RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	RBKS	Q9H477	322 aa		10.7	□□□□□ -0.7
DDR1-238	ENST00000446312	TNC	P24821	2201 aa		10.7	□□□□□ -0.7
DDR1-238	ENST00000446312	HLA-DRB3	P79483	266 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	FAM27B	Q5VT28	67 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	MCEMP1	Q8IX19	187 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	OR2J1	Q9GZK6	312 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	MSL2	Q9HCI7	577 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	DEPP	Q9NTK1	212 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	STRAP	Q9Y3F4	350 aa	Known RBP	10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	COL4A2	P08572	1712 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	CD300LB	A8K4G0	201 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	TRAPPC2L	H3BP13	241 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	GRP	P07492	148 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	SOX8	P57073	446 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	H3F3A	P84243	136 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	ARL6IP1	Q15041	203 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	RAB35	Q15286	201 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	GCNT2	Q8N0V5	402 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	PSMF1	Q92530	271 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	CORO2A	Q92828	525 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	SPSB1	Q96BD6	273 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	PLSCR2	Q9NRY7	297 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	ZFP30	Q9Y2G7	519 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	MRPL33	O75394	65 aa	Known RBP	10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	GCG	P01275	180 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	HIKESHI	Q53FT3	197 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	LHFPL2	Q6ZUX7	228 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	SMIM7	Q9BQ49	75 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	ACTR3C	Q9C0K3	210 aa	Predicted RBP	10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	ARV1	Q9H2C2	271 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	PSENEN	Q9NZ42	101 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	TAAR3P	Q9P1P4	343 aa		10.69	□□□□□ -0.7
DDR1-238	ENST00000446312	CCL25	O15444	150 aa		10.68	□□□□□ -0.7
DDR1-238	ENST00000446312	PDGFB	P01127	241 aa	Predicted RBP	10.68	□□□□□ -0.7
DDR1-238	ENST00000446312	SRF	P11831	508 aa		10.68	□□□□□ -0.7
DDR1-238	ENST00000446312	RAB30	Q15771	203 aa		10.68	□□□□□ -0.7
DDR1-238	ENST00000446312	ASPHD1	Q5U4P2	390 aa		10.68	□□□□□ -0.7
DDR1-238	ENST00000446312	CLDND2	Q8NHS1	167 aa		10.68	□□□□□ -0.7
DDR1-238	ENST00000446312	LHX4	Q969G2	390 aa		10.68	□□□□□ -0.7
DDR1-238	ENST00000446312	HIST1H2AA	Q96QV6	131 aa		10.68	□□□□□ -0.7
DDR1-238	ENST00000446312	RNF2	Q99496	336 aa		10.68	□□□□□ -0.7
DDR1-238	ENST00000446312	PCGF1	Q9BSM1	259 aa		10.68	□□□□□ -0.7
DDR1-238	ENST00000446312	CLN8	Q9UBY8	286 aa		10.68	□□□□□ -0.7
DDR1-238	ENST00000446312	XKRY2	A2RUG3	117 aa		10.68	□□□□□ -0.7
DDR1-238	ENST00000446312	SPINK4	O60575	86 aa		10.68	□□□□□ -0.7
DDR1-238	ENST00000446312	PGLYRP1	O75594	196 aa	Predicted RBP	10.68	□□□□□ -0.7
DDR1-238	ENST00000446312	CRYGS	P22914	178 aa		10.68	□□□□□ -0.7
DDR1-238	ENST00000446312	TMEM54	Q969K7	222 aa		10.68	□□□□□ -0.7
DDR1-238	ENST00000446312	GSX1	Q9H4S2	264 aa	Predicted RBP	10.68	□□□□□ -0.7
DDR1-238	ENST00000446312	ZNF430	Q9H8G1	570 aa	Predicted RBP	10.68	□□□□□ -0.7
DDR1-238	ENST00000446312	SEPSECS	Q9HD40	501 aa	Known RBP	10.68	□□□□□ -0.7
DDR1-238	ENST00000446312	LYRM2	Q9NU23	88 aa	Predicted RBP	10.68	□□□□□ -0.7
DDR1-238	ENST00000446312	ADGRG4	Q8IZF6	3080 aa		10.68	□□□□□ -0.7
DDR1-238	ENST00000446312	hCG_38984	A0A1B0GV85	526 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	FUT6	P51993	359 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	DSCR4	P56555	118 aa	Predicted RBP	10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	RPL19	P84098	196 aa	Known RBP	10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	DAZAP2	Q15038	168 aa	Predicted RBP	10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	GCSAML	Q5JQS6	135 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	OR10V1	Q8NGI7	309 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	OR4F5	Q8NH21	305 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	OR4F4	Q96R69	305 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	GPR35	Q9HC97	309 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	HPRT1	P00492	218 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	IGLV3-19	P01714	112 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	PAX9	P55771	341 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	EIF3I	Q13347	325 aa	Known RBP	10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	ZNF726P1	Q15940	193 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	CST9LP1	Q5W188	147 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	ZNF66	Q6ZN08	573 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	TMEM183A	Q8IXX5	376 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	MKX	Q8IYA7	352 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	C1orf87	Q8N0U7	546 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	OR51G1	Q8NGK1	321 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	MAFA	Q8NHW3	353 aa	Predicted RBP	10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	LYPD6B	Q8NI32	183 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	NUDT16L1	Q9BRJ7	211 aa	Known RBP	10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	TRAPPC2L	Q9UL33	140 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	TACC2	O95359	2948 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	C10orf142	B7Z368	130 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	RPL36A-HNRNPH2	H7BZ11	118 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	KLF3	P57682	345 aa	Predicted RBP	10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	MRPL49	Q13405	166 aa	Known RBP	10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	WDR74	Q6RFH5	385 aa	Predicted RBP	10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	FADS6	Q8N9I5	356 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	SIGLEC12	Q96PQ1	595 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	OR4C12	Q96R67	309 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312		Q9N2K0	584 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	FUT9	Q9Y231	359 aa		10.67	□□□□□ -0.7
DDR1-238	ENST00000446312	NKX6-3	A6NJ46	265 aa		10.66	□□□□□ -0.7
DDR1-238	ENST00000446312	NDUFS8	O00217	210 aa		10.66	□□□□□ -0.7
DDR1-238	ENST00000446312	FGF5	P12034	268 aa		10.66	□□□□□ -0.7
DDR1-238	ENST00000446312	G6PC	P35575	357 aa		10.66	□□□□□ -0.7
DDR1-238	ENST00000446312	ALKBH6	Q3KRA9	238 aa		10.66	□□□□□ -0.7
DDR1-238	ENST00000446312	C16orf82	Q7Z2V1	217 aa		10.66	□□□□□ -0.7
DDR1-238	ENST00000446312	ZDHHC16	Q969W1	377 aa		10.66	□□□□□ -0.7
DDR1-238	ENST00000446312	TMEM18	Q96B42	140 aa		10.66	□□□□□ -0.7
DDR1-238	ENST00000446312	SLC39A9	Q9NUM3	307 aa		10.66	□□□□□ -0.7
DDR1-238	ENST00000446312	FKBP11	Q9NYL4	201 aa		10.66	□□□□□ -0.7
DDR1-238	ENST00000446312	PAM16	Q9Y3D7	125 aa		10.66	□□□□□ -0.7

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