RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 RNF152Q8N8N0 203 aa10.94□□□□□ -0.66
USP4-206ENST00000461553 EDARADDQ8WWZ3 215 aa10.94□□□□□ -0.66
USP4-206ENST00000461553 RAX2Q96IS3 184 aa10.94□□□□□ -0.66
USP4-206ENST00000461553 KCTD7Q96MP8 289 aa10.94□□□□□ -0.66
USP4-206ENST00000461553 GFI1Q99684 422 aa10.94□□□□□ -0.66
USP4-206ENST00000461553 MGLLQ99685 303 aa10.94□□□□□ -0.66
USP4-206ENST00000461553 PARP11Q9NR21 331 aa10.94□□□□□ -0.66
USP4-206ENST00000461553 SLC23A1Q9UHI7 598 aa10.94□□□□□ -0.66
USP4-206ENST00000461553 AK3Q9UIJ7 227 aa10.94□□□□□ -0.66
USP4-206ENST00000461553 OR5H14A6NHG9 310 aa10.93□□□□□ -0.66
USP4-206ENST00000461553 ATP6V0E1O15342 81 aa10.93□□□□□ -0.66
USP4-206ENST00000461553 SOCS1O15524 211 aa10.93□□□□□ -0.66
USP4-206ENST00000461553 CD37P11049 281 aa10.93□□□□□ -0.66
USP4-206ENST00000461553 CNTFRP26992 372 aa10.93□□□□□ -0.66
USP4-206ENST00000461553 MAP2K4P45985 399 aa10.93□□□□□ -0.66
USP4-206ENST00000461553 CDX1P47902 265 aaPredicted RBP10.93□□□□□ -0.66
USP4-206ENST00000461553 KRTAP10-11P60412 298 aa10.93□□□□□ -0.66
USP4-206ENST00000461553 ZNF367Q7RTV3 350 aa10.93□□□□□ -0.66
USP4-206ENST00000461553 OR5M8Q8NGP6 311 aa10.93□□□□□ -0.66
USP4-206ENST00000461553 C4orf3Q8WVX3 66 aa10.93□□□□□ -0.66
USP4-206ENST00000461553 CNBD2Q96M20 576 aa10.93□□□□□ -0.66
USP4-206ENST00000461553 CHCHD6Q9BRQ6 235 aa10.93□□□□□ -0.66
USP4-206ENST00000461553 HDHD3Q9BSH5 251 aaPredicted RBP10.93□□□□□ -0.66
USP4-206ENST00000461553 OR51J1Q9H342 316 aa10.93□□□□□ -0.66
USP4-206ENST00000461553 ACOT13Q9NPJ3 140 aa10.93□□□□□ -0.66
USP4-206ENST00000461553 ZMAT5Q9UDW3 170 aaKnown RBP10.93□□□□□ -0.66
USP4-206ENST00000461553 HSF4Q9ULV5 492 aa10.93□□□□□ -0.66
USP4-206ENST00000461553 ITGB1BP1O14713 200 aa10.92□□□□□ -0.66
USP4-206ENST00000461553 NDUFA3O95167 84 aa10.92□□□□□ -0.66
USP4-206ENST00000461553 ZBTB25P24278 435 aa10.92□□□□□ -0.66
USP4-206ENST00000461553 PSMB8P28062 276 aa10.92□□□□□ -0.66
USP4-206ENST00000461553 VEGFCP49767 419 aa10.92□□□□□ -0.66
USP4-206ENST00000461553 PSMD7P51665 324 aa10.92□□□□□ -0.66
USP4-206ENST00000461553 CLDN12P56749 244 aa10.92□□□□□ -0.66
USP4-206ENST00000461553 MRPS15P82914 257 aaKnown RBP10.92□□□□□ -0.66
USP4-206ENST00000461553 FABP5Q01469 135 aa10.92□□□□□ -0.66
USP4-206ENST00000461553 DCTN2Q13561 401 aaKnown RBP10.92□□□□□ -0.66
USP4-206ENST00000461553 C5orf64Q2M2E5 130 aa10.92□□□□□ -0.66
USP4-206ENST00000461553 RPL39P5Q59GN2 51 aa10.92□□□□□ -0.66
USP4-206ENST00000461553 TMEM65Q6PI78 240 aa10.92□□□□□ -0.66
USP4-206ENST00000461553 FAM89BQ8N5H3 189 aa10.92□□□□□ -0.66
USP4-206ENST00000461553 OR56B1Q8NGI3 324 aa10.92□□□□□ -0.66
USP4-206ENST00000461553 FAM3DQ96BQ1 224 aa10.92□□□□□ -0.66
USP4-206ENST00000461553 ARHGAP5-AS1Q96IT6 56 aa10.92□□□□□ -0.66
USP4-206ENST00000461553 CMSS1Q9BQ75 279 aaKnown RBP10.92□□□□□ -0.66
USP4-206ENST00000461553 GHITMQ9H3K2 345 aa10.92□□□□□ -0.66
USP4-206ENST00000461553 V9GY05 133 aa10.92□□□□□ -0.66
USP4-206ENST00000461553 IGHV7-81A0A0B4J1V7 117 aa10.91□□□□□ -0.66
USP4-206ENST00000461553 WI2-2373I1.2A0A1W2PRP0 233 aa10.91□□□□□ -0.66
USP4-206ENST00000461553 ERICH4A6NGS2 130 aa10.91□□□□□ -0.66
USP4-206ENST00000461553 FOXI3A8MTJ6 420 aaPredicted RBP10.91□□□□□ -0.66
USP4-206ENST00000461553 MYL9P24844 172 aa10.91□□□□□ -0.66
USP4-206ENST00000461553 KIR2DS1Q14954 304 aa10.91□□□□□ -0.66
USP4-206ENST00000461553 PLGLAQ15195 96 aa10.91□□□□□ -0.66
USP4-206ENST00000461553 ECSCRQ19T08 205 aa10.91□□□□□ -0.66
USP4-206ENST00000461553 HES5Q5TA89 166 aa10.91□□□□□ -0.66
USP4-206ENST00000461553 NPBQ8NG41 125 aa10.91□□□□□ -0.66
USP4-206ENST00000461553 ABHD14BQ96IU4 210 aa10.91□□□□□ -0.66
USP4-206ENST00000461553 PECRQ9BY49 303 aa10.91□□□□□ -0.66
USP4-206ENST00000461553 Q9N2K0 584 aa10.91□□□□□ -0.66
USP4-206ENST00000461553 OR1A1Q9P1Q5 309 aa10.91□□□□□ -0.66
USP4-206ENST00000461553 WASHC3Q9Y3C0 194 aa10.91□□□□□ -0.66
USP4-206ENST00000461553 WSB1Q9Y6I7 421 aa10.91□□□□□ -0.66
USP4-206ENST00000461553 COL7A1Q02388 2944 aa10.91□□□□□ -0.66
USP4-206ENST00000461553 TRAV41A0A0B4J266 112 aa10.9□□□□□ -0.66
USP4-206ENST00000461553 TMEM272A0A1B0GTI8 110 aa10.9□□□□□ -0.66
USP4-206ENST00000461553 G3V318 75 aa10.9□□□□□ -0.66
USP4-206ENST00000461553 H0YJW9 148 aa10.9□□□□□ -0.66
USP4-206ENST00000461553 H7C2Y5 167 aa10.9□□□□□ -0.66
USP4-206ENST00000461553 PDCD5O14737 125 aa10.9□□□□□ -0.66
USP4-206ENST00000461553 DENRO43583 198 aaKnown RBP10.9□□□□□ -0.66
USP4-206ENST00000461553 RBBP9O75884 186 aa10.9□□□□□ -0.66
USP4-206ENST00000461553 GSTP1P09211 210 aaKnown RBP10.9□□□□□ -0.66
USP4-206ENST00000461553 CEACAM6P40199 344 aa10.9□□□□□ -0.66
USP4-206ENST00000461553 DEFB121Q5J5C9 76 aa10.9□□□□□ -0.66
USP4-206ENST00000461553 LIN54Q6MZP7 749 aa10.9□□□□□ -0.66
USP4-206ENST00000461553 GLDNQ6ZMI3 551 aaPredicted RBP10.9□□□□□ -0.66
USP4-206ENST00000461553 ABHD5Q8WTS1 349 aa10.9□□□□□ -0.66
USP4-206ENST00000461553 RITA1Q96K30 269 aa10.9□□□□□ -0.66
USP4-206ENST00000461553 PARP12Q9H0J9 701 aaKnown RBP10.9□□□□□ -0.66
USP4-206ENST00000461553 NDUFB11Q9NX14 153 aa10.9□□□□□ -0.66
USP4-206ENST00000461553 SORL1Q92673 2214 aa10.9□□□□□ -0.66
USP4-206ENST00000461553 RRHO14718 337 aa10.89□□□□□ -0.67
USP4-206ENST00000461553 SCTP09683 121 aa10.89□□□□□ -0.67
USP4-206ENST00000461553 CD3GP09693 182 aa10.89□□□□□ -0.67
USP4-206ENST00000461553 CT45A6P0DMU7 189 aa10.89□□□□□ -0.67
USP4-206ENST00000461553 CT45A5P0DMU8 189 aa10.89□□□□□ -0.67
USP4-206ENST00000461553 CT45A7P0DMV0 189 aa10.89□□□□□ -0.67
USP4-206ENST00000461553 GADD45AP24522 165 aa10.89□□□□□ -0.67
USP4-206ENST00000461553 MC5RP33032 325 aa10.89□□□□□ -0.67
USP4-206ENST00000461553 LUMP51884 338 aaPredicted RBP10.89□□□□□ -0.67
USP4-206ENST00000461553 TMEM50BP56557 158 aa10.89□□□□□ -0.67
USP4-206ENST00000461553 GABARAPL2P60520 117 aa10.89□□□□□ -0.67
USP4-206ENST00000461553 DGCR2P98153 550 aa10.89□□□□□ -0.67
USP4-206ENST00000461553 FHL3Q13643 280 aa10.89□□□□□ -0.67
USP4-206ENST00000461553 SSX1Q16384 188 aa10.89□□□□□ -0.67
USP4-206ENST00000461553 C2orf76Q3KRA6 126 aa10.89□□□□□ -0.67
USP4-206ENST00000461553 C9orf66Q5T8R8 295 aa10.89□□□□□ -0.67
USP4-206ENST00000461553 MYOZ3Q8TDC0 251 aa10.89□□□□□ -0.67
USP4-206ENST00000461553 C11orf54Q9H0W9 315 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms