RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 URM1Q9BTM9 101 aaKnown RBP8.62□□□□□ -1.03
USP39-210ENST00000459775 TM2D1Q9BX74 207 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 CHST6Q9GZX3 395 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 HES4Q9HCC6 221 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 RDH8Q9NYR8 311 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 RNF7Q9UBF6 113 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 KLK11Q9UBX7 282 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 ZNF230Q9UIE0 474 aaPredicted RBP8.62□□□□□ -1.03
USP39-210ENST00000459775 APCP25054 2843 aa8.61□□□□□ -1.03
USP39-210ENST00000459775 IGKV1D-17A0A075B6S4 117 aa8.61□□□□□ -1.03
USP39-210ENST00000459775 TRAV24A0A0B4J272 114 aa8.61□□□□□ -1.03
USP39-210ENST00000459775 IGHV1-69-2A0A0G2JMI3 117 aa8.61□□□□□ -1.03
USP39-210ENST00000459775 SRRM5B3KS81 715 aa8.61□□□□□ -1.03
USP39-210ENST00000459775 SIGLEC5O15389 551 aa8.61□□□□□ -1.03
USP39-210ENST00000459775 ST8SIA3O43173 380 aa8.61□□□□□ -1.03
USP39-210ENST00000459775 PSPNO60542 156 aa8.61□□□□□ -1.03
USP39-210ENST00000459775 GYPAP02724 150 aa8.61□□□□□ -1.03
USP39-210ENST00000459775 CSF3P09919 207 aa8.61□□□□□ -1.03
USP39-210ENST00000459775 NPSP0C0P6 89 aa8.61□□□□□ -1.03
USP39-210ENST00000459775 DDTP30046 118 aa8.61□□□□□ -1.03
USP39-210ENST00000459775 CARTPTQ16568 116 aa8.61□□□□□ -1.03
USP39-210ENST00000459775 AVPI1Q5T686 147 aa8.61□□□□□ -1.03
USP39-210ENST00000459775 Q6P435 159 aa8.61□□□□□ -1.03
USP39-210ENST00000459775 FAM90A1Q86YD7 464 aa8.61□□□□□ -1.03
USP39-210ENST00000459775 Q8N402 240 aa8.61□□□□□ -1.03
USP39-210ENST00000459775 GVQW1Q8N7I0 195 aa8.61□□□□□ -1.03
USP39-210ENST00000459775 ZFAND1Q8TCF1 268 aa8.61□□□□□ -1.03
USP39-210ENST00000459775 S100ZQ8WXG8 99 aa8.61□□□□□ -1.03
USP39-210ENST00000459775 NARS2Q96I59 477 aaKnown RBP8.61□□□□□ -1.03
USP39-210ENST00000459775 PECRQ9BY49 303 aa8.61□□□□□ -1.03
USP39-210ENST00000459775 TRBV7-9A0A0J9YWB2 115 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 OR2H2O95918 312 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 TCRBP04435 133 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 PSG2P11465 335 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 ZNF44P15621 663 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 HIST1H1DP16402 221 aaKnown RBP8.6□□□□□ -1.03
USP39-210ENST00000459775 CHATP28329 748 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 GABRA2P47869 451 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 PPOXP50336 477 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 LEMD1Q68G75 181 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 Q6ZPA2 131 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 C9orf62Q8N4C0 152 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 ZNF383Q8NA42 475 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 TMEM106BQ9NUM4 274 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 PLEKHJ1Q9NW61 149 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 TMEM178BH3BS89 294 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 MFNGO00587 321 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 DEGS1O15121 323 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 SNAI2O43623 268 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 HAND1O96004 215 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 IFNA5P01569 189 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 PKIAP61925 76 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 MZT1Q08AG7 82 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 LRRC75A-AS1Q8N1F1 130 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 TPRX1Q8N7U7 411 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 SUMF2Q8NBJ7 301 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 ZNRF1Q8ND25 227 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 TMEM185AQ8NFB2 350 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 Q8TCH9 128 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 CCL13Q99616 98 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 AK3Q9UIJ7 227 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 DYSFO75923 2080 aa8.6□□□□□ -1.03
USP39-210ENST00000459775 DNASE2O00115 360 aaPredicted RBP8.59□□□□□ -1.03
USP39-210ENST00000459775 RLN2P04090 185 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 CD5P06127 495 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 MNDAP41218 407 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 CRYBA4P53673 196 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 DHODHQ02127 395 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 COL10A1Q03692 680 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 ATXN7L3Q14CW9 347 aaPredicted RBP8.59□□□□□ -1.03
USP39-210ENST00000459775 OR52W1Q6IF63 320 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 LYPD2Q6UXB3 125 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 FAM216BQ8N7L0 139 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 NECAP1Q8NC96 275 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 OR4S1Q8NGB4 309 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 IGFBPL1Q8WX77 278 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 AKR1E2Q96JD6 320 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 HARBI1Q96MB7 349 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 CCL19Q99731 98 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 THAP7Q9BT49 309 aaPredicted RBP8.59□□□□□ -1.03
USP39-210ENST00000459775 C1orf43Q9BWL3 253 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 MCUBQ9NWR8 336 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 NLKQ9UBE8 527 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 WIPI2Q9Y4P8 454 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 RAI1Q7Z5J4 1906 aaPredicted RBP8.59□□□□□ -1.03
USP39-210ENST00000459775 DSCAMO60469 2012 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 IGKV1D-8A0A087WSZ0 117 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 OVOL3O00110 214 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 ORC5O43913 435 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 FCN3O75636 299 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 RP2O75695 350 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 IGHV4-39P01824 125 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 IL7P13232 177 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 IRF2P14316 349 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 FUT3P21217 361 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 PRDX2P32119 198 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 CFHR2P36980 270 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 ZNF146Q15072 292 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 FAAP20Q6NZ36 180 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 C20orf204Q6ZNR8 217 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms