RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 CHIAQ9BZP6 476 aa11.77□□□□□ -0.53
NCKIPSD-207ENST00000453349 VPREB3Q9UKI3 123 aa11.77□□□□□ -0.53
NCKIPSD-207ENST00000453349 RNF150Q9ULK6 438 aa11.77□□□□□ -0.53
NCKIPSD-207ENST00000453349 TIMM23O14925 209 aa11.76□□□□□ -0.53
NCKIPSD-207ENST00000453349 OR8U9P0C7N5 309 aa11.76□□□□□ -0.53
NCKIPSD-207ENST00000453349 NAT1P18440 290 aa11.76□□□□□ -0.53
NCKIPSD-207ENST00000453349 RCVRNP35243 200 aa11.76□□□□□ -0.53
NCKIPSD-207ENST00000453349 REG1BP48304 166 aa11.76□□□□□ -0.53
NCKIPSD-207ENST00000453349 TAS2R46P59540 309 aa11.76□□□□□ -0.53
NCKIPSD-207ENST00000453349 CDK10Q15131 360 aa11.76□□□□□ -0.53
NCKIPSD-207ENST00000453349 RNASE12Q5GAN4 147 aaKnown RBP11.76□□□□□ -0.53
NCKIPSD-207ENST00000453349 FAM131AQ6UXB0 335 aa11.76□□□□□ -0.53
NCKIPSD-207ENST00000453349 LIAT1Q6ZQX7 453 aa11.76□□□□□ -0.53
NCKIPSD-207ENST00000453349 THNSL2Q86YJ6 484 aa11.76□□□□□ -0.53
NCKIPSD-207ENST00000453349 ODF3L1Q8IXM7 274 aa11.76□□□□□ -0.53
NCKIPSD-207ENST00000453349 OR8U1Q8NH10 309 aa11.76□□□□□ -0.53
NCKIPSD-207ENST00000453349 SNAPC3Q92966 411 aa11.76□□□□□ -0.53
NCKIPSD-207ENST00000453349 ABHD14BQ96IU4 210 aa11.76□□□□□ -0.53
NCKIPSD-207ENST00000453349 AGMATQ9BSE5 352 aa11.76□□□□□ -0.53
NCKIPSD-207ENST00000453349 PARP12Q9H0J9 701 aaKnown RBP11.76□□□□□ -0.53
NCKIPSD-207ENST00000453349 IFI27L2Q9H2X8 130 aa11.76□□□□□ -0.53
NCKIPSD-207ENST00000453349 RAB18Q9NP72 206 aa11.76□□□□□ -0.53
NCKIPSD-207ENST00000453349 ANAPC10Q9UM13 185 aa11.76□□□□□ -0.53
NCKIPSD-207ENST00000453349 SAA2-SAA4A0A096LPE2 208 aa11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 A0A1W2PPI3 338 aa11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 GABARAPH6UMI1 98 aa11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 CTDSPLO15194 276 aa11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 PMP2P02689 132 aa11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 SAA2P0DJI9 122 aaPredicted RBP11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 OR5H8P0DN80 308 aa11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 NFYAP23511 347 aaPredicted RBP11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 GPR12P47775 334 aa11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 LUMP51884 338 aaPredicted RBP11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 ACTBP60709 375 aa11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 RPL15P61313 204 aaKnown RBP11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 ACTG1P63261 375 aa11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 FAM71F2Q6NXP2 309 aa11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 ZNF833PQ6ZTB9 187 aa11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 LYSMD2Q8IV50 215 aa11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 DRAM1Q8N682 238 aa11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 OR5H2Q8NGV7 314 aa11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 OR52I2Q8NH67 350 aa11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 GAB2Q9UQC2 676 aa11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 TCF19Q9Y242 345 aa11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 OR2W1Q9Y3N9 320 aa11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 NSD1Q96L73 2696 aaPredicted RBP11.75□□□□□ -0.53
NCKIPSD-207ENST00000453349 TLN2Q9Y4G6 2542 aa11.74□□□□□ -0.53
NCKIPSD-207ENST00000453349 A6NDX4 124 aa11.74□□□□□ -0.53
NCKIPSD-207ENST00000453349 FAM181BA6NEQ2 426 aa11.74□□□□□ -0.53
NCKIPSD-207ENST00000453349 FAM90A9PA6NNJ1 464 aa11.74□□□□□ -0.53
NCKIPSD-207ENST00000453349 J3QRK9 145 aa11.74□□□□□ -0.53
NCKIPSD-207ENST00000453349 GPR137BO60478 399 aa11.74□□□□□ -0.53
NCKIPSD-207ENST00000453349 CD24P25063 80 aa11.74□□□□□ -0.53
NCKIPSD-207ENST00000453349 HLA-DMAP28067 261 aa11.74□□□□□ -0.53
NCKIPSD-207ENST00000453349 CD1BP29016 333 aa11.74□□□□□ -0.53
NCKIPSD-207ENST00000453349 FCGR2CP31995 323 aa11.74□□□□□ -0.53
NCKIPSD-207ENST00000453349 HES1Q14469 280 aa11.74□□□□□ -0.53
NCKIPSD-207ENST00000453349 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.74□□□□□ -0.53
NCKIPSD-207ENST00000453349 OR56B4Q8NH76 319 aa11.74□□□□□ -0.53
NCKIPSD-207ENST00000453349 GIMAP1Q8WWP7 306 aa11.74□□□□□ -0.53
NCKIPSD-207ENST00000453349 OR2D2Q9H210 308 aa11.74□□□□□ -0.53
NCKIPSD-207ENST00000453349 EHFQ9NZC4 300 aa11.74□□□□□ -0.53
NCKIPSD-207ENST00000453349 KLK11Q9UBX7 282 aa11.74□□□□□ -0.53
NCKIPSD-207ENST00000453349 MTFP1Q9UDX5 166 aa11.74□□□□□ -0.53
NCKIPSD-207ENST00000453349 TEP1Q99973 2627 aaKnown RBP11.74□□□□□ -0.53
NCKIPSD-207ENST00000453349 RNF212BA8MTL3 300 aa11.73□□□□□ -0.53
NCKIPSD-207ENST00000453349 SLC22A5O76082 557 aa11.73□□□□□ -0.53
NCKIPSD-207ENST00000453349 SNRNP70P08621 437 aaKnown RBP11.73□□□□□ -0.53
NCKIPSD-207ENST00000453349 RFX2P48378 723 aa11.73□□□□□ -0.53
NCKIPSD-207ENST00000453349 TSPAN5P62079 268 aa11.73□□□□□ -0.53
NCKIPSD-207ENST00000453349 SSBP1Q04837 148 aaKnown RBP11.73□□□□□ -0.53
NCKIPSD-207ENST00000453349 DYRK1AQ13627 763 aa11.73□□□□□ -0.53
NCKIPSD-207ENST00000453349 KRTAP24-1Q3LI83 254 aa11.73□□□□□ -0.53
NCKIPSD-207ENST00000453349 RPL39P5Q59GN2 51 aa11.73□□□□□ -0.53
NCKIPSD-207ENST00000453349 SPANXN2Q5MJ10 180 aa11.73□□□□□ -0.53
NCKIPSD-207ENST00000453349 CCBE1Q6UXH8 406 aaPredicted RBP11.73□□□□□ -0.53
NCKIPSD-207ENST00000453349 OVCH2Q7RTZ1 564 aa11.73□□□□□ -0.53
NCKIPSD-207ENST00000453349 OR6Q1Q8NGQ2 317 aa11.73□□□□□ -0.53
NCKIPSD-207ENST00000453349 CFHR4Q92496 578 aa11.73□□□□□ -0.53
NCKIPSD-207ENST00000453349 AKR1E2Q96JD6 320 aa11.73□□□□□ -0.53
NCKIPSD-207ENST00000453349 SOSTQ9BQB4 213 aa11.73□□□□□ -0.53
NCKIPSD-207ENST00000453349 SONP18583 2426 aaKnown RBP11.72□□□□□ -0.53
NCKIPSD-207ENST00000453349 IGHV3-72A0A0B4J1Y9 119 aa11.72□□□□□ -0.53
NCKIPSD-207ENST00000453349 ZNF736B4DX44 427 aaPredicted RBP11.72□□□□□ -0.53
NCKIPSD-207ENST00000453349 IGKV1D-33P01593 117 aa11.72□□□□□ -0.53
NCKIPSD-207ENST00000453349 IGKV1-33P01594 117 aa11.72□□□□□ -0.53
NCKIPSD-207ENST00000453349 TMEM11P17152 192 aa11.72□□□□□ -0.53
NCKIPSD-207ENST00000453349 PTBP1P26599 531 aaKnown RBP eCLIP11.72□□□□□ -0.534e-6■■■■■ 29.2
NCKIPSD-207ENST00000453349 MC5RP33032 325 aa11.72□□□□□ -0.53
NCKIPSD-207ENST00000453349 HRH1P35367 487 aa11.72□□□□□ -0.53
NCKIPSD-207ENST00000453349 DGCR2P98153 550 aa11.72□□□□□ -0.53
NCKIPSD-207ENST00000453349 HABP2Q14520 560 aaPredicted RBP11.72□□□□□ -0.53
NCKIPSD-207ENST00000453349 KRTAP21-3Q3LHN1 58 aa11.72□□□□□ -0.53
NCKIPSD-207ENST00000453349 ACTBL2Q562R1 376 aa11.72□□□□□ -0.53
NCKIPSD-207ENST00000453349 PYDC2Q56P42 97 aa11.72□□□□□ -0.53
NCKIPSD-207ENST00000453349 DHRS7BQ6IAN0 325 aaPredicted RBP11.72□□□□□ -0.53
NCKIPSD-207ENST00000453349 DHRS11Q6UWP2 260 aa11.72□□□□□ -0.53
NCKIPSD-207ENST00000453349 C16orf82Q7Z2V1 217 aa11.72□□□□□ -0.53
NCKIPSD-207ENST00000453349 TMEM219Q86XT9 240 aa11.72□□□□□ -0.53
NCKIPSD-207ENST00000453349 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms