RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 PROP1O75360 226 aa20.39■□□□□ 0.86
RFFL-206ENST00000447669 ADAP1O75689 374 aa20.39■□□□□ 0.86
RFFL-206ENST00000447669 TRAPPC2P0DI81 140 aa20.39■□□□□ 0.86
RFFL-206ENST00000447669 TRAPPC2BP0DI82 140 aa20.39■□□□□ 0.86
RFFL-206ENST00000447669 LCN2P80188 198 aa20.39■□□□□ 0.86
RFFL-206ENST00000447669 ZNF645Q8N7E2 425 aa20.39■□□□□ 0.86
RFFL-206ENST00000447669 PHB2Q99623 299 aa20.39■□□□□ 0.86
RFFL-206ENST00000447669 IFI27L2Q9H2X8 130 aa20.39■□□□□ 0.86
RFFL-206ENST00000447669 LPAR3Q9UBY5 353 aa20.39■□□□□ 0.86
RFFL-206ENST00000447669 ABCA2Q9BZC7 2435 aa20.39■□□□□ 0.86
RFFL-206ENST00000447669 IGHV4-61A0A0C4DH41 118 aa20.39■□□□□ 0.85
RFFL-206ENST00000447669 C3orf85A0A1B0GTC6 90 aa20.39■□□□□ 0.85
RFFL-206ENST00000447669 RPL39P5Q59GN2 51 aa20.39■□□□□ 0.85
RFFL-206ENST00000447669 CLEC2AQ6UVW9 174 aa20.39■□□□□ 0.85
RFFL-206ENST00000447669 CMTM1Q8IZ96 169 aa20.39■□□□□ 0.85
RFFL-206ENST00000447669 DRAXINQ8NBI3 349 aaPredicted RBP20.39■□□□□ 0.85
RFFL-206ENST00000447669 GLYATL2Q8WU03 294 aa20.39■□□□□ 0.85
RFFL-206ENST00000447669 SDHAF2Q9NX18 166 aa20.39■□□□□ 0.85
RFFL-206ENST00000447669 ONECUT1Q9UBC0 465 aa20.39■□□□□ 0.85
RFFL-206ENST00000447669 ZNF16P17020 682 aaPredicted RBP20.38■□□□□ 0.85
RFFL-206ENST00000447669 TMEM187Q14656 261 aa20.38■□□□□ 0.85
RFFL-206ENST00000447669 Q3ZCU0 254 aa20.38■□□□□ 0.85
RFFL-206ENST00000447669 CCDC71LQ8N9Z2 235 aa20.38■□□□□ 0.85
RFFL-206ENST00000447669 ZNF439Q8NDP4 499 aa20.38■□□□□ 0.85
RFFL-206ENST00000447669 LHFPL5Q8TAF8 219 aa20.38■□□□□ 0.85
RFFL-206ENST00000447669 PIMREGQ9BSJ6 248 aa20.38■□□□□ 0.85
RFFL-206ENST00000447669 NAV2Q8IVL1 2488 aa20.38■□□□□ 0.85
RFFL-206ENST00000447669 LOC105371242A0A075B767 164 aa20.37■□□□□ 0.85
RFFL-206ENST00000447669 MPTX1A8MV57 137 aa20.37■□□□□ 0.85
RFFL-206ENST00000447669 KIAA1324LA8MWY0 1029 aaPredicted RBP20.37■□□□□ 0.85
RFFL-206ENST00000447669 HNRNPCP07910 306 aaKnown RBP eCLIP20.37■□□□□ 0.854e-6■□□□□ 11.1
RFFL-206ENST00000447669 ABHD14AQ9BUJ0 271 aa20.37■□□□□ 0.85
RFFL-206ENST00000447669 GSX2Q9BZM3 304 aa20.37■□□□□ 0.85
RFFL-206ENST00000447669 LPAR2Q9HBW0 351 aa20.37■□□□□ 0.85
RFFL-206ENST00000447669 GPR37O15354 613 aa20.37■□□□□ 0.85
RFFL-206ENST00000447669 IGHV1-8P0DP01 117 aa20.37■□□□□ 0.85
RFFL-206ENST00000447669 RND3P61587 244 aa20.37■□□□□ 0.85
RFFL-206ENST00000447669 ARF6P62330 175 aa20.37■□□□□ 0.85
RFFL-206ENST00000447669 RPL30P62888 115 aaKnown RBP20.37■□□□□ 0.85
RFFL-206ENST00000447669 LY6G6FQ5SQ64 297 aa20.37■□□□□ 0.85
RFFL-206ENST00000447669 C11orf88Q6PI97 169 aa20.37■□□□□ 0.85
RFFL-206ENST00000447669 LY6G5BQ8NDX9 201 aa20.37■□□□□ 0.85
RFFL-206ENST00000447669 EDARADDQ8WWZ3 215 aa20.37■□□□□ 0.85
RFFL-206ENST00000447669 RAB9BQ9NP90 201 aa20.37■□□□□ 0.85
RFFL-206ENST00000447669 FAM25EA8MYX2 175 aa20.36■□□□□ 0.85
RFFL-206ENST00000447669 OR2B11Q5JQS5 317 aa20.36■□□□□ 0.85
RFFL-206ENST00000447669 C8orf46Q8TAG6 207 aa20.36■□□□□ 0.85
RFFL-206ENST00000447669 ZNF436Q9C0F3 470 aaPredicted RBP20.36■□□□□ 0.85
RFFL-206ENST00000447669 BARX1Q9HBU1 254 aaPredicted RBP20.36■□□□□ 0.85
RFFL-206ENST00000447669 MMP26Q9NRE1 261 aa20.36■□□□□ 0.85
RFFL-206ENST00000447669 KCNIP3Q9Y2W7 256 aa20.36■□□□□ 0.85
RFFL-206ENST00000447669 CELSR1Q9NYQ6 3014 aa20.36■□□□□ 0.85
RFFL-206ENST00000447669 DBX1A6NMT0 343 aa20.36■□□□□ 0.85
RFFL-206ENST00000447669 C17orf98A8MV24 154 aa20.36■□□□□ 0.85
RFFL-206ENST00000447669 VWC2LB2RUY7 222 aa20.36■□□□□ 0.85
RFFL-206ENST00000447669 RGS11O94810 467 aa20.36■□□□□ 0.85
RFFL-206ENST00000447669 HOXB5P09067 269 aa20.36■□□□□ 0.85
RFFL-206ENST00000447669 GPR12P47775 334 aa20.36■□□□□ 0.85
RFFL-206ENST00000447669 OR52M1Q8NGK5 317 aa20.36■□□□□ 0.85
RFFL-206ENST00000447669 GALNT14Q96FL9 552 aa20.36■□□□□ 0.85
RFFL-206ENST00000447669 SEC22AQ96IW7 307 aa20.36■□□□□ 0.85
RFFL-206ENST00000447669 PIPOXQ9P0Z9 390 aa20.36■□□□□ 0.85
RFFL-206ENST00000447669 FAM157AC9JC47 383 aa20.35■□□□□ 0.85
RFFL-206ENST00000447669 NKX2-5P52952 324 aaPredicted RBP20.35■□□□□ 0.85
RFFL-206ENST00000447669 Q5BKY6 102 aa20.35■□□□□ 0.85
RFFL-206ENST00000447669 FAM219AQ8IW50 185 aa20.35■□□□□ 0.85
RFFL-206ENST00000447669 ODF3L1Q8IXM7 274 aa20.35■□□□□ 0.85
RFFL-206ENST00000447669 LYG1Q8N1E2 194 aa20.35■□□□□ 0.85
RFFL-206ENST00000447669 MSI2Q96DH6 328 aaKnown RBP20.35■□□□□ 0.85
RFFL-206ENST00000447669 HECTD1Q9ULT8 2610 aa20.35■□□□□ 0.85
RFFL-206ENST00000447669 PAX1P15863 534 aa20.34■□□□□ 0.85
RFFL-206ENST00000447669 F2RP25116 425 aa20.34■□□□□ 0.85
RFFL-206ENST00000447669 EIF4EBP1Q13541 118 aaPredicted RBP20.34■□□□□ 0.85
RFFL-206ENST00000447669 Q8N7P7 452 aa20.34■□□□□ 0.85
RFFL-206ENST00000447669 COQ8AQ8NI60 647 aa20.34■□□□□ 0.85
RFFL-206ENST00000447669 AKR1E2Q96JD6 320 aa20.34■□□□□ 0.85
RFFL-206ENST00000447669 LINC00473A8K010 186 aa20.34■□□□□ 0.85
RFFL-206ENST00000447669 LIPFP07098 398 aa20.34■□□□□ 0.85
RFFL-206ENST00000447669 SIRT7Q9NRC8 400 aa20.34■□□□□ 0.85
RFFL-206ENST00000447669 SAA2-SAA4A0A096LPE2 208 aa20.33■□□□□ 0.85
RFFL-206ENST00000447669 C13orf42A0A1B0GVH6 325 aa20.33■□□□□ 0.85
RFFL-206ENST00000447669 SAA2P0DJI9 122 aaPredicted RBP20.33■□□□□ 0.85
RFFL-206ENST00000447669 CLEC12BQ2HXU8 276 aa20.33■□□□□ 0.85
RFFL-206ENST00000447669 SLC25A48Q6ZT89 311 aaKnown RBP20.33■□□□□ 0.85
RFFL-206ENST00000447669 LYZL2Q7Z4W2 148 aa20.33■□□□□ 0.85
RFFL-206ENST00000447669 LIAT1Q6ZQX7 453 aa20.32■□□□□ 0.84
RFFL-206ENST00000447669 OR10A7Q8NGE5 316 aa20.32■□□□□ 0.84
RFFL-206ENST00000447669 TMEM222Q9H0R3 208 aa20.32■□□□□ 0.84
RFFL-206ENST00000447669 ITPR2Q14571 2701 aa20.32■□□□□ 0.84
RFFL-206ENST00000447669 ANXA3P12429 323 aa20.32■□□□□ 0.84
RFFL-206ENST00000447669 BRWD1-AS2P59051 145 aa20.32■□□□□ 0.84
RFFL-206ENST00000447669 ABHD12Q8N2K0 398 aa20.32■□□□□ 0.84
RFFL-206ENST00000447669 M0R1X1 148 aa20.31■□□□□ 0.84
RFFL-206ENST00000447669 RAMP3O60896 148 aa20.31■□□□□ 0.84
RFFL-206ENST00000447669 COX7A1P24310 79 aa20.31■□□□□ 0.84
RFFL-206ENST00000447669 DIAPH2-AS1Q14236 149 aa20.31■□□□□ 0.84
RFFL-206ENST00000447669 PDZD9Q8IXQ8 264 aa20.31■□□□□ 0.84
RFFL-206ENST00000447669 OR5M8Q8NGP6 311 aa20.31■□□□□ 0.84
RFFL-206ENST00000447669 TMEM133Q9H2Q1 129 aa20.31■□□□□ 0.84
RFFL-206ENST00000447669 METTL8Q9H825 291 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms