RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 GNG10P50151 68 aa4.39□□□□□ -1.71
USP49-205ENST00000448078 MNAT1P51948 309 aa4.39□□□□□ -1.71
USP49-205ENST00000448078 SNU13P55769 128 aaKnown RBP4.39□□□□□ -1.71
USP49-205ENST00000448078 TCTAP57738 103 aa4.39□□□□□ -1.71
USP49-205ENST00000448078 LTC4SQ16873 150 aa4.39□□□□□ -1.71
USP49-205ENST00000448078 MICAQ29983 383 aa4.39□□□□□ -1.71
USP49-205ENST00000448078 SLC35D3Q5M8T2 416 aa4.39□□□□□ -1.71
USP49-205ENST00000448078 TMEM42Q69YG0 159 aa4.39□□□□□ -1.71
USP49-205ENST00000448078 GLDNQ6ZMI3 551 aaPredicted RBP4.39□□□□□ -1.71
USP49-205ENST00000448078 SLC16A13Q7RTY0 426 aa4.39□□□□□ -1.71
USP49-205ENST00000448078 TRPM8Q7Z2W7 1104 aa4.39□□□□□ -1.71
USP49-205ENST00000448078 CATSPERDQ86XM0 798 aa4.39□□□□□ -1.71
USP49-205ENST00000448078 LAX1Q8IWV1 398 aa4.39□□□□□ -1.71
USP49-205ENST00000448078 RPP25LQ8N5L8 163 aaKnown RBP4.39□□□□□ -1.71
USP49-205ENST00000448078 OR2K2Q8NGT1 345 aa4.39□□□□□ -1.71
USP49-205ENST00000448078 MYOZ3Q8TDC0 251 aa4.39□□□□□ -1.71
USP49-205ENST00000448078 TSEN15Q8WW01 171 aaKnown RBP4.39□□□□□ -1.71
USP49-205ENST00000448078 C10orf35Q96D05 121 aa4.39□□□□□ -1.71
USP49-205ENST00000448078 CMTM3Q96MX0 182 aa4.39□□□□□ -1.71
USP49-205ENST00000448078 PARP11Q9NR21 331 aa4.39□□□□□ -1.71
USP49-205ENST00000448078 CMC2Q9NRP2 79 aa4.39□□□□□ -1.71
USP49-205ENST00000448078 ZNF355PQ9NSJ1 428 aa4.39□□□□□ -1.71
USP49-205ENST00000448078 CALYQ9NYX4 217 aa4.39□□□□□ -1.71
USP49-205ENST00000448078 NUFIP1Q9UHK0 495 aaKnown RBP4.39□□□□□ -1.71
USP49-205ENST00000448078 FOXA2Q9Y261 457 aaPredicted RBP4.39□□□□□ -1.71
USP49-205ENST00000448078 U3KQV3 271 aa4.39□□□□□ -1.71
USP49-205ENST00000448078 TNCP24821 2201 aa4.39□□□□□ -1.71
USP49-205ENST00000448078 IGHV3-72A0A0B4J1Y9 119 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 H3BN98 237 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 SYT7O43581 403 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 AIREO43918 545 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 BRI3O95415 125 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 OR2H2O95918 312 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 IGHV3-7P01780 117 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 CSN2P05814 226 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 CLUP10909 449 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 ALOX5APP20292 161 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 EPHA2P29317 976 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 HTR1FP30939 366 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 GLP1RP43220 463 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 REG1BP48304 166 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 KCNJ3P48549 501 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 PLGLAQ15195 96 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 MMDQ15546 238 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 ANKRD55Q3KP44 614 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 ZNF660Q6AZW8 331 aaPredicted RBP4.38□□□□□ -1.71
USP49-205ENST00000448078 TCF23Q7RTU1 214 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 ELMOD2Q8IZ81 293 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 OR9G4Q8NGQ1 327 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 RFESDQ8TAC1 157 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 MRGPRDQ8TDS7 321 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 PP6455Q8WZ26 134 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 TMEM106AQ96A25 262 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 C7orf34Q96L11 122 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 AMELYQ99218 206 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 OSBPL10Q9BXB5 764 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 PARD6BQ9BYG5 372 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 MAGIXQ9H6Y5 334 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 HMG20AQ9NP66 347 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 PLSCR3Q9NRY6 295 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 FAM206AQ9NX38 181 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 CMTM6Q9NX76 183 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 OR52A1Q9UKL2 312 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 V9GYS6 101 aa4.38□□□□□ -1.71
USP49-205ENST00000448078 HUWE1Q7Z6Z7 4374 aaKnown RBP4.38□□□□□ -1.71
USP49-205ENST00000448078 A0A087WW49 117 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 A0A0B4J203 849 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 A0A1W2PN81 502 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 A6NIN4 97 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 OR11H12B2RN74 326 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 SMIM1B2RUZ4 78 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 F8VVB4 439 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 F8VWA3 439 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 G3V318 75 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 FXYD1O00168 92 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 ENTPD6O75354 484 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 HLA-DRB1P01911 266 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 TFAP2AP05549 437 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 SLC2A2P11168 524 aaPredicted RBP4.37□□□□□ -1.71
USP49-205ENST00000448078 DBTP11182 482 aaKnown RBP4.37□□□□□ -1.71
USP49-205ENST00000448078 NCK1P16333 377 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 BCL3P20749 454 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 AADACP22760 399 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 BMI1P35226 326 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 CHRNA7P36544 502 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 CRIP2P52943 208 aaPredicted RBP4.37□□□□□ -1.71
USP49-205ENST00000448078 TPPP2P59282 170 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 KRTAP10-6P60371 365 aaPredicted RBP4.37□□□□□ -1.71
USP49-205ENST00000448078 RPL24P83731 157 aaKnown RBP4.37□□□□□ -1.71
USP49-205ENST00000448078 PLA2G7Q13093 441 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 PDZK1IP1Q13113 114 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 UBE2V1Q13404 147 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 KIAA0141Q14154 515 aaPredicted RBP4.37□□□□□ -1.71
USP49-205ENST00000448078 ZNF876PQ49A33 203 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 ACTBL2Q562R1 376 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 PAN3Q58A45 887 aaKnown RBP4.37□□□□□ -1.71
USP49-205ENST00000448078 LINC01590Q5TEZ4 76 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 BAIAP2L2Q6UXY1 529 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 Q8N6K4 173 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 C8orf31Q8N9H6 132 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms