RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 YIPF7Q8N8F6 280 aa2.88□□□□□ -1.95
ECHDC1-211ENST00000460558 OR5A2Q8NGI9 324 aa2.88□□□□□ -1.95
ECHDC1-211ENST00000460558 OR13A1Q8NGR1 328 aa2.88□□□□□ -1.95
ECHDC1-211ENST00000460558 OR13C3Q8NGS6 347 aa2.88□□□□□ -1.95
ECHDC1-211ENST00000460558 OR13C2Q8NGS9 318 aa2.88□□□□□ -1.95
ECHDC1-211ENST00000460558 OR10X1Q8NGY0 326 aa2.88□□□□□ -1.95
ECHDC1-211ENST00000460558 OR11H2Q8NH07 326 aa2.88□□□□□ -1.95
ECHDC1-211ENST00000460558 OR4A5Q8NH83 315 aa2.88□□□□□ -1.95
ECHDC1-211ENST00000460558 RASSF5Q8WWW0 418 aa2.88□□□□□ -1.95
ECHDC1-211ENST00000460558 FAM46BQ96A09 425 aa2.88□□□□□ -1.95
ECHDC1-211ENST00000460558 NSL1Q96IY1 281 aa2.88□□□□□ -1.95
ECHDC1-211ENST00000460558 PKNOX2Q96KN3 472 aa2.88□□□□□ -1.95
ECHDC1-211ENST00000460558 PPP1R36Q96LQ0 422 aa2.88□□□□□ -1.95
ECHDC1-211ENST00000460558 SPACA5Q96QH8 159 aa2.88□□□□□ -1.95
ECHDC1-211ENST00000460558 RAB17Q9H0T7 212 aa2.88□□□□□ -1.95
ECHDC1-211ENST00000460558 CST11Q9H112 138 aa2.88□□□□□ -1.95
ECHDC1-211ENST00000460558 HES4Q9HCC6 221 aa2.88□□□□□ -1.95
ECHDC1-211ENST00000460558 FAM118AQ9NWS6 357 aa2.88□□□□□ -1.95
ECHDC1-211ENST00000460558 TECRQ9NZ01 308 aaKnown RBP2.88□□□□□ -1.95
ECHDC1-211ENST00000460558 ELF5Q9UKW6 265 aaPredicted RBP2.88□□□□□ -1.95
ECHDC1-211ENST00000460558 KLHDC2Q9Y2U9 406 aa2.88□□□□□ -1.95
ECHDC1-211ENST00000460558 A0A087WUV0 522 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 DEFB131BA0A096LNP1 70 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 IGHV7-81A0A0B4J1V7 117 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 ZNF729A6NN14 1252 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 EFCAB9A8MZ26 197 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 ZNF878C9JN71 531 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 CLN5O75503 358 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 KRT36O76013 467 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 TRGV3P03979 118 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 SCTP09683 121 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 T-ENOLP0DO92 83 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 AREGP15514 252 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 ACKR3P25106 362 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 HSD11B1P28845 292 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 IL12AP29459 219 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 FCGR2BP31994 310 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 HAAOP46952 286 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 REG1BP48304 166 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 CX3CR1P49238 355 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 CNN1P51911 297 aaKnown RBP2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 GRB2P62993 217 aaKnown RBP2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 HTD2P86397 168 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 ARL16Q0P5N6 197 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 BNIP1Q12981 228 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 FHL1Q13642 323 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 ACTBL2Q562R1 376 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 LCN1P1Q5VSP4 162 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 ZNF660Q6AZW8 331 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 DCXRQ7Z4W1 244 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 ZNF573Q86YE8 665 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 BATF2Q8N1L9 274 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 SLC35F6Q8N357 371 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 C15orf53Q8NAA6 179 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 DMBX1Q8NFW5 382 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 GPR32P1Q8NGA4 272 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 OR8B12Q8NGG6 310 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 OR4D11Q8NGI4 311 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 FAM81AQ8TBF8 368 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 LZICQ8WZA0 190 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 LGALS12Q96DT0 336 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 POLR2J2Q9GZM3 115 aaKnown RBP2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 CHST6Q9GZX3 395 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 POLR2J3Q9H1A7 115 aaKnown RBP2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 NIPAL2Q9H841 368 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 CENPMQ9NSP4 180 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 CNOT2Q9NZN8 540 aaKnown RBP2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 RIMS3Q9UJD0 308 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 B9D1Q9UPM9 204 aa2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 STRAPQ9Y3F4 350 aaKnown RBP2.87□□□□□ -1.95
ECHDC1-211ENST00000460558 NBDYA0A0U1RRE5 68 aa2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 SRRM4A7MD48 611 aaKnown RBP2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 MPTX1A8MV57 137 aa2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 M0QX08 132 aa2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 CXCR6O00574 342 aa2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 NDUFB2O95178 105 aa2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 HAND1O96004 215 aa2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 IGHV3-7P01780 117 aa2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 RPL35AP18077 110 aaKnown RBP2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 PPIBP23284 216 aaKnown RBP2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 IFNA8P32881 189 aa2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 RPS27P42677 84 aaKnown RBP2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 GNG10P50151 68 aa2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 CRIP2P52943 208 aaPredicted RBP2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 ZNF121P58317 390 aaPredicted RBP2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 ERVK11-1P61568 191 aa2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 LRRC36Q1X8D7 754 aa2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 IZUMO4Q1ZYL8 232 aa2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 ZBED5Q49AG3 693 aa2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 UTF1Q5T230 341 aa2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 PLCXD3Q63HM9 321 aa2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 DHRS11Q6UWP2 260 aa2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 ASCL4Q6XD76 172 aa2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 TRPT1Q86TN4 253 aaKnown RBP2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 CROCCP3Q8IVE0 287 aa2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 STHQ8IWL8 128 aa2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 NRMQ8IXM6 262 aa2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 TMEM61Q8N0U2 210 aa2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 SLC37A3Q8NCC5 494 aa2.86□□□□□ -1.95
ECHDC1-211ENST00000460558 TMEM104Q8NE00 496 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms