RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 FAM90A22PA8MWA6 464 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 FAM90A12PA8MX19 464 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 FAM90A5PA8MXJ8 464 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 FAM90A23PA8MXZ1 464 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 OR2A4O95047 310 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 HOXD4P09016 255 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-204ENST00000448183 FAM90A15PP0C7V4 464 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 FAM90A13PP0C7W8 464 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 FAM90A14PP0C7W9 464 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 FAM90A24PP0C7X0 464 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 RNF224P0DH78 156 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 RND3P61587 244 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 HOXA4Q00056 320 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-204ENST00000448183 FUT5Q11128 374 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 SPANXN1Q5VSR9 72 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 UNQ9370/PRO34162Q6UXP9 181 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 WNT2BQ93097 391 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 OR2A7Q96R45 310 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 SOSTQ9BQB4 213 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 DMRT1Q9Y5R6 373 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 ALPK2Q86TB3 2170 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 A0A0J9YW62 118 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 OR4C46A6NHA9 309 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 F2RL2O00254 374 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 MGST3O14880 152 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 ZNF735P0CB33 412 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 KIR2DL1P43626 348 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-204ENST00000448183 TEX30Q5JUR7 227 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 MDP1Q86V88 176 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 OR2I1PQ8NGU4 316 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 NUDT16L1Q9BRJ7 211 aaKnown RBP6.74□□□□□ -1.33
NEDD9-204ENST00000448183 OR2J1Q9GZK6 312 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 MS4A5Q9H3V2 200 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 WDR54Q9H977 334 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 IGLV1-36A0A0B4J1U3 117 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 CLDN14O95500 239 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 KIR2DL2P43627 348 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-204ENST00000448183 CEBPDP49716 269 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-204ENST00000448183 COMPP49747 757 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-204ENST00000448183 PSG4Q00888 419 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 PRNTQ86SH4 94 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 FAM181AQ8N9Y4 354 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 FAM216AQ8WUB2 273 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 TREM2Q9NZC2 230 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 YBX2Q9Y2T7 364 aaKnown RBP6.74□□□□□ -1.33
NEDD9-204ENST00000448183 WIPI2Q9Y4P8 454 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 TGIF2-C20orf24A0A0A6YYL0 155 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 TMEM238LA0A1B0GVL6 79 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 A6NJY4 79 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 C21orf140B9A014 251 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 FAM90A26D6RGX4 464 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 J3KRW8 73 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 EIF3GO75821 320 aaKnown RBP eCLIP6.74□□□□□ -1.33
NEDD9-204ENST00000448183 AGFG2O95081 481 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 SCTP09683 121 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 FABP2P12104 132 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 PRDX2P32119 198 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 RPL31P62899 125 aaKnown RBP6.74□□□□□ -1.33
NEDD9-204ENST00000448183 LAIR2Q6ISS4 152 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 RND1Q92730 232 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 HIST1H2BAQ96A08 127 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 RHOVQ96L33 236 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 SCNM1Q9BWG6 230 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 LEPROTL1O95214 131 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 ERGP11308 486 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 MMDQ15546 238 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 Q5BKY6 102 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 ZNF841Q6ZN19 808 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 KCNK17Q96T54 332 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 DDA1Q9BW61 102 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 IGKV1-8A0A0C4DH67 115 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 CRXO43186 299 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-204ENST00000448183 DANCRP0C864 163 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 LINC00869P0C866 280 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 PRF1P14222 555 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 AGAP20933 346 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 PLP1P60201 277 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 RPS11P62280 158 aaKnown RBP eCLIP6.73□□□□□ -1.33
NEDD9-204ENST00000448183 COL10A1Q03692 680 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 WDR25Q64LD2 544 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-204ENST00000448183 OR1N2Q8NGR9 330 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 WFDC6Q9BQY6 131 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 MRPL18Q9H0U6 180 aaKnown RBP6.73□□□□□ -1.33
NEDD9-204ENST00000448183 CISD1Q9NZ45 108 aaKnown RBP6.73□□□□□ -1.33
NEDD9-204ENST00000448183 ZNF256Q9Y2P7 627 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-204ENST00000448183 LOC389332A0A1B0GUA5 103 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 CEACAM18A8MTB9 384 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 K7N7A8 449 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 RECKO95980 971 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 TMEM45BQ96B21 275 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 GPR146Q96CH1 333 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 C5orf66Q9H5L9 145 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 A0A1W2PPE3 182 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 TSPAN2O60636 221 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 PGLYRP1O75594 196 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-204ENST00000448183 IFI6P09912 130 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 RPL27AP46776 148 aaKnown RBP6.73□□□□□ -1.33
NEDD9-204ENST00000448183 UNC119Q13432 240 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 SLC25A34Q6PIV7 304 aa6.73□□□□□ -1.33
NEDD9-204ENST00000448183 C1orf174Q8IYL3 243 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms