RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 COPS7AQ9UBW8 275 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 CDC42EP3Q9UKI2 254 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 C5orf42Q9H799 3197 aa8.02□□□□□ -1.12
SYNPO2-204ENST00000448416 SNURFLB1AK76 121 aa8.02□□□□□ -1.13
SYNPO2-204ENST00000448416 PSG1P11464 419 aa8.02□□□□□ -1.13
SYNPO2-204ENST00000448416 PSG2P11465 335 aa8.02□□□□□ -1.13
SYNPO2-204ENST00000448416 DRD1P21728 446 aa8.02□□□□□ -1.13
SYNPO2-204ENST00000448416 THBS3P49746 956 aa8.02□□□□□ -1.13
SYNPO2-204ENST00000448416 RNPS1Q15287 305 aaKnown RBP8.02□□□□□ -1.13
SYNPO2-204ENST00000448416 PRR27Q6MZM9 219 aa8.02□□□□□ -1.13
SYNPO2-204ENST00000448416 THAP3Q8WTV1 239 aaPredicted RBP8.02□□□□□ -1.13
SYNPO2-204ENST00000448416 OR5P3Q8WZ94 311 aa8.02□□□□□ -1.13
SYNPO2-204ENST00000448416 GNB4Q9HAV0 340 aa8.02□□□□□ -1.13
SYNPO2-204ENST00000448416 ASCC3Q8N3C0 2202 aaKnown RBP8.02□□□□□ -1.13
SYNPO2-204ENST00000448416 PDE6DO43924 150 aa8.02□□□□□ -1.13
SYNPO2-204ENST00000448416 COX5AP20674 150 aa8.02□□□□□ -1.13
SYNPO2-204ENST00000448416 ZDHHC23Q8IYP9 409 aa8.02□□□□□ -1.13
SYNPO2-204ENST00000448416 BCL2L2Q92843 193 aaPredicted RBP8.02□□□□□ -1.13
SYNPO2-204ENST00000448416 K7ERU9 68 aa8.02□□□□□ -1.13
SYNPO2-204ENST00000448416 TRAF3IP2O43734 574 aaPredicted RBP8.02□□□□□ -1.13
SYNPO2-204ENST00000448416 C3orf79P0CE67 100 aa8.02□□□□□ -1.13
SYNPO2-204ENST00000448416 SLC25A6P12236 298 aa8.02□□□□□ -1.13
SYNPO2-204ENST00000448416 SNAI3Q3KNW1 292 aa8.02□□□□□ -1.13
SYNPO2-204ENST00000448416 KLHDC7BQ96G42 594 aa8.02□□□□□ -1.13
SYNPO2-204ENST00000448416 PLEK2Q9NYT0 353 aa8.02□□□□□ -1.13
SYNPO2-204ENST00000448416 IGHV2-26A0A0B4J1V2 119 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 GABRA2P47869 451 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 ATP5G3P48201 142 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 PSG4Q00888 419 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 KRTCAP3Q53RY4 240 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 C1orf185Q5T7R7 199 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 LHFPL2Q6ZUX7 228 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 OR5B3Q8NH48 314 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 SGCZQ96LD1 299 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 MED12Q93074 2177 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 A0A1W2PNR3 127 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 PRSS47A8MTI9 375 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 DEFA4P12838 97 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 GLB1P16278 677 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 CD38P28907 300 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 PRRX1P54821 245 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 HHEXQ03014 270 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 NSDHLQ15738 373 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 OR4A47Q6IF82 309 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 Q8NFD4 153 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 PIGBOS1A0A0B4J2F0 54 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 IGLC7A0M8Q6 106 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 OR5B21A6NL26 309 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 TLX3O43711 291 aaPredicted RBP8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 MSR1P21757 451 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 C17orf67Q0P5P2 114 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 ZNF542PQ5EBM4 170 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 STUMQ69YW2 141 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 C16orf47Q6ZP98 133 aaPredicted RBP8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 PNKDQ8N490 385 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 MRPL43Q8N983 215 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 BORCS7Q96B45 105 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 SMIM12Q96EX1 92 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 IL19Q9UHD0 177 aa8.01□□□□□ -1.13
SYNPO2-204ENST00000448416 CLDN1O95832 211 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 TIMP3P35625 211 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 RBM11P57052 281 aaKnown RBP8□□□□□ -1.13
SYNPO2-204ENST00000448416 RSPO1Q2MKA7 263 aaPredicted RBP8□□□□□ -1.13
SYNPO2-204ENST00000448416 OR56B2PQ8NGI1 322 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 SPTSSAQ969W0 71 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 SOHLH2Q9NX45 425 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 SLC17A3O00476 420 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 GFRA1P56159 465 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 ASCL4Q6XD76 172 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 ZIC4Q8N9L1 334 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 ZDHHC19Q8WVZ1 309 aaPredicted RBP8□□□□□ -1.13
SYNPO2-204ENST00000448416 GMPPAQ96IJ6 420 aaPredicted RBP8□□□□□ -1.13
SYNPO2-204ENST00000448416 MTIF3Q9H2K0 278 aaKnown RBP8□□□□□ -1.13
SYNPO2-204ENST00000448416 IL36BQ9NZH7 164 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 ZNF891A8MT65 544 aaPredicted RBP8□□□□□ -1.13
SYNPO2-204ENST00000448416 H3BMH7 237 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 EFNA2O43921 213 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 NTF3P20783 257 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 RPS20P60866 119 aaKnown RBP8□□□□□ -1.13
SYNPO2-204ENST00000448416 RHOGP84095 191 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 HTD2P86397 168 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 KCNS1Q96KK3 526 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 NAT8BQ9UHF3 227 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 MYO9BQ13459 2157 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 A0A1W2PS18 150 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 NPIPA2E9PIF3 369 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 DEGS1O15121 323 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 FRMD6-AS1P0C7T7 363 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 CDC34P49427 236 aaPredicted RBP8□□□□□ -1.13
SYNPO2-204ENST00000448416 HYAL1Q12794 435 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 KIAA1644Q3SXP7 199 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 NIT1Q86X76 327 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 FAM58AQ8N1B3 248 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 APOBEC3DQ96AK3 386 aaPredicted RBP8□□□□□ -1.13
SYNPO2-204ENST00000448416 UHRF2Q96PU4 802 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 IL36GQ9NZH8 169 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 WNT16Q9UBV4 365 aa8□□□□□ -1.13
SYNPO2-204ENST00000448416 KIR2DS5A0A0G2JLQ3 304 aa7.99□□□□□ -1.13
SYNPO2-204ENST00000448416 A0A0G2JNG1 304 aa7.99□□□□□ -1.13
SYNPO2-204ENST00000448416 KIR2DS3K7RE56 304 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms