RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 DDA1Q9BW61 102 aa6.66□□□□□ -1.34
RIF1-206ENST00000453091 ZNF107Q9UII5 783 aaPredicted RBP6.66□□□□□ -1.34
RIF1-206ENST00000453091 CROCCQ5TZA2 2017 aa6.66□□□□□ -1.34
RIF1-206ENST00000453091 IGKV1D-8A0A087WSZ0 117 aa6.66□□□□□ -1.34
RIF1-206ENST00000453091 TRAV17A0A0B4J275 112 aa6.66□□□□□ -1.34
RIF1-206ENST00000453091 CGB1A6NKQ9 187 aa6.66□□□□□ -1.34
RIF1-206ENST00000453091 B4DEV8 164 aa6.66□□□□□ -1.34
RIF1-206ENST00000453091 P01737 135 aa6.66□□□□□ -1.34
RIF1-206ENST00000453091 S100A4P26447 101 aaKnown RBP6.66□□□□□ -1.34
RIF1-206ENST00000453091 CCL8P80075 99 aa6.66□□□□□ -1.34
RIF1-206ENST00000453091 DCTN5Q9BTE1 182 aa6.66□□□□□ -1.34
RIF1-206ENST00000453091 A0A0G2JMM0 328 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 A0A1W2PPB8 328 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 A0A1W2PRS3 328 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 KIR3DP1A8MWS1 328 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 CDX1P47902 265 aaPredicted RBP6.65□□□□□ -1.34
RIF1-206ENST00000453091 GLIPR1P48060 266 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 GAS1P54826 345 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 P2RY6Q15077 328 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 RNPS1Q15287 305 aaKnown RBP6.65□□□□□ -1.34
RIF1-206ENST00000453091 ELOBQ15370 118 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 FGFRL1Q8N441 504 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 OR4A4PQ8NGN8 299 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 MRPL18Q9H0U6 180 aaKnown RBP6.65□□□□□ -1.34
RIF1-206ENST00000453091 TUBD1Q9UJT1 453 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 S4R3C0 116 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 KIF13BQ9NQT8 1826 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 HTN1P15515 57 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 TCF23Q7RTU1 214 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 S100A7AQ86SG5 101 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 TAF15Q92804 592 aaKnown RBP eCLIP6.65□□□□□ -1.34
RIF1-206ENST00000453091 RAB24Q969Q5 203 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 NDFIP1Q9BT67 221 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 SF3B5Q9BWJ5 86 aaKnown RBP6.65□□□□□ -1.34
RIF1-206ENST00000453091 QTRT1Q9BXR0 403 aaKnown RBP6.65□□□□□ -1.34
RIF1-206ENST00000453091 HEXA-AS1Q9H8Q6 139 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 LYRM2Q9NU23 88 aaPredicted RBP6.65□□□□□ -1.34
RIF1-206ENST00000453091 IGHV3OR16-10A0A075B7F0 116 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 IFITM10A6NMD0 228 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 RRHO14718 337 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 HIST1H1BP16401 226 aaKnown RBP6.65□□□□□ -1.34
RIF1-206ENST00000453091 RPL7P18124 248 aaKnown RBP6.65□□□□□ -1.34
RIF1-206ENST00000453091 SSTR5P35346 364 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 COTL1Q14019 142 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 WFDC3Q8IUB2 231 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 OR4S2Q8NH73 311 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 Q8WTZ3 238 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 WNT10AQ9GZT5 417 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 VSIRQ9H7M9 311 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 DLL3Q9NYJ7 618 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 SHANK3Q9BYB0 1731 aa6.65□□□□□ -1.34
RIF1-206ENST00000453091 DANCRP0C864 163 aa6.65□□□□□ -1.35
RIF1-206ENST00000453091 Q96M66 194 aa6.65□□□□□ -1.35
RIF1-206ENST00000453091 USP54Q70EL1 1684 aa6.65□□□□□ -1.35
RIF1-206ENST00000453091 CRYBB3P26998 211 aa6.65□□□□□ -1.35
RIF1-206ENST00000453091 COL8A1P27658 744 aa6.65□□□□□ -1.35
RIF1-206ENST00000453091 HOXA6P31267 233 aa6.65□□□□□ -1.35
RIF1-206ENST00000453091 NMUP48645 174 aa6.65□□□□□ -1.35
RIF1-206ENST00000453091 WDR74Q6RFH5 385 aaPredicted RBP6.65□□□□□ -1.35
RIF1-206ENST00000453091 C5orf17Q8NAS9 161 aa6.65□□□□□ -1.35
RIF1-206ENST00000453091 PGLYRP4Q96LB8 373 aa6.65□□□□□ -1.35
RIF1-206ENST00000453091 WNT5BQ9H1J7 359 aa6.65□□□□□ -1.35
RIF1-206ENST00000453091 ORM1P02763 201 aa6.65□□□□□ -1.35
RIF1-206ENST00000453091 MFAP2P55001 183 aa6.65□□□□□ -1.35
RIF1-206ENST00000453091 SPCS3P61009 180 aa6.65□□□□□ -1.35
RIF1-206ENST00000453091 ZNF552Q9H707 407 aaPredicted RBP6.65□□□□□ -1.35
RIF1-206ENST00000453091 SAP30LQ9HAJ7 183 aa6.65□□□□□ -1.35
RIF1-206ENST00000453091 CBLN1P23435 193 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 RELBQ01201 579 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 PTX4Q96A99 478 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 HARBI1Q96MB7 349 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 RNF126Q9BV68 326 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 SCN1AP35498 2009 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 ATP5G3P48201 142 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 ZNF658BQ4V348 819 aaPredicted RBP6.64□□□□□ -1.35
RIF1-206ENST00000453091 H1FOOQ8IZA3 346 aaPredicted RBP6.64□□□□□ -1.35
RIF1-206ENST00000453091 OR5A2Q8NGI9 324 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 ZPBPQ9BS86 351 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 AAMDCQ9H7C9 122 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 WIPI2Q9Y4P8 454 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 F11RQ9Y624 299 aaKnown RBP6.64□□□□□ -1.35
RIF1-206ENST00000453091 CEACAM21Q3KPI0 293 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 GFI1BQ5VTD9 330 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 SCARF2Q96GP6 870 aaPredicted RBP6.64□□□□□ -1.35
RIF1-206ENST00000453091 PARLQ9H300 379 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 COA4Q9NYJ1 87 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 SELENOKQ9Y6D0 94 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 C5orf63A6NC05 138 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 PGPEP1LA6NFU8 196 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 A6NNC1 897 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 J3QR06 171 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 MGPP08493 103 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 NPY1RP25929 384 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 FAM27BQ5VT28 67 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 OR4A47Q6IF82 309 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 WDFY1Q8IWB7 410 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 MYOZ1Q9NP98 299 aaPredicted RBP6.64□□□□□ -1.35
RIF1-206ENST00000453091 A0A0A6YYD4 124 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 GAPDHP04406 335 aaKnown RBP6.64□□□□□ -1.35
RIF1-206ENST00000453091 ARL14EPLP0DKL9 152 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms