RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 TAS2R46P59540 309 aa11.13□□□□□ -0.63
CHRD-209ENST00000461120 ACTBP60709 375 aa11.13□□□□□ -0.63
CHRD-209ENST00000461120 ACTG1P63261 375 aa11.13□□□□□ -0.63
CHRD-209ENST00000461120 SRSF2Q01130 221 aaKnown RBP11.13□□□□□ -0.63
CHRD-209ENST00000461120 SSBP1Q04837 148 aaKnown RBP11.13□□□□□ -0.63
CHRD-209ENST00000461120 CDK10Q15131 360 aa11.13□□□□□ -0.63
CHRD-209ENST00000461120 ZNF79Q15937 498 aa11.13□□□□□ -0.63
CHRD-209ENST00000461120 RBMS3Q6XE24 437 aaKnown RBP11.13□□□□□ -0.63
CHRD-209ENST00000461120 Q6YL49 198 aa11.13□□□□□ -0.63
CHRD-209ENST00000461120 LDLRAD3Q86YD5 345 aa11.13□□□□□ -0.63
CHRD-209ENST00000461120 LYG1Q8N1E2 194 aa11.13□□□□□ -0.63
CHRD-209ENST00000461120 RPEQ96AT9 228 aa11.13□□□□□ -0.63
CHRD-209ENST00000461120 AGMATQ9BSE5 352 aa11.13□□□□□ -0.63
CHRD-209ENST00000461120 RBMX2Q9Y388 322 aaKnown RBP11.13□□□□□ -0.63
CHRD-209ENST00000461120 OOSP1A8MZH6 123 aa11.12□□□□□ -0.63
CHRD-209ENST00000461120 TUSC2O75896 110 aa11.12□□□□□ -0.63
CHRD-209ENST00000461120 PMP2P02689 132 aa11.12□□□□□ -0.63
CHRD-209ENST00000461120 OR5H8P0DN80 308 aa11.12□□□□□ -0.63
CHRD-209ENST00000461120 NFYAP23511 347 aaPredicted RBP11.12□□□□□ -0.63
CHRD-209ENST00000461120 OR3A3P47888 321 aa11.12□□□□□ -0.63
CHRD-209ENST00000461120 DIAPH2-AS1Q14236 149 aa11.12□□□□□ -0.63
CHRD-209ENST00000461120 PLA1AQ53H76 456 aa11.12□□□□□ -0.63
CHRD-209ENST00000461120 PYDC2Q56P42 97 aa11.12□□□□□ -0.63
CHRD-209ENST00000461120 LINC00299Q6ZSB3 139 aa11.12□□□□□ -0.63
CHRD-209ENST00000461120 ODF3L1Q8IXM7 274 aa11.12□□□□□ -0.63
CHRD-209ENST00000461120 OR5H2Q8NGV7 314 aa11.12□□□□□ -0.63
CHRD-209ENST00000461120 TOMM40LQ969M1 308 aa11.12□□□□□ -0.63
CHRD-209ENST00000461120 ST6GALNAC6Q969X2 333 aa11.12□□□□□ -0.63
CHRD-209ENST00000461120 ABHD14BQ96IU4 210 aa11.12□□□□□ -0.63
CHRD-209ENST00000461120 EHFQ9NZC4 300 aa11.12□□□□□ -0.63
CHRD-209ENST00000461120 RNF150Q9ULK6 438 aa11.12□□□□□ -0.63
CHRD-209ENST00000461120 KMT2CQ8NEZ4 4911 aaKnown RBP11.11□□□□□ -0.63
CHRD-209ENST00000461120 VGLL3A8MV65 326 aa11.11□□□□□ -0.63
CHRD-209ENST00000461120 ZNF736B4DX44 427 aaPredicted RBP11.11□□□□□ -0.63
CHRD-209ENST00000461120 HSD17B6O14756 317 aa11.11□□□□□ -0.63
CHRD-209ENST00000461120 GAPDHP04406 335 aaKnown RBP11.11□□□□□ -0.63
CHRD-209ENST00000461120 OR8U9P0C7N5 309 aa11.11□□□□□ -0.63
CHRD-209ENST00000461120 HRH1P35367 487 aa11.11□□□□□ -0.63
CHRD-209ENST00000461120 RFX2P48378 723 aa11.11□□□□□ -0.63
CHRD-209ENST00000461120 HILS1P60008 231 aa11.11□□□□□ -0.63
CHRD-209ENST00000461120 ZNF816Q0VGE8 651 aaPredicted RBP11.11□□□□□ -0.63
CHRD-209ENST00000461120 BAMBIQ13145 260 aa11.11□□□□□ -0.63
CHRD-209ENST00000461120 DYRK1AQ13627 763 aa11.11□□□□□ -0.63
CHRD-209ENST00000461120 AANATQ16613 207 aa11.11□□□□□ -0.63
CHRD-209ENST00000461120 LRRC75BQ2VPJ9 315 aa11.11□□□□□ -0.63
CHRD-209ENST00000461120 OVCH2Q7RTZ1 564 aa11.11□□□□□ -0.63
CHRD-209ENST00000461120 C3orf56Q8N813 242 aa11.11□□□□□ -0.63
CHRD-209ENST00000461120 TMEM229BQ8NBD8 167 aa11.11□□□□□ -0.63
CHRD-209ENST00000461120 OR8U1Q8NH10 309 aa11.11□□□□□ -0.63
CHRD-209ENST00000461120 SRRQ9GZT4 340 aa11.11□□□□□ -0.63
CHRD-209ENST00000461120 GHITMQ9H3K2 345 aa11.11□□□□□ -0.63
CHRD-209ENST00000461120 PIPOXQ9P0Z9 390 aa11.11□□□□□ -0.63
CHRD-209ENST00000461120 ZNF107Q9UII5 783 aaPredicted RBP11.11□□□□□ -0.63
CHRD-209ENST00000461120 OR2W1Q9Y3N9 320 aa11.11□□□□□ -0.63
CHRD-209ENST00000461120 SAA2-SAA4A0A096LPE2 208 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 A0A0A6YYJ9 748 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 A0A1W2PPI3 338 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 RAB29O14966 203 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 HOXA3O43365 443 aaPredicted RBP11.1□□□□□ -0.63
CHRD-209ENST00000461120 TCF21O43680 179 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 LANCL1O43813 399 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 IGHV4-59P01825 116 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 SAA2P0DJI9 122 aaPredicted RBP11.1□□□□□ -0.63
CHRD-209ENST00000461120 TBPP20226 339 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 AADACP22760 399 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 FCGR2CP31995 323 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 IER3P46695 156 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 REG1BP48304 166 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 ACTBL2Q562R1 376 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 ZNF660Q6AZW8 331 aaPredicted RBP11.1□□□□□ -0.63
CHRD-209ENST00000461120 CCDC144NLQ6NUI1 221 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 ZNF833PQ6ZTB9 187 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 Q8N402 240 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 MFSD4AQ8N468 514 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 ZDHHC22Q8N966 263 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 FAM216AQ8WUB2 273 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 SSMEM1Q8WWF3 244 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 GIMAP1Q8WWP7 306 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 RTN4IP1Q8WWV3 396 aaPredicted RBP11.1□□□□□ -0.63
CHRD-209ENST00000461120 JMJD8Q96S16 334 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 SSX3Q99909 188 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 ZNF251Q9BRH9 671 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 THAP7Q9BT49 309 aaPredicted RBP11.1□□□□□ -0.63
CHRD-209ENST00000461120 ESM1Q9NQ30 184 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 ZNF221Q9UK13 617 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 RBM7Q9Y580 266 aaKnown RBP11.1□□□□□ -0.63
CHRD-209ENST00000461120 TRRAPQ9Y4A5 3859 aa11.1□□□□□ -0.63
CHRD-209ENST00000461120 IGKV1D-13A0A0B4J2D9 117 aa11.09□□□□□ -0.63
CHRD-209ENST00000461120 IGHV1-3A0A0C4DH29 117 aa11.09□□□□□ -0.63
CHRD-209ENST00000461120 DNAJC9-AS1A6NH13 148 aa11.09□□□□□ -0.63
CHRD-209ENST00000461120 H3BUX3 64 aa11.09□□□□□ -0.63
CHRD-209ENST00000461120 J3QRK9 145 aa11.09□□□□□ -0.63
CHRD-209ENST00000461120 M0QYG6 137 aa11.09□□□□□ -0.63
CHRD-209ENST00000461120 TXNL1O43396 289 aa11.09□□□□□ -0.63
CHRD-209ENST00000461120 VENTXO95231 258 aa11.09□□□□□ -0.63
CHRD-209ENST00000461120 CD74P04233 296 aa11.09□□□□□ -0.63
CHRD-209ENST00000461120 CD3DP04234 171 aa11.09□□□□□ -0.63
CHRD-209ENST00000461120 CSF1P09603 554 aa11.09□□□□□ -0.63
CHRD-209ENST00000461120 IGKV1-13P0DP09 117 aa11.09□□□□□ -0.63
CHRD-209ENST00000461120 GPR12P47775 334 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms