RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 ZNF45Q02386 682 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 SSX2Q16385 188 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 NSUN5P1Q3KNT7 163 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 IGSF11Q5DX21 431 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 C6orf183Q5T699 404 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 ZNF626Q68DY1 528 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 LINC00299Q6ZSB3 139 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 MOB1BQ7L9L4 216 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 ZNF565Q8N9K5 539 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 BEST4Q8NFU0 473 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 OR10V1Q8NGI7 309 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 IL1F10Q8WWZ1 152 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 LEAP2Q969E1 77 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 TRIM63Q969Q1 353 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 PARP12Q9H0J9 701 aaKnown RBP11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 ZNF286AQ9HBT8 521 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 TAS2R3Q9NYW6 316 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 KCNIP1Q9NZI2 227 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 OR1A1Q9P1Q5 309 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 MTFP1Q9UDX5 166 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 ODF3BA8MYP8 253 aa11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 NPIPB11E5RHQ5 1161 aa11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 SULT1C2O00338 296 aa11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 IGHV1-8P0DP01 117 aa11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 CD28P10747 220 aa11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 NFYBP25208 207 aa11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 PTBP1P26599 531 aaKnown RBP eCLIP11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 HLA-DMAP28067 261 aa11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 RAB13P51153 203 aa11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 LOXL3P58215 753 aa11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 MINOS1Q5TGZ0 78 aa11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 CCBE1Q6UXH8 406 aaPredicted RBP11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 LYSMD2Q8IV50 215 aa11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 Q8N402 240 aa11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 S100ZQ8WXG8 99 aa11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 R3HDM4Q96D70 268 aa11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 THAP7Q9BT49 309 aaPredicted RBP11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 WNT10AQ9GZT5 417 aa11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 GAL3ST2Q9H3Q3 398 aa11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 NECAP2Q9NVZ3 263 aa11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 IDI2-AS1Q9NZ38 188 aa11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 ANXA10Q9UJ72 324 aa11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 MINOS1-NBL1R4GNA1 71 aa11.02□□□□□ -0.65
PDLIM2-213ENST00000448520 LINC00854A0A1B0GVQ3 168 aa11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 M0QYG6 137 aa11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 SDCBPO00560 298 aaPredicted RBP11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 RBBP9O75884 186 aa11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 PMP2P02689 132 aa11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 NAT1P18440 290 aa11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 GZMHP20718 246 aa11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 RCVRNP35243 200 aa11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 CBX5P45973 191 aa11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 MRPS10P82664 201 aaKnown RBP11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 ZNF846Q147U1 533 aa11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 OXLD1Q5BKU9 147 aa11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 HIST2H2BDQ6DRA6 164 aa11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 FAAP20Q6NZ36 180 aa11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 DYNAPQ8N1N2 210 aa11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 MRAPQ8TCY5 172 aa11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 WIPF2Q8TF74 440 aaPredicted RBP11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 C15orf40Q8WUR7 153 aa11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 TSC22D3Q99576 134 aa11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 MMP28Q9H239 520 aa11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 RABL2AQ9UBK7 228 aaPredicted RBP11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 RABL2BQ9UNT1 228 aa11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 RBMX2Q9Y388 322 aaKnown RBP11.01□□□□□ -0.65
PDLIM2-213ENST00000448520 A0A1W2PPE3 182 aa11□□□□□ -0.65
PDLIM2-213ENST00000448520 F2RL2O00254 374 aa11□□□□□ -0.65
PDLIM2-213ENST00000448520 BET1O15155 118 aa11□□□□□ -0.65
PDLIM2-213ENST00000448520 SPINT2O43291 252 aa11□□□□□ -0.65
PDLIM2-213ENST00000448520 PRB2P02812 416 aaPredicted RBP11□□□□□ -0.65
PDLIM2-213ENST00000448520 CD40LGP29965 261 aa11□□□□□ -0.65
PDLIM2-213ENST00000448520 PPP1CCP36873 323 aaKnown RBP11□□□□□ -0.65
PDLIM2-213ENST00000448520 RFX2P48378 723 aa11□□□□□ -0.65
PDLIM2-213ENST00000448520 GNG10P50151 68 aa11□□□□□ -0.65
PDLIM2-213ENST00000448520 HABP2Q14520 560 aaPredicted RBP11□□□□□ -0.65
PDLIM2-213ENST00000448520 KIR2DS1Q14954 304 aa11□□□□□ -0.65
PDLIM2-213ENST00000448520 PLA1AQ53H76 456 aa11□□□□□ -0.65
PDLIM2-213ENST00000448520 ARSJQ5FYB0 599 aaPredicted RBP11□□□□□ -0.65
PDLIM2-213ENST00000448520 TRAT1Q6PIZ9 186 aa11□□□□□ -0.65
PDLIM2-213ENST00000448520 HEPN1Q6WQI6 88 aa11□□□□□ -0.65
PDLIM2-213ENST00000448520 Q6ZS49 121 aa11□□□□□ -0.65
PDLIM2-213ENST00000448520 TMEM219Q86XT9 240 aa11□□□□□ -0.65
PDLIM2-213ENST00000448520 LYG1Q8N1E2 194 aa11□□□□□ -0.65
PDLIM2-213ENST00000448520 GDPD1Q8N9F7 314 aa11□□□□□ -0.65
PDLIM2-213ENST00000448520 WFDC9Q8NEX5 89 aa11□□□□□ -0.65
PDLIM2-213ENST00000448520 OR4D10Q8NGI6 311 aa11□□□□□ -0.65
PDLIM2-213ENST00000448520 CITED2Q99967 270 aaPredicted RBP11□□□□□ -0.65
PDLIM2-213ENST00000448520 CABLES2Q9BTV7 478 aa11□□□□□ -0.65
PDLIM2-213ENST00000448520 WDR12Q9GZL7 423 aaKnown RBP11□□□□□ -0.65
PDLIM2-213ENST00000448520 TINAGL1Q9GZM7 467 aaPredicted RBP11□□□□□ -0.65
PDLIM2-213ENST00000448520 LINC00574Q9H8X3 128 aa11□□□□□ -0.65
PDLIM2-213ENST00000448520 SLC23A1Q9UHI7 598 aa11□□□□□ -0.65
PDLIM2-213ENST00000448520 SESN1Q9Y6P5 492 aa11□□□□□ -0.65
PDLIM2-213ENST00000448520 SLC31A2O15432 143 aa10.99□□□□□ -0.65
PDLIM2-213ENST00000448520 CD3DP04234 171 aa10.99□□□□□ -0.65
PDLIM2-213ENST00000448520 IL7P13232 177 aa10.99□□□□□ -0.65
PDLIM2-213ENST00000448520 NFYAP23511 347 aaPredicted RBP10.99□□□□□ -0.65
PDLIM2-213ENST00000448520 HRH1P35367 487 aa10.99□□□□□ -0.65
PDLIM2-213ENST00000448520 PPP5CP53041 499 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms