RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 NBASA2RRP1 2371 aa9.02□□□□□ -0.97
IFT88-204ENST00000461115 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.01□□□□□ -0.97
IFT88-204ENST00000461115 LRRC30A6NM36 301 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 TMEM178BH3BS89 294 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 ADAM20O43506 726 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 IGKV1-5P01602 117 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 SERPINE2P07093 398 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 CD3EP07766 207 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 FAM157CP0CG43 387 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 BRWD1-AS2P59051 145 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 GNMTQ14749 295 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 C17orf58Q2M2W7 97 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 MORN2Q502X0 79 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 ADAM5Q6NVV9 412 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 HSD17B13Q7Z5P4 300 aaPredicted RBP9.01□□□□□ -0.97
IFT88-204ENST00000461115 PDZD9Q8IXQ8 264 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 C1orf87Q8N0U7 546 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 PRR18Q8N4B5 295 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 TPRX1Q8N7U7 411 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 OR10A7Q8NGE5 316 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 GPR146Q96CH1 333 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 GPHA2Q96T91 129 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 HSD17B10Q99714 261 aaKnown RBP9.01□□□□□ -0.97
IFT88-204ENST00000461115 OR2S2Q9NQN1 319 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 KAAG1Q9UBP8 84 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 LSM5Q9Y4Y9 91 aaKnown RBP9.01□□□□□ -0.97
IFT88-204ENST00000461115 COL6A6A6NMZ7 2263 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 ABCA4P78363 2273 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 DOCK11Q5JSL3 2073 aa9.01□□□□□ -0.97
IFT88-204ENST00000461115 IGHV3OR15-7A0A075B7D8 119 aa9□□□□□ -0.97
IFT88-204ENST00000461115 TRAV38-1A0A0B4J264 116 aa9□□□□□ -0.97
IFT88-204ENST00000461115 A0A0G2JRQ6 117 aa9□□□□□ -0.97
IFT88-204ENST00000461115 MFSD2BA6NFX1 497 aa9□□□□□ -0.97
IFT88-204ENST00000461115 FAM90A26D6RGX4 464 aa9□□□□□ -0.97
IFT88-204ENST00000461115 ATXN7O15265 892 aaPredicted RBP9□□□□□ -0.97
IFT88-204ENST00000461115 KCNAB3O43448 404 aa9□□□□□ -0.97
IFT88-204ENST00000461115 TNFSF12O43508 249 aa9□□□□□ -0.97
IFT88-204ENST00000461115 PROP1O75360 226 aa9□□□□□ -0.97
IFT88-204ENST00000461115 JTBO76095 146 aa9□□□□□ -0.97
IFT88-204ENST00000461115 CYB5R3P00387 301 aaPredicted RBP9□□□□□ -0.97
IFT88-204ENST00000461115 IRF2P14316 349 aa9□□□□□ -0.97
IFT88-204ENST00000461115 PPP1CCP36873 323 aaKnown RBP9□□□□□ -0.97
IFT88-204ENST00000461115 TMEM33P57088 247 aa9□□□□□ -0.97
IFT88-204ENST00000461115 MEF2CQ06413 473 aaPredicted RBP9□□□□□ -0.97
IFT88-204ENST00000461115 CATR1Q13166 79 aa9□□□□□ -0.97
IFT88-204ENST00000461115 AARDQ4LEZ3 155 aa9□□□□□ -0.97
IFT88-204ENST00000461115 FAM201AQ5SY85 155 aa9□□□□□ -0.97
IFT88-204ENST00000461115 THOC7Q6I9Y2 204 aaKnown RBP9□□□□□ -0.97
IFT88-204ENST00000461115 TCF23Q7RTU1 214 aa9□□□□□ -0.97
IFT88-204ENST00000461115 DCTN5Q9BTE1 182 aa9□□□□□ -0.97
IFT88-204ENST00000461115 OR2D2Q9H210 308 aa9□□□□□ -0.97
IFT88-204ENST00000461115 LYRM2Q9NU23 88 aaPredicted RBP9□□□□□ -0.97
IFT88-204ENST00000461115 CALYQ9NYX4 217 aa9□□□□□ -0.97
IFT88-204ENST00000461115 LAMP3Q9UQV4 416 aa9□□□□□ -0.97
IFT88-204ENST00000461115 KBTBD11-OT1A0A1B0GTJ5 212 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 A0A1B0GW55 424 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 ZNF729A6NN14 1252 aaPredicted RBP8.99□□□□□ -0.97
IFT88-204ENST00000461115 DEFB108AA8MXU0 73 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 RBFOX2O43251 390 aaKnown RBP eCLIP8.99□□□□□ -0.97
IFT88-204ENST00000461115 FGF2P09038 288 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 DUX4L2P0CJ85 424 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 DUX4L3P0CJ86 424 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 DUX4L4P0CJ87 422 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 DUX4L5P0CJ88 424 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 DUX4L6P0CJ89 424 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 DUX4L7P0CJ90 424 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 AGAP20933 346 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 ARHGDIBP52566 201 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 RPL30P62888 115 aaKnown RBP8.99□□□□□ -0.97
IFT88-204ENST00000461115 CCL8P80075 99 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 CDSNQ15517 529 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 Q3ZCU0 254 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 Q6ZRM9 215 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 COMMD7Q86VX2 200 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 ODF3L1Q8IXM7 274 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 ZNF808Q8N4W9 903 aaPredicted RBP8.99□□□□□ -0.97
IFT88-204ENST00000461115 OR2C3Q8N628 320 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.99□□□□□ -0.97
IFT88-204ENST00000461115 OR51H1Q8NH63 302 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 UBALD1Q8TB05 177 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 SAP30LQ9HAJ7 183 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 SDHAF2Q9NX18 166 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 GFOD1Q9NXC2 390 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 TAS2R3Q9NYW6 316 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 DUX4Q9UBX2 424 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 CLN8Q9UBY8 286 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 FBXL17Q9UF56 701 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 RBM7Q9Y580 266 aaKnown RBP8.99□□□□□ -0.97
IFT88-204ENST00000461115 MMP24Q9Y5R2 645 aa8.99□□□□□ -0.97
IFT88-204ENST00000461115 PPIAL4EA0A075B759 164 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 A8MXK9 166 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 PPIAL4DF5H284 164 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 ATG12O94817 140 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 PPIAL4FP0DN26 164 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 PVALBP20472 110 aaPredicted RBP8.98□□□□□ -0.97
IFT88-204ENST00000461115 PAX9P55771 341 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 TAS2R30P59541 319 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 BAXQ07812 192 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 EDDM3AQ14507 147 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 AANATQ16613 207 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms