Q86UW8 402 aa12.4□□□□□ -0.42
COL7A1-204ENST00000462475 PPP1R27Q86WC6 154 aa12.4□□□□□ -0.42
COL7A1-204ENST00000462475 BPIFB6Q8NFQ5 453 aa12.4□□□□□ -0.42
COL7A1-204ENST00000462475 OR6Q1Q8NGQ2 317 aa12.4□□□□□ -0.42
COL7A1-204ENST00000462475 FBLIM1Q8WUP2 373 aa12.4□□□□□ -0.42
COL7A1-204ENST00000462475 MS4A10Q96PG2 267 aa12.4□□□□□ -0.42
COL7A1-204ENST00000462475 CLCC1Q96S66 551 aa12.4□□□□□ -0.42
COL7A1-204ENST00000462475 AGMATQ9BSE5 352 aa12.4□□□□□ -0.42
COL7A1-204ENST00000462475 HDHD3Q9BSH5 251 aaPredicted RBP12.4□□□□□ -0.42
COL7A1-204ENST00000462475 TMED9Q9BVK6 235 aa12.4□□□□□ -0.42
COL7A1-204ENST00000462475 C8orf4Q9NR00 106 aa12.4□□□□□ -0.42
COL7A1-204ENST00000462475 PLCXD1Q9NUJ7 323 aa12.4□□□□□ -0.42
COL7A1-204ENST00000462475 WASHC3Q9Y3C0 194 aa12.4□□□□□ -0.42
COL7A1-204ENST00000462475 TMEM14DPA8MWL7 114 aa12.39□□□□□ -0.43
COL7A1-204ENST00000462475 H7C2Y5 167 aa12.39□□□□□ -0.43
COL7A1-204ENST00000462475 SLC22A1O15245 554 aa12.39□□□□□ -0.43
COL7A1-204ENST00000462475 OR8U9P0C7N5 309 aa12.39□□□□□ -0.43
COL7A1-204ENST00000462475 TPPP2P59282 170 aa12.39□□□□□ -0.43
COL7A1-204ENST00000462475 QRFPP83859 136 aa12.39□□□□□ -0.43
COL7A1-204ENST00000462475 PITPNAQ00169 270 aa12.39□□□□□ -0.43
COL7A1-204ENST00000462475 ACTBL2Q562R1 376 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms