RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 TSPAN9O75954 239 aa22.41■■□□□ 1.18
SMARCC1-203ENST00000454240 FAM106CPP0CH98 169 aa22.41■■□□□ 1.18
SMARCC1-203ENST00000454240 ZNF833PQ6ZTB9 187 aa22.41■■□□□ 1.18
SMARCC1-203ENST00000454240 HOGA1Q86XE5 327 aa22.41■■□□□ 1.18
SMARCC1-203ENST00000454240 GVQW1Q8N7I0 195 aa22.41■■□□□ 1.18
SMARCC1-203ENST00000454240 OR4F5Q8NH21 305 aa22.41■■□□□ 1.18
SMARCC1-203ENST00000454240 ANXA10Q9UJ72 324 aa22.41■■□□□ 1.18
SMARCC1-203ENST00000454240 SAA2-SAA4A0A096LPE2 208 aa22.4■■□□□ 1.18
SMARCC1-203ENST00000454240 RAB29O14966 203 aa22.4■■□□□ 1.18
SMARCC1-203ENST00000454240 SNRNP70P08621 437 aaKnown RBP22.4■■□□□ 1.18
SMARCC1-203ENST00000454240 SAA2P0DJI9 122 aaPredicted RBP22.4■■□□□ 1.18
SMARCC1-203ENST00000454240 CBX5P45973 191 aa22.4■■□□□ 1.18
SMARCC1-203ENST00000454240 OR3A3P47888 321 aa22.4■■□□□ 1.18
SMARCC1-203ENST00000454240 CNIH2Q6PI25 160 aa22.4■■□□□ 1.18
SMARCC1-203ENST00000454240 C16orf82Q7Z2V1 217 aa22.4■■□□□ 1.18
SMARCC1-203ENST00000454240 ZNF251Q9BRH9 671 aa22.4■■□□□ 1.18
SMARCC1-203ENST00000454240 C16orf95Q9H693 158 aa22.4■■□□□ 1.18
SMARCC1-203ENST00000454240 MMP24Q9Y5R2 645 aa22.4■■□□□ 1.18
SMARCC1-203ENST00000454240 CCDC160A6NGH7 325 aa22.39■■□□□ 1.17
SMARCC1-203ENST00000454240 CTXN2P0C2S0 81 aa22.39■■□□□ 1.17
SMARCC1-203ENST00000454240 MDKP21741 143 aaPredicted RBP22.39■■□□□ 1.17
SMARCC1-203ENST00000454240 EBI3Q14213 229 aa22.39■■□□□ 1.17
SMARCC1-203ENST00000454240 FAM71F2Q6NXP2 309 aa22.39■■□□□ 1.17
SMARCC1-203ENST00000454240 BEST4Q8NFU0 473 aa22.39■■□□□ 1.17
SMARCC1-203ENST00000454240 ABHD14BQ96IU4 210 aa22.39■■□□□ 1.17
SMARCC1-203ENST00000454240 RBM14Q96PK6 669 aaKnown RBP22.39■■□□□ 1.17
SMARCC1-203ENST00000454240 MIXL1Q9H2W2 232 aa22.39■■□□□ 1.17
SMARCC1-203ENST00000454240 FAM25AB3EWG3 89 aa22.38■■□□□ 1.17
SMARCC1-203ENST00000454240 FAM25CB3EWG5 89 aa22.38■■□□□ 1.17
SMARCC1-203ENST00000454240 FAM25GB3EWG6 89 aa22.38■■□□□ 1.17
SMARCC1-203ENST00000454240 CD1BP29016 333 aa22.38■■□□□ 1.17
SMARCC1-203ENST00000454240 PRSS3P35030 304 aa22.38■■□□□ 1.17
SMARCC1-203ENST00000454240 H1FOOQ8IZA3 346 aaPredicted RBP22.38■■□□□ 1.17
SMARCC1-203ENST00000454240 GINS4Q9BRT9 223 aa22.38■■□□□ 1.17
SMARCC1-203ENST00000454240 NPFFR1Q9GZQ6 430 aa22.38■■□□□ 1.17
SMARCC1-203ENST00000454240 SLIRPQ9GZT3 109 aaKnown RBP22.38■■□□□ 1.17
SMARCC1-203ENST00000454240 RANBP3Q9H6Z4 567 aaPredicted RBP22.38■■□□□ 1.17
SMARCC1-203ENST00000454240 BEX1Q9HBH7 125 aa22.38■■□□□ 1.17
SMARCC1-203ENST00000454240 RSL24D1Q9UHA3 163 aaKnown RBP22.38■■□□□ 1.17
SMARCC1-203ENST00000454240 MRPS7Q9Y2R9 242 aaKnown RBP22.38■■□□□ 1.17
SMARCC1-203ENST00000454240 IGHV3-72A0A0B4J1Y9 119 aa22.37■■□□□ 1.17
SMARCC1-203ENST00000454240 A0A1B0GUS0 222 aa22.37■■□□□ 1.17
SMARCC1-203ENST00000454240 ZNF701M0R085 212 aaPredicted RBP22.37■■□□□ 1.17
SMARCC1-203ENST00000454240 CTDSP2O14595 271 aa22.37■■□□□ 1.17
SMARCC1-203ENST00000454240 OR2F2O95006 317 aa22.37■■□□□ 1.17
SMARCC1-203ENST00000454240 IGKV1D-33P01593 117 aa22.37■■□□□ 1.17
SMARCC1-203ENST00000454240 IGKV1-33P01594 117 aa22.37■■□□□ 1.17
SMARCC1-203ENST00000454240 C12orf54Q6X4T0 127 aa22.37■■□□□ 1.17
SMARCC1-203ENST00000454240 LINC01006Q8NI28 216 aa22.37■■□□□ 1.17
SMARCC1-203ENST00000454240 S1PR3Q99500 378 aa22.37■■□□□ 1.17
SMARCC1-203ENST00000454240 SLC25A33Q9BSK2 321 aa22.37■■□□□ 1.17
SMARCC1-203ENST00000454240 RNF150Q9ULK6 438 aa22.37■■□□□ 1.17
SMARCC1-203ENST00000454240 ANAPC10Q9UM13 185 aa22.37■■□□□ 1.17
SMARCC1-203ENST00000454240 NABP2Q9BQ15 211 aa22.36■■□□□ 1.17
SMARCC1-203ENST00000454240 MRPL20Q9BYC9 149 aaKnown RBP22.36■■□□□ 1.17
SMARCC1-203ENST00000454240 STAB1Q9NY15 2570 aa22.36■■□□□ 1.17
SMARCC1-203ENST00000454240 TENM1Q9UKZ4 2725 aa22.35■■□□□ 1.17
SMARCC1-203ENST00000454240 CLPSL1A2RUU4 121 aa22.35■■□□□ 1.17
SMARCC1-203ENST00000454240 MEIS3P1A6NDR6 274 aa22.35■■□□□ 1.17
SMARCC1-203ENST00000454240 ZNF736B4DX44 427 aaPredicted RBP22.35■■□□□ 1.17
SMARCC1-203ENST00000454240 RGS5O15539 181 aa22.35■■□□□ 1.17
SMARCC1-203ENST00000454240 PROP1O75360 226 aa22.35■■□□□ 1.17
SMARCC1-203ENST00000454240 LSAMPQ13449 338 aa22.35■■□□□ 1.17
SMARCC1-203ENST00000454240 HES1Q14469 280 aa22.35■■□□□ 1.17
SMARCC1-203ENST00000454240 RPL39P5Q59GN2 51 aa22.35■■□□□ 1.17
SMARCC1-203ENST00000454240 LAX1Q8IWV1 398 aa22.35■■□□□ 1.17
SMARCC1-203ENST00000454240 OR4C13Q8NGP0 309 aa22.35■■□□□ 1.17
SMARCC1-203ENST00000454240 SNAPC3Q92966 411 aa22.35■■□□□ 1.17
SMARCC1-203ENST00000454240 EAF1Q96JC9 268 aaPredicted RBP22.35■■□□□ 1.17
SMARCC1-203ENST00000454240 AKR1E2Q96JD6 320 aa22.35■■□□□ 1.17
SMARCC1-203ENST00000454240 EXTL2Q9UBQ6 330 aa22.35■■□□□ 1.17
SMARCC1-203ENST00000454240 ADAM30Q9UKF2 790 aa22.35■■□□□ 1.17
SMARCC1-203ENST00000454240 GAB2Q9UQC2 676 aa22.35■■□□□ 1.17
SMARCC1-203ENST00000454240 TPPPO94811 219 aa22.34■■□□□ 1.17
SMARCC1-203ENST00000454240 OR8U9P0C7N5 309 aa22.34■■□□□ 1.17
SMARCC1-203ENST00000454240 TMEM11P17152 192 aa22.34■■□□□ 1.17
SMARCC1-203ENST00000454240 Q8N6K4 173 aa22.34■■□□□ 1.17
SMARCC1-203ENST00000454240 OR8U1Q8NH10 309 aa22.34■■□□□ 1.17
SMARCC1-203ENST00000454240 GPX8Q8TED1 209 aa22.34■■□□□ 1.17
SMARCC1-203ENST00000454240 NXF2Q9GZY0 626 aaKnown RBP22.34■■□□□ 1.17
SMARCC1-203ENST00000454240 ZNF221Q9UK13 617 aa22.34■■□□□ 1.17
SMARCC1-203ENST00000454240 NAT1P18440 290 aa22.33■■□□□ 1.17
SMARCC1-203ENST00000454240 GPR12P47775 334 aa22.33■■□□□ 1.17
SMARCC1-203ENST00000454240 ARPC4P59998 168 aa22.33■■□□□ 1.17
SMARCC1-203ENST00000454240 BLCAPP62952 87 aa22.33■■□□□ 1.17
SMARCC1-203ENST00000454240 SNX29P2Q8IUI4 249 aa22.33■■□□□ 1.17
SMARCC1-203ENST00000454240 Q8N2B8 174 aa22.33■■□□□ 1.17
SMARCC1-203ENST00000454240 OR2T10Q8NGZ9 312 aa22.33■■□□□ 1.17
SMARCC1-203ENST00000454240 ZNF702PQ9H963 129 aa22.33■■□□□ 1.17
SMARCC1-203ENST00000454240 SCPEP1Q9HB40 452 aa22.33■■□□□ 1.17
SMARCC1-203ENST00000454240 IFT46Q9NQC8 304 aa22.33■■□□□ 1.17
SMARCC1-203ENST00000454240 AMY1AP04745 511 aa22.32■■□□□ 1.16
SMARCC1-203ENST00000454240 AMY2AP04746 511 aa22.32■■□□□ 1.16
SMARCC1-203ENST00000454240 FCER2P06734 321 aa22.32■■□□□ 1.16
SMARCC1-203ENST00000454240 CT45A6P0DMU7 189 aa22.32■■□□□ 1.16
SMARCC1-203ENST00000454240 CT45A5P0DMU8 189 aa22.32■■□□□ 1.16
SMARCC1-203ENST00000454240 CT45A7P0DMV0 189 aa22.32■■□□□ 1.16
SMARCC1-203ENST00000454240 HNF4GQ14541 408 aa22.32■■□□□ 1.16
SMARCC1-203ENST00000454240 ZNF436-AS1Q8NC38 126 aaPredicted RBP22.32■■□□□ 1.16
SMARCC1-203ENST00000454240 OR5AP2Q8NGF4 316 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms