RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 GAPDHP04406 335 aaKnown RBP12.43□□□□□ -0.42
SF1-211ENST00000448404 ZNF880Q6PDB4 577 aa12.43□□□□□ -0.42
SF1-211ENST00000448404 ZNF474Q6S9Z5 364 aaPredicted RBP12.43□□□□□ -0.42
SF1-211ENST00000448404 PRSS33Q8NF86 280 aa12.43□□□□□ -0.42
SF1-211ENST00000448404 SARAFQ96BY9 339 aa12.43□□□□□ -0.42
SF1-211ENST00000448404 OR2D2Q9H210 308 aa12.43□□□□□ -0.42
SF1-211ENST00000448404 OPA3Q9H6K4 179 aa12.43□□□□□ -0.42
SF1-211ENST00000448404 C19orf12Q9NSK7 152 aa12.43□□□□□ -0.42
SF1-211ENST00000448404 CHD8Q9HCK8 2581 aa12.43□□□□□ -0.42
SF1-211ENST00000448404 AQP7O14520 342 aa12.43□□□□□ -0.42
SF1-211ENST00000448404 SH2D1BO14796 132 aa12.43□□□□□ -0.42
SF1-211ENST00000448404 DANCRP0C864 163 aa12.43□□□□□ -0.42
SF1-211ENST00000448404 OR2B8PP59922 312 aa12.43□□□□□ -0.42
SF1-211ENST00000448404 COL10A1Q03692 680 aa12.43□□□□□ -0.42
SF1-211ENST00000448404 INO80CQ6PI98 192 aaPredicted RBP12.43□□□□□ -0.42
SF1-211ENST00000448404 OR8G5Q8NG78 346 aa12.43□□□□□ -0.42
SF1-211ENST00000448404 OR13A1Q8NGR1 328 aa12.43□□□□□ -0.42
SF1-211ENST00000448404 S100PBPQ96BU1 408 aa12.43□□□□□ -0.42
SF1-211ENST00000448404 RSG1Q9BU20 258 aa12.43□□□□□ -0.42
SF1-211ENST00000448404 ZNF71Q9NQZ8 489 aaPredicted RBP12.43□□□□□ -0.42
SF1-211ENST00000448404 FAM212BQ9NTI7 297 aaPredicted RBP12.43□□□□□ -0.42
SF1-211ENST00000448404 RNF115Q9Y4L5 304 aa12.43□□□□□ -0.42
SF1-211ENST00000448404 PTPRQQ9UMZ3 2332 aa12.42□□□□□ -0.42
SF1-211ENST00000448404 BORCS7-ASMTA0A0B4J1R7 106 aa12.42□□□□□ -0.42
SF1-211ENST00000448404 OR5H1A6NKK0 313 aa12.42□□□□□ -0.42
SF1-211ENST00000448404 FAM157AC9JC47 383 aa12.42□□□□□ -0.42
SF1-211ENST00000448404 H0Y980 276 aa12.42□□□□□ -0.42
SF1-211ENST00000448404 RNF212Q495C1 297 aa12.42□□□□□ -0.42
SF1-211ENST00000448404 NCMAPQ5T1S8 102 aa12.42□□□□□ -0.42
SF1-211ENST00000448404 EIF5AL1Q6IS14 154 aaKnown RBP12.42□□□□□ -0.42
SF1-211ENST00000448404 LEAP2Q969E1 77 aa12.42□□□□□ -0.42
SF1-211ENST00000448404 SAT2Q96F10 170 aaPredicted RBP12.42□□□□□ -0.42
SF1-211ENST00000448404 POLDIP2Q9Y2S7 368 aa12.42□□□□□ -0.42
SF1-211ENST00000448404 FAM215AQ9Y5M1 114 aa12.42□□□□□ -0.42
SF1-211ENST00000448404 ABCA4P78363 2273 aa12.42□□□□□ -0.42
SF1-211ENST00000448404 ST8SIA5O15466 376 aa12.42□□□□□ -0.42
SF1-211ENST00000448404 FOLR2P14207 255 aa12.42□□□□□ -0.42
SF1-211ENST00000448404 COX5AP20674 150 aa12.42□□□□□ -0.42
SF1-211ENST00000448404 G6PCP35575 357 aa12.42□□□□□ -0.42
SF1-211ENST00000448404 ID3Q02535 119 aa12.42□□□□□ -0.42
SF1-211ENST00000448404 FAM27E3Q08E93 113 aa12.42□□□□□ -0.42
SF1-211ENST00000448404 IGFL2Q6UWQ7 119 aa12.42□□□□□ -0.42
SF1-211ENST00000448404 ZCCHC24Q8N2G6 241 aaKnown RBP12.42□□□□□ -0.42
SF1-211ENST00000448404 GINS3Q9BRX5 216 aa12.42□□□□□ -0.42
SF1-211ENST00000448404 VSIRQ9H7M9 311 aa12.42□□□□□ -0.42
SF1-211ENST00000448404 PARP11Q9NR21 331 aa12.42□□□□□ -0.42
SF1-211ENST00000448404 LYRM2Q9NU23 88 aaPredicted RBP12.42□□□□□ -0.42
SF1-211ENST00000448404 PROCRQ9UNN8 238 aa12.42□□□□□ -0.42
SF1-211ENST00000448404 hCG_1809904A0A1W2PP81 198 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 A0A1W2PR64 198 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 A0A1W2PRV1 198 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 SPRY3O43610 288 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 HBZP02008 142 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 OR8U8P0C7N1 319 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 HAGHQ16775 308 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 ADAM5Q6NVV9 412 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 FIP1L1Q6UN15 594 aaKnown RBP12.41□□□□□ -0.42
SF1-211ENST00000448404 IL34Q6ZMJ4 242 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 ZNF561Q8N587 486 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 CD177Q8N6Q3 437 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 ZNRF1Q8ND25 227 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 OR5D13Q8NGL4 314 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 LRRC29Q8WV35 223 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 SCRT1Q9BWW7 348 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 DCAF16Q9NXF7 216 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 CD5P06127 495 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 BMP5P22003 454 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 COL8A2P25067 703 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 GPX4P36969 197 aaPredicted RBP12.41□□□□□ -0.42
SF1-211ENST00000448404 RND3P61587 244 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 EIF5AP63241 154 aaKnown RBP12.41□□□□□ -0.42
SF1-211ENST00000448404 ZNF146Q15072 292 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 GUK1Q16774 197 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 GPR157Q5UAW9 335 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 FAM185AQ8N0U4 392 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 FGFRL1Q8N441 504 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 TCEAL7Q9BRU2 100 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 CABLES2Q9BTV7 478 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 ARV1Q9H2C2 271 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 NCOR2Q9Y618 2525 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 CGAP01215 116 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 CD55P08174 381 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 SNRNP70P08621 437 aaKnown RBP12.41□□□□□ -0.42
SF1-211ENST00000448404 CTXN2P0C2S0 81 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 IL2RGP31785 369 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 SNCAP37840 140 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 BHLHA15Q7RTS1 189 aaPredicted RBP12.41□□□□□ -0.42
SF1-211ENST00000448404 C15orf54Q8N8G6 183 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 DEFB108BQ8NET1 73 aa12.41□□□□□ -0.42
SF1-211ENST00000448404 METTL1Q9UBP6 276 aaKnown RBP12.41□□□□□ -0.42
SF1-211ENST00000448404 COL6A6A6NMZ7 2263 aa12.4□□□□□ -0.42
SF1-211ENST00000448404 DEFA4P12838 97 aa12.4□□□□□ -0.42
SF1-211ENST00000448404 CD82P27701 267 aa12.4□□□□□ -0.42
SF1-211ENST00000448404 GCH1P30793 250 aa12.4□□□□□ -0.42
SF1-211ENST00000448404 BRWD1-AS2P59051 145 aa12.4□□□□□ -0.42
SF1-211ENST00000448404 ERVFRD-1P60508 538 aa12.4□□□□□ -0.42
SF1-211ENST00000448404 SPANXN5Q5MJ07 72 aa12.4□□□□□ -0.42
SF1-211ENST00000448404 ACP7Q6ZNF0 438 aa12.4□□□□□ -0.42
SF1-211ENST00000448404 THNSL2Q86YJ6 484 aa12.4□□□□□ -0.42
SF1-211ENST00000448404 ZADH2Q8N4Q0 377 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms