RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 MEIKINA0A087WXM9 373 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 NKX2-6A6NCS4 301 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 PIRO00625 290 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 MRASO14807 208 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 TCF21O43680 179 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 CSN2P05814 226 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 SOD3P08294 240 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 SCGB1C2P0DMR2 95 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 NPY1RP25929 384 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 RPL35P42766 123 aaKnown RBP3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 TAF6P49848 677 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZNF140P52738 457 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 RPL23P62829 140 aaKnown RBP3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 MRPS10P82664 201 aaKnown RBP3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 FHL1Q13642 323 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 RUNX3Q13761 415 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 TAF9Q16594 264 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 SCGB2B2Q4G0G5 96 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 C9orf66Q5T8R8 295 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZNF773Q6PK81 442 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 TCF23Q7RTU1 214 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 FAM19A3Q7Z5A8 133 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 PRNTQ86SH4 94 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 LINC00596Q86U02 117 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 MDP1Q86V88 176 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 TMEM86AQ8N2M4 240 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZNF615Q8N8J6 731 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZIC4Q8N9L1 334 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 CSNK1G2-AS1Q8NCQ2 148 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 SLC30A7Q8NEW0 376 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 OR2T27Q8NH04 317 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 OR52P1PQ8NH57 321 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 OR51H1Q8NH63 302 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 SCGB1C1Q8TD33 95 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 ARL11Q969Q4 196 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 NARS2Q96I59 477 aaKnown RBP3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 KCNS1Q96KK3 526 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 NMNAT3Q96T66 252 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 PAXXQ9BUH6 204 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 SMIM3Q9BZL3 60 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 COMMD5Q9GZQ3 224 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 OR2D2Q9H210 308 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 POPDC3Q9HBV1 291 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 SLC23A2Q9UGH3 650 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 KLF13Q9Y2Y9 288 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 ABCC12Q96J65 1359 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 FAM135AQ9P2D6 1515 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 IGKV1-27A0A075B6S5 117 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 IGHV3-16A0A0C4DH30 117 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 OR4C45A6NMZ5 311 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 MPTX1A8MV57 137 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 H3BSA7 217 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 M0R2Z0 102 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 UPK1AO00322 258 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 SLC22A1O15245 554 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 TRAF3IP2O43734 574 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 GNG7O60262 68 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 COX7A2P2O60397 106 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZNF354AO60765 605 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 PIAS1O75925 651 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 IGHV3-48P01763 117 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 GYPCP04921 128 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 OR4Q2P0C623 313 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZNF806P0C7X5 589 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 RPS3P23396 243 aaKnown RBP eCLIP3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 CNTFRP26992 372 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 G6PCP35575 357 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 POLR2IP36954 125 aaKnown RBP3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 RPL34P49207 117 aaKnown RBP3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 PSMB3P49720 205 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 RAP1AP62834 184 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 HERVK_113P63121 156 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 TNFAIP6P98066 277 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 BIKQ13323 160 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 SSX1Q16384 188 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 GUCA2BQ16661 112 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZFP69Q49AA0 526 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 CLLU1OSQ5K130 101 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 TMUB2Q71RG4 321 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 CROCCP2Q86T23 111 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 SGPP2Q8IWX5 399 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 NRACQ8N912 160 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 TMEM75Q8N9X5 138 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 DCAF4L2Q8NA75 395 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 OR13C8Q8NGS7 320 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 ACOT12Q8WYK0 555 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 TMEM101Q96IK0 257 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 PPP3R2Q96LZ3 170 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 IP6K3Q96PC2 410 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 PGLYRP2Q96PD5 576 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 TSPAN32Q96QS1 320 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 TP53RKQ96S44 253 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZNF436Q9C0F3 470 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 PTGES2Q9H7Z7 377 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 JPT2Q9H910 190 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 GPR84Q9NQS5 396 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 ANAPC10Q9UM13 185 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 FLVCR1Q9Y5Y0 555 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 F11RQ9Y624 299 aaKnown RBP3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 PRSS21Q9Y6M0 314 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms