RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 TMEM50BP56557 158 aa12.6□□□□□ -0.39
SGCE-208ENST00000450385 ACTBP60709 375 aa12.6□□□□□ -0.39
SGCE-208ENST00000450385 EGFEM1PQ0D2K5 195 aa12.6□□□□□ -0.39
SGCE-208ENST00000450385 DCTN2Q13561 401 aaKnown RBP12.6□□□□□ -0.39
SGCE-208ENST00000450385 GNMTQ14749 295 aa12.6□□□□□ -0.39
SGCE-208ENST00000450385 ARL6IP1Q15041 203 aa12.6□□□□□ -0.39
SGCE-208ENST00000450385 MMDQ15546 238 aa12.6□□□□□ -0.39
SGCE-208ENST00000450385 MRPL41Q8IXM3 137 aaKnown RBP12.6□□□□□ -0.39
SGCE-208ENST00000450385 CNBD2Q96M20 576 aa12.6□□□□□ -0.39
SGCE-208ENST00000450385 P2RX4Q99571 388 aa12.6□□□□□ -0.39
SGCE-208ENST00000450385 GFI1Q99684 422 aa12.6□□□□□ -0.39
SGCE-208ENST00000450385 AGMATQ9BSE5 352 aa12.6□□□□□ -0.39
SGCE-208ENST00000450385 TOLLIPQ9H0E2 274 aa12.6□□□□□ -0.39
SGCE-208ENST00000450385 Q9N2K0 584 aa12.6□□□□□ -0.39
SGCE-208ENST00000450385 NDUFB11Q9NX14 153 aa12.6□□□□□ -0.39
SGCE-208ENST00000450385 KIAA1456Q9P272 454 aa12.6□□□□□ -0.39
SGCE-208ENST00000450385 ZNF107Q9UII5 783 aaPredicted RBP12.6□□□□□ -0.39
SGCE-208ENST00000450385 AK3Q9UIJ7 227 aa12.6□□□□□ -0.39
SGCE-208ENST00000450385 SAA2-SAA4A0A096LPE2 208 aa12.59□□□□□ -0.39
SGCE-208ENST00000450385 LINC01548A6NM66 108 aa12.59□□□□□ -0.39
SGCE-208ENST00000450385 NUDT19A8MXV4 375 aa12.59□□□□□ -0.39
SGCE-208ENST00000450385 NBR2O15453 112 aa12.59□□□□□ -0.39
SGCE-208ENST00000450385 HSPA12AO43301 675 aa12.59□□□□□ -0.39
SGCE-208ENST00000450385 DENRO43583 198 aaKnown RBP12.59□□□□□ -0.39
SGCE-208ENST00000450385 NDUFA3O95167 84 aa12.59□□□□□ -0.39
SGCE-208ENST00000450385 SAA2P0DJI9 122 aaPredicted RBP12.59□□□□□ -0.39
SGCE-208ENST00000450385 RAB6AP20340 208 aa12.59□□□□□ -0.39
SGCE-208ENST00000450385 GADD45AP24522 165 aa12.59□□□□□ -0.39
SGCE-208ENST00000450385 MYL9P24844 172 aa12.59□□□□□ -0.39
SGCE-208ENST00000450385 VEGFCP49767 419 aa12.59□□□□□ -0.39
SGCE-208ENST00000450385 HLA-DRB3P79483 266 aa12.59□□□□□ -0.39
SGCE-208ENST00000450385 MRPS15P82914 257 aaKnown RBP12.59□□□□□ -0.39
SGCE-208ENST00000450385 CFHR3Q02985 330 aa12.59□□□□□ -0.39
SGCE-208ENST00000450385 SRSF7Q16629 238 aaKnown RBP eCLIP12.59□□□□□ -0.39
SGCE-208ENST00000450385 LIN54Q6MZP7 749 aa12.59□□□□□ -0.39
SGCE-208ENST00000450385 Q6ZPA2 131 aa12.59□□□□□ -0.39
SGCE-208ENST00000450385 KLHL30-AS1Q8NEE0 82 aa12.59□□□□□ -0.39
SGCE-208ENST00000450385 OR8U1Q8NH10 309 aa12.59□□□□□ -0.39
SGCE-208ENST00000450385 MRAPQ8TCY5 172 aa12.59□□□□□ -0.39
SGCE-208ENST00000450385 FCGR1BQ92637 280 aa12.59□□□□□ -0.39
SGCE-208ENST00000450385 CMSS1Q9BQ75 279 aaKnown RBP12.59□□□□□ -0.39
SGCE-208ENST00000450385 IFI27L2Q9H2X8 130 aa12.59□□□□□ -0.39
SGCE-208ENST00000450385 AURKAIP1Q9NWT8 199 aaPredicted RBP12.59□□□□□ -0.39
SGCE-208ENST00000450385 GAB2Q9UQC2 676 aa12.59□□□□□ -0.39
SGCE-208ENST00000450385 METTL21EPA6NDL7 271 aa12.58□□□□□ -0.4
SGCE-208ENST00000450385 PSMB8P28062 276 aa12.58□□□□□ -0.4
SGCE-208ENST00000450385 CEACAM6P40199 344 aa12.58□□□□□ -0.4
SGCE-208ENST00000450385 MAP2K4P45985 399 aa12.58□□□□□ -0.4
SGCE-208ENST00000450385 TAGLNQ01995 201 aaKnown RBP12.58□□□□□ -0.4
SGCE-208ENST00000450385 C5orf64Q2M2E5 130 aa12.58□□□□□ -0.4
SGCE-208ENST00000450385 ZNF660Q6AZW8 331 aaPredicted RBP12.58□□□□□ -0.4
SGCE-208ENST00000450385 ETV3LQ6ZN32 361 aa12.58□□□□□ -0.4
SGCE-208ENST00000450385 TCTEX1D1Q8N7M0 179 aa12.58□□□□□ -0.4
SGCE-208ENST00000450385 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.58□□□□□ -0.4
SGCE-208ENST00000450385 OR5AN1Q8NGI8 311 aa12.58□□□□□ -0.4
SGCE-208ENST00000450385 OR4A4PQ8NGN8 299 aa12.58□□□□□ -0.4
SGCE-208ENST00000450385 SETD6Q8TBK2 473 aa12.58□□□□□ -0.4
SGCE-208ENST00000450385 ARHGAP5-AS1Q96IT6 56 aa12.58□□□□□ -0.4
SGCE-208ENST00000450385 PECRQ9BY49 303 aa12.58□□□□□ -0.4
SGCE-208ENST00000450385 MRPL20Q9BYC9 149 aaKnown RBP12.58□□□□□ -0.4
SGCE-208ENST00000450385 LINC00527Q9UJ94 153 aa12.58□□□□□ -0.4
SGCE-208ENST00000450385 IFITM5A6NNB3 132 aa12.57□□□□□ -0.4
SGCE-208ENST00000450385 TRDCB7Z8K6 153 aa12.57□□□□□ -0.4
SGCE-208ENST00000450385 CCL24O00175 119 aa12.57□□□□□ -0.4
SGCE-208ENST00000450385 FGF9P31371 208 aaPredicted RBP12.57□□□□□ -0.4
SGCE-208ENST00000450385 CRIP2P52943 208 aaPredicted RBP12.57□□□□□ -0.4
SGCE-208ENST00000450385 UBE2UQ5VVX9 321 aa12.57□□□□□ -0.4
SGCE-208ENST00000450385 TMEM65Q6PI78 240 aa12.57□□□□□ -0.4
SGCE-208ENST00000450385 RAB3CQ96E17 227 aa12.57□□□□□ -0.4
SGCE-208ENST00000450385 UBE2E2Q96LR5 201 aa12.57□□□□□ -0.4
SGCE-208ENST00000450385 KCTD7Q96MP8 289 aa12.57□□□□□ -0.4
SGCE-208ENST00000450385 OR51J1Q9H342 316 aa12.57□□□□□ -0.4
SGCE-208ENST00000450385 ZNF221Q9UK13 617 aa12.57□□□□□ -0.4
SGCE-208ENST00000450385 CD3GP09693 182 aa12.56□□□□□ -0.4
SGCE-208ENST00000450385 CT45A6P0DMU7 189 aa12.56□□□□□ -0.4
SGCE-208ENST00000450385 CT45A5P0DMU8 189 aa12.56□□□□□ -0.4
SGCE-208ENST00000450385 CT45A7P0DMV0 189 aa12.56□□□□□ -0.4
SGCE-208ENST00000450385 RAB3BP20337 219 aa12.56□□□□□ -0.4
SGCE-208ENST00000450385 PPIFP30405 207 aaKnown RBP12.56□□□□□ -0.4
SGCE-208ENST00000450385 OR3A3P47888 321 aa12.56□□□□□ -0.4
SGCE-208ENST00000450385 RUNX1Q01196 453 aa12.56□□□□□ -0.4
SGCE-208ENST00000450385 TMEM267Q0VDI3 215 aaPredicted RBP12.56□□□□□ -0.4
SGCE-208ENST00000450385 SSX1Q16384 188 aa12.56□□□□□ -0.4
SGCE-208ENST00000450385 C8orf86Q6ZUL3 223 aa12.56□□□□□ -0.4
SGCE-208ENST00000450385 TPRA1Q86W33 373 aa12.56□□□□□ -0.4
SGCE-208ENST00000450385 MYOZ3Q8TDC0 251 aa12.56□□□□□ -0.4
SGCE-208ENST00000450385 C4orf3Q8WVX3 66 aa12.56□□□□□ -0.4
SGCE-208ENST00000450385 HSPB9Q9BQS6 159 aa12.56□□□□□ -0.4
SGCE-208ENST00000450385 C11orf54Q9H0W9 315 aaPredicted RBP12.56□□□□□ -0.4
SGCE-208ENST00000450385 RNF150Q9ULK6 438 aa12.56□□□□□ -0.4
SGCE-208ENST00000450385 WASHC3Q9Y3C0 194 aa12.56□□□□□ -0.4
SGCE-208ENST00000450385 TMEM272A0A1B0GTI8 110 aa12.55□□□□□ -0.4
SGCE-208ENST00000450385 ST8SIA5O15466 376 aa12.55□□□□□ -0.4
SGCE-208ENST00000450385 RAMP3O60896 148 aa12.55□□□□□ -0.4
SGCE-208ENST00000450385 SCGNO76038 276 aa12.55□□□□□ -0.4
SGCE-208ENST00000450385 SPDEFO95238 335 aa12.55□□□□□ -0.4
SGCE-208ENST00000450385 ATP6V1G2O95670 118 aa12.55□□□□□ -0.4
SGCE-208ENST00000450385 IGLV1-40P01703 118 aa12.55□□□□□ -0.4
SGCE-208ENST00000450385 RPLP1P05386 114 aaKnown RBP12.55□□□□□ -0.4
SGCE-208ENST00000450385 GSTP1P09211 210 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms