RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 FRYQ5TBA9 3013 aa10.04□□□□□ -0.8
SYNE2-207ENST00000458046 NPIPB5A8MRT5 1133 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 C9J4A7 227 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 RPS18P62269 152 aaKnown RBP10.03□□□□□ -0.8
SYNE2-207ENST00000458046 CEACAM16Q2WEN9 425 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 FBXW12Q6X9E4 464 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 Q6ZPA2 131 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 LIAT1Q6ZQX7 453 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 M1APQ8TC57 530 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 NPIPB3Q92617 1050 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 ZNF442Q9H7R0 627 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 SH2D2AQ9NP31 389 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 SIT1Q9Y3P8 196 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 OR2J3O76001 311 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 OR7C1O76099 320 aaPredicted RBP10.03□□□□□ -0.8
SYNE2-207ENST00000458046 PRH1P02810 166 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 CST2P09228 141 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 DAOP14920 347 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 AADACP22760 399 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 NPBWR2P48146 333 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 CRYBA4P53673 196 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 B3GALT5-AS1P59052 145 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 TGIF1Q15583 401 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 FAM159AQ6UWV7 190 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 SEM1Q6ZVN7 128 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 CALHM1Q8IU99 346 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 CCDC54Q8NEL0 328 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 NAT6Q93015 286 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 CLDN23Q96B33 292 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 GPHA2Q96T91 129 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 RFNGQ9Y644 331 aa10.03□□□□□ -0.8
SYNE2-207ENST00000458046 NKX6-3A6NJ46 265 aa10.02□□□□□ -0.8
SYNE2-207ENST00000458046 ZNF587BE7ETH6 402 aa10.02□□□□□ -0.8
SYNE2-207ENST00000458046 S100PP25815 95 aa10.02□□□□□ -0.8
SYNE2-207ENST00000458046 ERVK11-1P61568 191 aa10.02□□□□□ -0.8
SYNE2-207ENST00000458046 SKA3Q8IX90 412 aa10.02□□□□□ -0.8
SYNE2-207ENST00000458046 MSI2Q96DH6 328 aaKnown RBP10.02□□□□□ -0.8
SYNE2-207ENST00000458046 GALNT14Q96FL9 552 aa10.02□□□□□ -0.8
SYNE2-207ENST00000458046 C18orf12Q96KH6 178 aa10.02□□□□□ -0.8
SYNE2-207ENST00000458046 TP53RKQ96S44 253 aa10.02□□□□□ -0.8
SYNE2-207ENST00000458046 FOXB1Q99853 325 aa10.02□□□□□ -0.8
SYNE2-207ENST00000458046 ZNF286AQ9HBT8 521 aa10.02□□□□□ -0.8
SYNE2-207ENST00000458046 SMCO4Q9NRQ5 59 aa10.02□□□□□ -0.8
SYNE2-207ENST00000458046 SLC7A11Q9UPY5 501 aa10.02□□□□□ -0.8
SYNE2-207ENST00000458046 ZFHX4Q86UP3 3567 aa10.02□□□□□ -0.81
SYNE2-207ENST00000458046 BORCS7-ASMTA0A0B4J1R7 106 aa10.02□□□□□ -0.81
SYNE2-207ENST00000458046 OR6C6A6NF89 314 aa10.02□□□□□ -0.81
SYNE2-207ENST00000458046 GJE1A6NN92 205 aa10.02□□□□□ -0.81
SYNE2-207ENST00000458046 PATE3B3GLJ2 98 aa10.02□□□□□ -0.81
SYNE2-207ENST00000458046 GPR137BO60478 399 aa10.02□□□□□ -0.81
SYNE2-207ENST00000458046 TCN2P20062 427 aa10.02□□□□□ -0.81
SYNE2-207ENST00000458046 DUSP1P28562 367 aa10.02□□□□□ -0.81
SYNE2-207ENST00000458046 SNCAP37840 140 aa10.02□□□□□ -0.81
SYNE2-207ENST00000458046 IL13RA2Q14627 380 aa10.02□□□□□ -0.81
SYNE2-207ENST00000458046 GGNQ86UU5 652 aa10.02□□□□□ -0.81
SYNE2-207ENST00000458046 OR4C5Q8NGB2 326 aa10.02□□□□□ -0.81
SYNE2-207ENST00000458046 OR2Y1Q8NGV0 311 aa10.02□□□□□ -0.81
SYNE2-207ENST00000458046 ISOC2Q96AB3 205 aa10.02□□□□□ -0.81
SYNE2-207ENST00000458046 IP6K3Q96PC2 410 aa10.02□□□□□ -0.81
SYNE2-207ENST00000458046 ATG101Q9BSB4 218 aa10.02□□□□□ -0.81
SYNE2-207ENST00000458046 OR2H1Q9GZK4 316 aa10.02□□□□□ -0.81
SYNE2-207ENST00000458046 RCL1Q9Y2P8 373 aaKnown RBP10.02□□□□□ -0.81
SYNE2-207ENST00000458046 TIMM10BQ9Y5J6 103 aa10.02□□□□□ -0.81
SYNE2-207ENST00000458046 RAB29O14966 203 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 P04436 131 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 DANCRP0C864 163 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 FUT6P51993 359 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 PTTG1IPP53801 180 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 UCNP55089 124 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 HERV-K104P61576 105 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 SNRPEP62304 92 aaKnown RBP10.01□□□□□ -0.81
SYNE2-207ENST00000458046 MRPS11P82912 194 aaKnown RBP10.01□□□□□ -0.81
SYNE2-207ENST00000458046 C9orf135Q5VTT2 229 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 ACSM6Q6P461 480 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 SLC23A3Q6PIS1 610 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 SLC25A26Q70HW3 274 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 LGI3Q8N145 548 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 SLC35G3Q8N808 338 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 OR10D3Q8NH80 312 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 LYPD6BQ8NI32 183 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 ABHD3Q8WU67 409 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 JMJD8Q96S16 334 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 SYT3Q9BQG1 590 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 SUCNR1Q9BXA5 334 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 hCG_38984A0A1B0GV85 526 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 M0R036 132 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 PDCD6O75340 191 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 TMEM42Q69YG0 159 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 RSG1Q9BU20 258 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 PILRBQ9UKJ0 227 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 FBXO7Q9Y3I1 522 aa10.01□□□□□ -0.81
SYNE2-207ENST00000458046 SEC11BP0C7V7 166 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 SPINK2P20155 84 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 OMGP23515 440 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 FOLR3P41439 243 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 GLP1RP43220 463 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 P2RY1P47900 373 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 UQCRFS1P47985 274 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 CLDN15P56746 228 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 CLINT1Q14677 625 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms