RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 SNX22Q96L94 193 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 ALKBH3Q96Q83 286 aaPredicted RBP7.24□□□□□ -1.25
VPS50-208ENST00000458707 RSG1Q9BU20 258 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 FGF23Q9GZV9 251 aaPredicted RBP7.24□□□□□ -1.25
VPS50-208ENST00000458707 PRO1933Q9H354 126 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 VSIRQ9H7M9 311 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 AKIRIN1Q9H9L7 192 aaPredicted RBP7.24□□□□□ -1.25
VPS50-208ENST00000458707 DOCK10Q96BY6 2186 aa7.23□□□□□ -1.25
VPS50-208ENST00000458707 LRP5LA4QPB2 252 aa7.23□□□□□ -1.25
VPS50-208ENST00000458707 NPIPB11E5RHQ5 1161 aa7.23□□□□□ -1.25
VPS50-208ENST00000458707 J3QW42 95 aa7.23□□□□□ -1.25
VPS50-208ENST00000458707 NXPH3O95157 252 aa7.23□□□□□ -1.25
VPS50-208ENST00000458707 GZMBP10144 247 aa7.23□□□□□ -1.25
VPS50-208ENST00000458707 COX6A1P12074 109 aa7.23□□□□□ -1.25
VPS50-208ENST00000458707 S100GP29377 79 aa7.23□□□□□ -1.25
VPS50-208ENST00000458707 SRD5A2P31213 254 aa7.23□□□□□ -1.25
VPS50-208ENST00000458707 MDH2P40926 338 aaKnown RBP7.23□□□□□ -1.25
VPS50-208ENST00000458707 CDC34P49427 236 aaPredicted RBP7.23□□□□□ -1.25
VPS50-208ENST00000458707 PDLIM4P50479 330 aa7.23□□□□□ -1.25
VPS50-208ENST00000458707 TMEM267Q0VDI3 215 aaPredicted RBP7.23□□□□□ -1.25
VPS50-208ENST00000458707 MRPL49Q13405 166 aaKnown RBP7.23□□□□□ -1.25
VPS50-208ENST00000458707 LRRC75BQ2VPJ9 315 aa7.23□□□□□ -1.25
VPS50-208ENST00000458707 CEACAM16Q2WEN9 425 aa7.23□□□□□ -1.25
VPS50-208ENST00000458707 TMEM41BQ5BJD5 291 aa7.23□□□□□ -1.25
VPS50-208ENST00000458707 ZNF468Q5VIY5 522 aaPredicted RBP7.23□□□□□ -1.25
VPS50-208ENST00000458707 CYP2G1PQ6ZSU1 146 aa7.23□□□□□ -1.25
VPS50-208ENST00000458707 HAPLN4Q86UW8 402 aa7.23□□□□□ -1.25
VPS50-208ENST00000458707 MRPL30Q8TCC3 161 aaKnown RBP7.23□□□□□ -1.25
VPS50-208ENST00000458707 PINX1Q96BK5 328 aaKnown RBP7.23□□□□□ -1.25
VPS50-208ENST00000458707 GPR87Q9BY21 358 aa7.23□□□□□ -1.25
VPS50-208ENST00000458707 GPR35Q9HC97 309 aa7.23□□□□□ -1.25
VPS50-208ENST00000458707 LRFN1Q9P244 771 aa7.23□□□□□ -1.25
VPS50-208ENST00000458707 NAT8Q9UHE5 227 aa7.23□□□□□ -1.25
VPS50-208ENST00000458707 RNF24Q9Y225 148 aa7.23□□□□□ -1.25
VPS50-208ENST00000458707 OR2W1Q9Y3N9 320 aa7.23□□□□□ -1.25
VPS50-208ENST00000458707 DIDO1Q9BTC0 2240 aaKnown RBP7.23□□□□□ -1.25
VPS50-208ENST00000458707 SPEGQ15772 3267 aa7.23□□□□□ -1.25
VPS50-208ENST00000458707 SDK1Q7Z5N4 2213 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 LY6G6EA0A0G2JKS1 128 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 H3BP45 60 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 SYNGR2O43760 224 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 IFNA1P01562 189 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 HLA-HP01893 362 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 AMBPP02760 352 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 UMODP07911 640 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 FGF5P12034 268 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 KLF3P57682 345 aaPredicted RBP7.22□□□□□ -1.25
VPS50-208ENST00000458707 ARF6P62330 175 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 CCL7P80098 99 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 ARL16Q0P5N6 197 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 PRDX4Q13162 271 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 CEACAM21Q3KPI0 293 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 C4orf17Q53FE4 359 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 GUSBP11Q6P575 273 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 LCN15Q6UWW0 184 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 Q6ZRM9 215 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 MYPOPQ86VE0 399 aaPredicted RBP7.22□□□□□ -1.25
VPS50-208ENST00000458707 MED12LQ86YW9 2145 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 OR1P1Q8NH06 330 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 ADGRG7Q96K78 797 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 CCDC74BQ96LY2 380 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 STRADBQ9C0K7 418 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 MTCH1Q9NZJ7 389 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 TIMM9Q9Y5J7 89 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 U3KQA8 63 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 ZDBF2Q9HCK1 2354 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 GTF3C1Q12789 2109 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 ZFHX4Q86UP3 3567 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 PTPRBP23467 1997 aa7.22□□□□□ -1.25
VPS50-208ENST00000458707 MAP1LC3B2A6NCE7 125 aa7.21□□□□□ -1.25
VPS50-208ENST00000458707 CEBPZOSA8MTT3 80 aa7.21□□□□□ -1.25
VPS50-208ENST00000458707 SLC33A1O00400 549 aaPredicted RBP7.21□□□□□ -1.25
VPS50-208ENST00000458707 TNFSF12O43508 249 aa7.21□□□□□ -1.25
VPS50-208ENST00000458707 SS18L1O75177 396 aaPredicted RBP7.21□□□□□ -1.25
VPS50-208ENST00000458707 KBTBD11O94819 623 aa7.21□□□□□ -1.25
VPS50-208ENST00000458707 GCGP01275 180 aa7.21□□□□□ -1.25
VPS50-208ENST00000458707 IGKV1-39P01597 117 aa7.21□□□□□ -1.25
VPS50-208ENST00000458707 IGKV1D-39P04432 117 aa7.21□□□□□ -1.25
VPS50-208ENST00000458707 PSG2P11465 335 aa7.21□□□□□ -1.25
VPS50-208ENST00000458707 FGF8P55075 233 aaPredicted RBP7.21□□□□□ -1.25
VPS50-208ENST00000458707 MLF1P58340 268 aa7.21□□□□□ -1.25
VPS50-208ENST00000458707 SELENOTP62341 195 aa7.21□□□□□ -1.25
VPS50-208ENST00000458707 HBG1P69891 147 aa7.21□□□□□ -1.25
VPS50-208ENST00000458707 HBG2P69892 147 aa7.21□□□□□ -1.25
VPS50-208ENST00000458707 IGF2-ASQ6U949 168 aa7.21□□□□□ -1.25
VPS50-208ENST00000458707 C20orf204Q6ZNR8 217 aa7.21□□□□□ -1.25
VPS50-208ENST00000458707 MKXQ8IYA7 352 aa7.21□□□□□ -1.25
VPS50-208ENST00000458707 BATF2Q8N1L9 274 aa7.21□□□□□ -1.25
VPS50-208ENST00000458707 OR51G1Q8NGK1 321 aa7.21□□□□□ -1.25
VPS50-208ENST00000458707 NANOS1Q8WY41 292 aaKnown RBP7.21□□□□□ -1.25
VPS50-208ENST00000458707 ACY3Q96HD9 319 aa7.21□□□□□ -1.25
VPS50-208ENST00000458707 MAP1LC3BQ9GZQ8 125 aa7.21□□□□□ -1.25
VPS50-208ENST00000458707 WDR61Q9GZS3 305 aaKnown RBP7.21□□□□□ -1.25
VPS50-208ENST00000458707 PLK3Q9H4B4 646 aa7.21□□□□□ -1.25
VPS50-208ENST00000458707 PSENENQ9NZ42 101 aa7.21□□□□□ -1.25
VPS50-208ENST00000458707 DOCK11Q5JSL3 2073 aa7.21□□□□□ -1.25
VPS50-208ENST00000458707 G3V3Y1 287 aa7.21□□□□□ -1.26
VPS50-208ENST00000458707 TMEM250H0YL14 139 aa7.21□□□□□ -1.26
VPS50-208ENST00000458707 TRAPPC2LH3BP13 241 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms