RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ISOC2Q96AB3 205 aa13.34□□□□□ -0.27
SNX17-204ENST00000453453 C18orf12Q96KH6 178 aa13.34□□□□□ -0.27
SNX17-204ENST00000453453 NECAP2Q9NVZ3 263 aa13.34□□□□□ -0.27
SNX17-204ENST00000453453 GAR1Q9NY12 217 aaKnown RBP13.34□□□□□ -0.27
SNX17-204ENST00000453453 B4DEV8 164 aa13.33□□□□□ -0.28
SNX17-204ENST00000453453 ST8SIA3O43173 380 aa13.33□□□□□ -0.28
SNX17-204ENST00000453453 PRH1P02810 166 aa13.33□□□□□ -0.28
SNX17-204ENST00000453453 Q8IYB0 196 aa13.33□□□□□ -0.28
SNX17-204ENST00000453453 OSR2Q8N2R0 312 aa13.33□□□□□ -0.28
SNX17-204ENST00000453453 MUC15Q8N387 334 aa13.33□□□□□ -0.28
SNX17-204ENST00000453453 CCDC71LQ8N9Z2 235 aa13.33□□□□□ -0.28
SNX17-204ENST00000453453 OR10G4Q8NGN3 311 aa13.33□□□□□ -0.28
SNX17-204ENST00000453453 CD300LFQ8TDQ1 290 aa13.33□□□□□ -0.28
SNX17-204ENST00000453453 OR2V2Q96R30 315 aa13.33□□□□□ -0.28
SNX17-204ENST00000453453 SPOCK3Q9BQ16 436 aa13.33□□□□□ -0.28
SNX17-204ENST00000453453 MS4A5Q9H3V2 200 aa13.33□□□□□ -0.28
SNX17-204ENST00000453453 WFDC1Q9HC57 220 aa13.33□□□□□ -0.28
SNX17-204ENST00000453453 KIAA1456Q9P272 454 aa13.33□□□□□ -0.28
SNX17-204ENST00000453453 IL19Q9UHD0 177 aa13.33□□□□□ -0.28
SNX17-204ENST00000453453 ANXA10Q9UJ72 324 aa13.33□□□□□ -0.28
SNX17-204ENST00000453453 RELNP78509 3460 aa13.33□□□□□ -0.28
SNX17-204ENST00000453453 IGKV1-12A0A0C4DH73 117 aa13.32□□□□□ -0.28
SNX17-204ENST00000453453 A0A1W2PPE2 198 aa13.32□□□□□ -0.28
SNX17-204ENST00000453453 A6NNC1 897 aa13.32□□□□□ -0.28
SNX17-204ENST00000453453 C17orf100A8MU93 164 aa13.32□□□□□ -0.28
SNX17-204ENST00000453453 SYNGR1O43759 233 aa13.32□□□□□ -0.28
SNX17-204ENST00000453453 PITX3O75364 302 aa13.32□□□□□ -0.28
SNX17-204ENST00000453453 IGKV1D-12P01611 117 aa13.32□□□□□ -0.28
SNX17-204ENST00000453453 IGHV1-46P01743 117 aa13.32□□□□□ -0.28
SNX17-204ENST00000453453 ADH4P08319 380 aa13.32□□□□□ -0.28
SNX17-204ENST00000453453 RNF224P0DH78 156 aa13.32□□□□□ -0.28
SNX17-204ENST00000453453 BCL3P20749 454 aa13.32□□□□□ -0.28
SNX17-204ENST00000453453 DEFA6Q01524 100 aa13.32□□□□□ -0.28
SNX17-204ENST00000453453 PRAMEF6Q5VXH4 476 aa13.32□□□□□ -0.28
SNX17-204ENST00000453453 POM121Q96HA1 1249 aa13.32□□□□□ -0.28
SNX17-204ENST00000453453 MEGF10Q96KG7 1140 aa13.32□□□□□ -0.28
SNX17-204ENST00000453453 Q96M66 194 aa13.32□□□□□ -0.28
SNX17-204ENST00000453453 SMIM3Q9BZL3 60 aa13.32□□□□□ -0.28
SNX17-204ENST00000453453 UBR5O95071 2799 aaPredicted RBP13.32□□□□□ -0.28
SNX17-204ENST00000453453 A0A1W2PP11 408 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 CDIPTO14735 213 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 HS3ST1O14792 307 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 CDS2O95674 445 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 ZNF728P0DKX0 622 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 MMP9P14780 707 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 TNFRSF1AP19438 455 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 FIP1L1Q6UN15 594 aaKnown RBP13.31□□□□□ -0.28
SNX17-204ENST00000453453 PFDN5Q99471 154 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 UFSP2Q9NUQ7 469 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 MTCH1Q9NZJ7 389 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 ICE1Q9Y2F5 2266 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 IGHV3-64DA0A0J9YX35 117 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 RBFOX3A6NFN3 312 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 PTBP3O95758 552 aaKnown RBP13.31□□□□□ -0.28
SNX17-204ENST00000453453 HBE1P02100 147 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 HSPB1P04792 205 aaKnown RBP13.31□□□□□ -0.28
SNX17-204ENST00000453453 ARG1P05089 322 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 CD55P08174 381 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 OR5H8P0DN80 308 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 OR2B8PP59922 312 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 SRSF1Q07955 248 aaKnown RBP eCLIP13.31□□□□□ -0.28
SNX17-204ENST00000453453 TESK1Q15569 626 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 ABCA11PQ4W5N1 156 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 SLC35E3Q7Z769 313 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 FAM185AQ8N0U4 392 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 ITLN1Q8WWA0 313 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 RSRP1Q9BUV0 290 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 C11orf1Q9H5F2 150 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 GFOD1Q9NXC2 390 aa13.31□□□□□ -0.28
SNX17-204ENST00000453453 HSPA12AO43301 675 aa13.3□□□□□ -0.28
SNX17-204ENST00000453453 RHBDL1O75783 438 aa13.3□□□□□ -0.28
SNX17-204ENST00000453453 SCGB1D2O95969 90 aa13.3□□□□□ -0.28
SNX17-204ENST00000453453 PGA5P0DJD9 388 aa13.3□□□□□ -0.28
SNX17-204ENST00000453453 GATA4P43694 442 aa13.3□□□□□ -0.28
SNX17-204ENST00000453453 NPBWR2P48146 333 aa13.3□□□□□ -0.28
SNX17-204ENST00000453453 RBM11P57052 281 aaKnown RBP13.3□□□□□ -0.28
SNX17-204ENST00000453453 PIGPP57054 158 aa13.3□□□□□ -0.28
SNX17-204ENST00000453453 FGF12P61328 243 aa13.3□□□□□ -0.28
SNX17-204ENST00000453453 GNMTQ14749 295 aa13.3□□□□□ -0.28
SNX17-204ENST00000453453 ZNF506Q5JVG8 444 aa13.3□□□□□ -0.28
SNX17-204ENST00000453453 SP5Q6BEB4 398 aaPredicted RBP13.3□□□□□ -0.28
SNX17-204ENST00000453453 FAM58AQ8N1B3 248 aa13.3□□□□□ -0.28
SNX17-204ENST00000453453 Q8NFD4 153 aa13.3□□□□□ -0.28
SNX17-204ENST00000453453 OR11L1Q8NGX0 322 aa13.3□□□□□ -0.28
SNX17-204ENST00000453453 RBMXL1Q96E39 390 aaKnown RBP13.3□□□□□ -0.28
SNX17-204ENST00000453453 GNPNAT1Q96EK6 184 aaPredicted RBP13.3□□□□□ -0.28
SNX17-204ENST00000453453 SPIN2AQ99865 258 aa13.3□□□□□ -0.28
SNX17-204ENST00000453453 SPIN2BQ9BPZ2 258 aa13.3□□□□□ -0.28
SNX17-204ENST00000453453 SLC25A31Q9H0C2 315 aa13.3□□□□□ -0.28
SNX17-204ENST00000453453 ZNF701Q9NV72 531 aaPredicted RBP13.3□□□□□ -0.28
SNX17-204ENST00000453453 ST3GAL6Q9Y274 331 aa13.3□□□□□ -0.28
SNX17-204ENST00000453453 FBXO7Q9Y3I1 522 aa13.3□□□□□ -0.28
SNX17-204ENST00000453453 FLNCQ14315 2725 aa13.3□□□□□ -0.28
SNX17-204ENST00000453453 DUXBA0A1W2PPF3 345 aa13.29□□□□□ -0.28
SNX17-204ENST00000453453 NXPH2O95156 264 aa13.29□□□□□ -0.28
SNX17-204ENST00000453453 SRP19P09132 144 aaKnown RBP13.29□□□□□ -0.28
SNX17-204ENST00000453453 DAOP14920 347 aa13.29□□□□□ -0.28
SNX17-204ENST00000453453 HIST1H1BP16401 226 aaKnown RBP13.29□□□□□ -0.28
SNX17-204ENST00000453453 GABRR1P24046 479 aa13.29□□□□□ -0.28
SNX17-204ENST00000453453 RPS10P46783 165 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms