RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 RAB29O14966 203 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 NAPSAO96009 420 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 CT45A6P0DMU7 189 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 CT45A5P0DMU8 189 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 CT45A7P0DMV0 189 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 EGR2P11161 476 aaPredicted RBP11.36□□□□□ -0.59
SMPD4-216ENST00000461187 HTR2CP28335 458 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 CHRNA7P36544 502 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 SLURP1P55000 103 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 CX3CL1P78423 397 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 ACSM3Q53FZ2 586 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 RPL39P5Q59GN2 51 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 C1orf100Q5SVJ3 147 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 LRRTM1Q86UE6 522 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 SBSPONQ8IVN8 264 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 SVOPQ8N4V2 548 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 CASTOR1Q8WTX7 329 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 FBLIM1Q8WUP2 373 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 IL1F10Q8WWZ1 152 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 NICN1Q9BSH3 213 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 TM2D1Q9BX74 207 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 TMEM59Q9BXS4 323 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 TOLLIPQ9H0E2 274 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 KCNK15Q9H427 330 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 FBXL15Q9H469 300 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 PIPOXQ9P0Z9 390 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 STEAP1Q9UHE8 339 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 SLC23A1Q9UHI7 598 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 FOXA2Q9Y261 457 aaPredicted RBP11.36□□□□□ -0.59
SMPD4-216ENST00000461187 ERGIC3Q9Y282 383 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 NUBP2Q9Y5Y2 271 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 TENM2Q9NT68 2774 aa11.36□□□□□ -0.59
SMPD4-216ENST00000461187 LINC01619G3V211 115 aa11.35□□□□□ -0.59
SMPD4-216ENST00000461187 FCN1O00602 326 aa11.35□□□□□ -0.59
SMPD4-216ENST00000461187 SAP30O75446 220 aa11.35□□□□□ -0.59
SMPD4-216ENST00000461187 LGALS1P09382 135 aaKnown RBP11.35□□□□□ -0.59
SMPD4-216ENST00000461187 SPNP16150 400 aa11.35□□□□□ -0.59
SMPD4-216ENST00000461187 QRFPP83859 136 aa11.35□□□□□ -0.59
SMPD4-216ENST00000461187 UNC119Q13432 240 aa11.35□□□□□ -0.59
SMPD4-216ENST00000461187 GLDNQ6ZMI3 551 aaPredicted RBP11.35□□□□□ -0.59
SMPD4-216ENST00000461187 C8orf59Q8N0T1 100 aaPredicted RBP11.35□□□□□ -0.59
SMPD4-216ENST00000461187 PARP12Q9H0J9 701 aaKnown RBP11.35□□□□□ -0.59
SMPD4-216ENST00000461187 FKBP14Q9NWM8 211 aa11.35□□□□□ -0.59
SMPD4-216ENST00000461187 DYNC2H1Q8NCM8 4307 aaKnown RBP11.35□□□□□ -0.59
SMPD4-216ENST00000461187 IGHV4OR15-8A0A075B7B6 117 aa11.34□□□□□ -0.59
SMPD4-216ENST00000461187 A0A087WW49 117 aa11.34□□□□□ -0.59
SMPD4-216ENST00000461187 A0A0A6YYD4 124 aa11.34□□□□□ -0.59
SMPD4-216ENST00000461187 OR5H14A6NHG9 310 aa11.34□□□□□ -0.59
SMPD4-216ENST00000461187 H0YJW9 148 aa11.34□□□□□ -0.59
SMPD4-216ENST00000461187 EBAG9O00559 213 aa11.34□□□□□ -0.59
SMPD4-216ENST00000461187 CD37P11049 281 aa11.34□□□□□ -0.59
SMPD4-216ENST00000461187 MC5RP33032 325 aa11.34□□□□□ -0.59
SMPD4-216ENST00000461187 GABPB1Q06547 395 aaPredicted RBP11.34□□□□□ -0.59
SMPD4-216ENST00000461187 GLT8D1Q68CQ7 371 aa11.34□□□□□ -0.59
SMPD4-216ENST00000461187 ACSM6Q6P461 480 aa11.34□□□□□ -0.59
SMPD4-216ENST00000461187 CD200R1LQ6Q8B3 271 aa11.34□□□□□ -0.59
SMPD4-216ENST00000461187 OVCH2Q7RTZ1 564 aa11.34□□□□□ -0.59
SMPD4-216ENST00000461187 TCTEX1D1Q8N7M0 179 aa11.34□□□□□ -0.59
SMPD4-216ENST00000461187 BPIFB6Q8NFQ5 453 aa11.34□□□□□ -0.59
SMPD4-216ENST00000461187 OR5AN1Q8NGI8 311 aa11.34□□□□□ -0.59
SMPD4-216ENST00000461187 KCNG3Q8TAE7 436 aa11.34□□□□□ -0.59
SMPD4-216ENST00000461187 PHYHIPQ92561 330 aa11.34□□□□□ -0.59
SMPD4-216ENST00000461187 ABHD14BQ96IU4 210 aa11.34□□□□□ -0.59
SMPD4-216ENST00000461187 RCHY1Q96PM5 261 aa11.34□□□□□ -0.59
SMPD4-216ENST00000461187 AGMATQ9BSE5 352 aa11.34□□□□□ -0.59
SMPD4-216ENST00000461187 CHMP1AQ9HD42 196 aaPredicted RBP11.34□□□□□ -0.59
SMPD4-216ENST00000461187 GAB2Q9UQC2 676 aa11.34□□□□□ -0.59
SMPD4-216ENST00000461187 A3GALT2U3KPV4 340 aa11.34□□□□□ -0.59
SMPD4-216ENST00000461187 TRBV6-6A0A0A6YYG2 114 aa11.33□□□□□ -0.6
SMPD4-216ENST00000461187 TMEM14DPA8MWL7 114 aa11.33□□□□□ -0.6
SMPD4-216ENST00000461187 ITGB1BP1O14713 200 aa11.33□□□□□ -0.6
SMPD4-216ENST00000461187 SNRPBP14678 240 aaKnown RBP11.33□□□□□ -0.6
SMPD4-216ENST00000461187 GP9P14770 177 aa11.33□□□□□ -0.6
SMPD4-216ENST00000461187 TMEM267Q0VDI3 215 aaPredicted RBP11.33□□□□□ -0.6
SMPD4-216ENST00000461187 PLGLAQ15195 96 aa11.33□□□□□ -0.6
SMPD4-216ENST00000461187 RBM48Q5RL73 367 aaKnown RBP11.33□□□□□ -0.6
SMPD4-216ENST00000461187 MOB1BQ7L9L4 216 aa11.33□□□□□ -0.6
SMPD4-216ENST00000461187 PPP1R27Q86WC6 154 aa11.33□□□□□ -0.6
SMPD4-216ENST00000461187 MS4A15Q8N5U1 240 aa11.33□□□□□ -0.6
SMPD4-216ENST00000461187 MUC7Q8TAX7 377 aa11.33□□□□□ -0.6
SMPD4-216ENST00000461187 SETD6Q8TBK2 473 aa11.33□□□□□ -0.6
SMPD4-216ENST00000461187 ABHD5Q8WTS1 349 aa11.33□□□□□ -0.6
SMPD4-216ENST00000461187 TMED9Q9BVK6 235 aa11.33□□□□□ -0.6
SMPD4-216ENST00000461187 PLEKHJ1Q9NW61 149 aa11.33□□□□□ -0.6
SMPD4-216ENST00000461187 WASHC3Q9Y3C0 194 aa11.33□□□□□ -0.6
SMPD4-216ENST00000461187 CSMD3Q7Z407 3707 aa11.33□□□□□ -0.6
SMPD4-216ENST00000461187 H7C2Y5 167 aa11.32□□□□□ -0.6
SMPD4-216ENST00000461187 SLC22A1O15245 554 aa11.32□□□□□ -0.6
SMPD4-216ENST00000461187 PROP1O75360 226 aa11.32□□□□□ -0.6
SMPD4-216ENST00000461187 RBBP9O75884 186 aa11.32□□□□□ -0.6
SMPD4-216ENST00000461187 IGHV3-11P01762 117 aa11.32□□□□□ -0.6
SMPD4-216ENST00000461187 HSPB1P04792 205 aaKnown RBP11.32□□□□□ -0.6
SMPD4-216ENST00000461187 GSTP1P09211 210 aaKnown RBP11.32□□□□□ -0.6
SMPD4-216ENST00000461187 FRMD6-AS1P0C7T7 363 aa11.32□□□□□ -0.6
SMPD4-216ENST00000461187 SRMP19623 302 aa11.32□□□□□ -0.6
SMPD4-216ENST00000461187 AKIRIN2Q53H80 203 aa11.32□□□□□ -0.6
SMPD4-216ENST00000461187 ACTBL2Q562R1 376 aa11.32□□□□□ -0.6
SMPD4-216ENST00000461187 CASC10Q5T4H9 136 aa11.32□□□□□ -0.6
SMPD4-216ENST00000461187 RNLSQ5VYX0 342 aa11.32□□□□□ -0.6
SMPD4-216ENST00000461187 PYHIN1Q6K0P9 492 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms