RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 TNRC6AQ8NDV7 1962 aaKnown RBP11.93□□□□□ -0.5
SCFD1-203ENST00000458591 TRBV6-6A0A0A6YYG2 114 aa11.93□□□□□ -0.5
SCFD1-203ENST00000458591 WNT9BO14905 357 aa11.93□□□□□ -0.5
SCFD1-203ENST00000458591 WISP2O76076 250 aa11.93□□□□□ -0.5
SCFD1-203ENST00000458591 LY86O95711 162 aa11.93□□□□□ -0.5
SCFD1-203ENST00000458591 CYB5R3P00387 301 aaPredicted RBP11.93□□□□□ -0.5
SCFD1-203ENST00000458591 PGA5P0DJD9 388 aa11.93□□□□□ -0.5
SCFD1-203ENST00000458591 RPL30P62888 115 aaKnown RBP11.93□□□□□ -0.5
SCFD1-203ENST00000458591 ZNF816Q0VGE8 651 aaPredicted RBP11.93□□□□□ -0.5
SCFD1-203ENST00000458591 LRRC75BQ2VPJ9 315 aa11.93□□□□□ -0.5
SCFD1-203ENST00000458591 PEAR1Q5VY43 1037 aaPredicted RBP11.93□□□□□ -0.5
SCFD1-203ENST00000458591 WDR25Q64LD2 544 aaPredicted RBP11.93□□□□□ -0.5
SCFD1-203ENST00000458591 ZNF826PQ6ZT77 177 aa11.93□□□□□ -0.5
SCFD1-203ENST00000458591 FGFRL1Q8N441 504 aa11.93□□□□□ -0.5
SCFD1-203ENST00000458591 OR1L1Q8NH94 360 aa11.93□□□□□ -0.5
SCFD1-203ENST00000458591 SPRY4Q9C004 299 aa11.93□□□□□ -0.5
SCFD1-203ENST00000458591 RIMS4Q9H426 269 aaPredicted RBP11.93□□□□□ -0.5
SCFD1-203ENST00000458591 PRDM13Q9H4Q3 707 aa11.93□□□□□ -0.5
SCFD1-203ENST00000458591 KRASP01116 189 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 HOXA6P31267 233 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 G6PCP35575 357 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 MDH2P40926 338 aaKnown RBP11.92□□□□□ -0.5
SCFD1-203ENST00000458591 MEOX1P50221 254 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 RND2P52198 227 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 ZNF497Q6ZNH5 498 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 OR52L2PQ8NGH6 319 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 B4GALT7Q9UBV7 327 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 CLN8Q9UBY8 286 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 MPC1Q9Y5U8 109 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 CFAP47Q6ZTR5 3102 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 OR5B21A6NL26 309 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 TSTD3H0UI37 97 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 GALR2O43603 387 aaPredicted RBP11.92□□□□□ -0.5
SCFD1-203ENST00000458591 PSPNO60542 156 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 FABP4P15090 132 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 SSTP61278 116 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 RNFT1Q5M7Z0 435 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 DCAF10Q5QP82 559 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 BTNL3Q6UXE8 466 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 RPP25LQ8N5L8 163 aaKnown RBP11.92□□□□□ -0.5
SCFD1-203ENST00000458591 TPRX1Q8N7U7 411 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 WDR61Q9GZS3 305 aaKnown RBP11.92□□□□□ -0.5
SCFD1-203ENST00000458591 GP6Q9HCN6 339 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 UFSP2Q9NUQ7 469 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 PRR14LQ5THK1 2151 aa11.92□□□□□ -0.5
SCFD1-203ENST00000458591 MAP1LC3B2A6NCE7 125 aa11.91□□□□□ -0.5
SCFD1-203ENST00000458591 J3QT63 122 aa11.91□□□□□ -0.5
SCFD1-203ENST00000458591 CLDN1O95832 211 aa11.91□□□□□ -0.5
SCFD1-203ENST00000458591 SLC25A6P12236 298 aa11.91□□□□□ -0.5
SCFD1-203ENST00000458591 ACP1P24666 158 aa11.91□□□□□ -0.5
SCFD1-203ENST00000458591 PKIAP61925 76 aa11.91□□□□□ -0.5
SCFD1-203ENST00000458591 ACSM6Q6P461 480 aa11.91□□□□□ -0.5
SCFD1-203ENST00000458591 BCL2L2Q92843 193 aaPredicted RBP11.91□□□□□ -0.5
SCFD1-203ENST00000458591 MAP1LC3BQ9GZQ8 125 aa11.91□□□□□ -0.5
SCFD1-203ENST00000458591 PRO3102Q9H379 93 aa11.91□□□□□ -0.5
SCFD1-203ENST00000458591 SDF2L1Q9HCN8 221 aa11.91□□□□□ -0.5
SCFD1-203ENST00000458591 KNTC1P50748 2209 aa11.91□□□□□ -0.5
SCFD1-203ENST00000458591 NXPH2O95156 264 aa11.91□□□□□ -0.5
SCFD1-203ENST00000458591 OPN1MWP04001 364 aa11.91□□□□□ -0.5
SCFD1-203ENST00000458591 OPN1MW2P0DN77 364 aa11.91□□□□□ -0.5
SCFD1-203ENST00000458591 OPN1MW3P0DN78 364 aa11.91□□□□□ -0.5
SCFD1-203ENST00000458591 BMP5P22003 454 aa11.91□□□□□ -0.5
SCFD1-203ENST00000458591 OR3A1P47881 315 aa11.91□□□□□ -0.5
SCFD1-203ENST00000458591 IDH3GP51553 393 aaPredicted RBP11.91□□□□□ -0.5
SCFD1-203ENST00000458591 MBD3L1Q8WWY6 194 aa11.91□□□□□ -0.5
SCFD1-203ENST00000458591 GTF3AQ92664 365 aaKnown RBP11.91□□□□□ -0.5
SCFD1-203ENST00000458591 LSM10Q969L4 123 aaKnown RBP11.91□□□□□ -0.5
SCFD1-203ENST00000458591 ZDHHC16Q969W1 377 aa11.91□□□□□ -0.5
SCFD1-203ENST00000458591 PLPPR2Q96GM1 343 aa11.91□□□□□ -0.5
SCFD1-203ENST00000458591 P2RX4Q99571 388 aa11.91□□□□□ -0.5
SCFD1-203ENST00000458591 SLC25A22Q9H936 323 aa11.91□□□□□ -0.5
SCFD1-203ENST00000458591 IFNA1P01562 189 aa11.9□□□□□ -0.5
SCFD1-203ENST00000458591 IFNA10P01566 189 aa11.9□□□□□ -0.5
SCFD1-203ENST00000458591 SLC38A11Q08AI6 406 aa11.9□□□□□ -0.5
SCFD1-203ENST00000458591 RTP5Q14D33 572 aa11.9□□□□□ -0.5
SCFD1-203ENST00000458591 Q6ZR03 302 aa11.9□□□□□ -0.5
SCFD1-203ENST00000458591 GCNT2Q8N0V5 402 aa11.9□□□□□ -0.5
SCFD1-203ENST00000458591 RHOVQ96L33 236 aa11.9□□□□□ -0.5
SCFD1-203ENST00000458591 PACRGQ96M98 296 aaPredicted RBP11.9□□□□□ -0.5
SCFD1-203ENST00000458591 CTDSP1Q9GZU7 261 aa11.9□□□□□ -0.5
SCFD1-203ENST00000458591 TMEM9BQ9NQ34 198 aa11.9□□□□□ -0.5
SCFD1-203ENST00000458591 FZR1Q9UM11 496 aa11.9□□□□□ -0.5
SCFD1-203ENST00000458591 COL27A1Q8IZC6 1860 aaPredicted RBP11.9□□□□□ -0.5
SCFD1-203ENST00000458591 IGHV3-43A0A0B4J1X8 118 aa11.9□□□□□ -0.51
SCFD1-203ENST00000458591 SMCO3A2RU48 225 aa11.9□□□□□ -0.51
SCFD1-203ENST00000458591 ZNF737O75373 536 aa11.9□□□□□ -0.51
SCFD1-203ENST00000458591 LYZL6O75951 148 aa11.9□□□□□ -0.51
SCFD1-203ENST00000458591 IGHV3-43DP0DP04 118 aa11.9□□□□□ -0.51
SCFD1-203ENST00000458591 COL8A2P25067 703 aa11.9□□□□□ -0.51
SCFD1-203ENST00000458591 BRWD1-AS2P59051 145 aa11.9□□□□□ -0.51
SCFD1-203ENST00000458591 PMP22Q01453 160 aa11.9□□□□□ -0.51
SCFD1-203ENST00000458591 AESQ08117 197 aa11.9□□□□□ -0.51
SCFD1-203ENST00000458591 ADIRFQ15847 76 aa11.9□□□□□ -0.51
SCFD1-203ENST00000458591 TMPRSS7Q7RTY8 843 aa11.9□□□□□ -0.51
SCFD1-203ENST00000458591 LINC00596Q86U02 117 aa11.9□□□□□ -0.51
SCFD1-203ENST00000458591 TAF15Q92804 592 aaKnown RBP eCLIP11.9□□□□□ -0.516e-10■■■□□ 17.7
SCFD1-203ENST00000458591 RPUSD4Q96CM3 377 aaKnown RBP11.9□□□□□ -0.51
SCFD1-203ENST00000458591 SNX22Q96L94 193 aa11.9□□□□□ -0.51
SCFD1-203ENST00000458591 PSMG3Q9BT73 122 aaPredicted RBP11.9□□□□□ -0.51
SCFD1-203ENST00000458591 PKIBQ9C010 78 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms