RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 ZNF835Q9Y2P0 537 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 IGF2RP11717 2491 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 NDUFB3O43676 98 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 OTX1P32242 354 aaPredicted RBP4.58□□□□□ -1.68
CSMD3-204ENST00000455883 INO80CQ6PI98 192 aaPredicted RBP4.58□□□□□ -1.68
CSMD3-204ENST00000455883 GCSAMQ8N6F7 178 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 TMEM40Q8WWA1 233 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 LTB4R2Q9NPC1 389 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 TRBV20-1A0A075B6N2 111 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 TRAV34A0A0B4J273 112 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 SNURFLB1AK76 121 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 K7N7A8 449 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 EDIL3O43854 480 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 ZNF735P0CB33 412 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 CLDN12P56749 244 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 TNFRSF14Q92956 283 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 MS4A3Q96HJ5 214 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 OR2D2Q9H210 308 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 CENPEQ02224 2701 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 TRBV5-3A0A0A0MS03 114 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 K7EMI3 77 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 CDIPTO14735 213 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 TMPRSS11DO60235 418 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 CLDN14O95500 239 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 CTSCP53634 463 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 GAB4Q2WGN9 574 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 OR10J3Q5JRS4 329 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 C8orf82Q6P1X6 216 aaPredicted RBP4.58□□□□□ -1.68
CSMD3-204ENST00000455883 ORAOV1Q8WV07 137 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 PPP1R3EQ9H7J1 279 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 A1L4Q6 167 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 TMEM249Q2WGJ8 235 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 COX20Q5RI15 118 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 DNAJB12Q9NXW2 375 aaKnown RBP4.57□□□□□ -1.68
CSMD3-204ENST00000455883 C5AR2Q9P296 337 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 FOXD3Q9UJU5 478 aaPredicted RBP4.57□□□□□ -1.68
CSMD3-204ENST00000455883 NPIPB7O75200 414 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 RPL11P62913 178 aaKnown RBP4.57□□□□□ -1.68
CSMD3-204ENST00000455883 PDE6HQ13956 83 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 ZNF362Q5T0B9 420 aaPredicted RBP4.57□□□□□ -1.68
CSMD3-204ENST00000455883 TMPRSS9Q7Z410 1059 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 METTL26Q96S19 204 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 SPXQ9BT56 116 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 PARLQ9H300 379 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 PLSCR2Q9NRY7 297 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 COA3Q9Y2R0 106 aaPredicted RBP4.57□□□□□ -1.68
CSMD3-204ENST00000455883 PXMP4Q9Y6I8 212 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 DPRXA6NFQ7 191 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 HYPMO75409 117 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 CD1BP29016 333 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 FAM189BP81408 668 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 ZNF355PQ9NSJ1 428 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 A0A1W2PR48 441 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 SNRPNP63162 240 aaKnown RBP4.57□□□□□ -1.68
CSMD3-204ENST00000455883 RNFT1Q5M7Z0 435 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 ZNF385CQ66K41 422 aaPredicted RBP4.57□□□□□ -1.68
CSMD3-204ENST00000455883 FBXO46Q6PJ61 603 aaPredicted RBP4.57□□□□□ -1.68
CSMD3-204ENST00000455883 FBXL14Q8N1E6 418 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 OR2K2Q8NGT1 345 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 CHTOPQ9Y3Y2 248 aaKnown RBP4.57□□□□□ -1.68
CSMD3-204ENST00000455883 MKRN2OSH3BPM6 223 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 NUTF2P61970 127 aaKnown RBP4.57□□□□□ -1.68
CSMD3-204ENST00000455883 GNG7O60262 68 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 STARD6P59095 220 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 FAM78BQ5VT40 261 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 OR4C13Q8NGP0 309 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 GNB1LQ9BYB4 327 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 OR4C45A6NMZ5 311 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 NRG2O14511 850 aaPredicted RBP4.57□□□□□ -1.68
CSMD3-204ENST00000455883 MUC1P15941 1255 aaPredicted RBP4.57□□□□□ -1.68
CSMD3-204ENST00000455883 CA6P23280 308 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 UCNP55089 124 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 SPATA45Q537H7 98 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 FAM27BQ5VT28 67 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 C10orf111Q8N326 155 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 OR10J6PQ8NGY7 276 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 HEXA-AS1Q9H8Q6 139 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 UBE2CO00762 179 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 FTH1P19P0C7X4 201 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 ZP4Q12836 540 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 ORMDL2Q53FV1 153 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 TMEM78Q5T7P6 136 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 LIMS2Q7Z4I7 341 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 OR8I2Q8N0Y5 310 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 LINC01465Q8N7H1 131 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 FSCN3Q9NQT6 498 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 J3QT63 122 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 CKS2P33552 79 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 MFAP2P55001 183 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 SRYQ05066 204 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 MESTQ5EB52 335 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 Q8N9G6 341 aaPredicted RBP4.57□□□□□ -1.68
CSMD3-204ENST00000455883 PFN4Q8NHR9 129 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 ZNF519Q8TB69 540 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 TRBV24-1A0A075B6N3 115 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.57□□□□□ -1.68
CSMD3-204ENST00000455883 C5orf49A4QMS7 147 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 OR2J3O76001 311 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 SLC25A48Q6ZT89 311 aaKnown RBP4.57□□□□□ -1.68
CSMD3-204ENST00000455883 ETFBKMTQ8IXQ9 262 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms