RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 FABP6P51161 128 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 PRSS8Q16651 343 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 FAM162BQ5T6X4 162 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 ZNF524Q96C55 264 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 SIGLEC12Q96PQ1 595 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 NPIPB13A6NJU9 1138 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 NPIPB4C9JG80 1138 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 PNKDQ8N490 385 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 ST6GALNAC3Q8NDV1 305 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 IFI44Q8TCB0 444 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 LSM10Q969L4 123 aaKnown RBP4.31□□□□□ -1.72
HERC1-201ENST00000443617 A0A1W2PQD3 144 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 H0YIG0 161 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 EDDM3BP56851 147 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 IZUMO4Q1ZYL8 232 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 LOXL4Q96JB6 756 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 GNB4Q9HAV0 340 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 ELOVL5Q9NYP7 299 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 TRAV9-1A0A075B6T8 112 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 OTOL1A6NHN0 477 aaPredicted RBP4.31□□□□□ -1.72
HERC1-201ENST00000443617 LCN12Q6JVE5 192 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 ZNF721Q8TF20 911 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 NAT6Q93015 286 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 RTN4RQ9BZR6 473 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 LIN7CQ9NUP9 197 aaKnown RBP4.31□□□□□ -1.72
HERC1-201ENST00000443617 CLCF1Q9UBD9 225 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 ARL2-SNX15V9GYD0 113 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 FOXI3A8MTJ6 420 aaPredicted RBP4.31□□□□□ -1.72
HERC1-201ENST00000443617 H3BMH7 237 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 RPL15P61313 204 aaKnown RBP4.31□□□□□ -1.72
HERC1-201ENST00000443617 KIAA0895LQ68EN5 471 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 ATOH7Q8N100 152 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 OR1K1Q8NGR3 316 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 RPL24P83731 157 aaKnown RBP4.31□□□□□ -1.72
HERC1-201ENST00000443617 COX19Q49B96 90 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 BATF2Q8N1L9 274 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 FAM60AQ9NP50 221 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 H0Y8X5 98 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 C19orf35Q6ZS72 473 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 ERRFI1Q9UJM3 462 aaPredicted RBP4.31□□□□□ -1.72
HERC1-201ENST00000443617 C17orf51A8MQB3 221 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 SHISA8B8ZZ34 492 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 RPS20P60866 119 aaKnown RBP4.31□□□□□ -1.72
HERC1-201ENST00000443617 SLC25A47Q6Q0C1 308 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 OR2AE1Q8NHA4 323 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 RNF115Q9Y4L5 304 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 IFNL4K9M1U5 179 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 OTX2P32243 289 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 TCL1AP56279 114 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 RDH5Q92781 318 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 LYZL4Q96KX0 146 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 C5orf63A6NC05 138 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 NIT1Q86X76 327 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 PATE1Q8WXA2 126 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 APOBEC3DQ96AK3 386 aaPredicted RBP4.31□□□□□ -1.72
HERC1-201ENST00000443617 LINC00869P0C866 280 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 RPS16P62249 146 aaKnown RBP4.31□□□□□ -1.72
HERC1-201ENST00000443617 KLHDC7BQ96G42 594 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 IGHV3-20A0A0C4DH32 117 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 IGHV2-70DA0A0C4DH43 119 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 GAGE10A6NGK3 116 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 TRAPPC2LH3BP13 241 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 TNFRSF4P43489 277 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 UBE2G1P62253 170 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 HYAL1Q12794 435 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 SLC37A2Q8TED4 501 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 OR5P3Q8WZ94 311 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 GPHA2Q96T91 129 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 MRPL13Q9BYD1 178 aaKnown RBP4.3□□□□□ -1.72
HERC1-201ENST00000443617 IGKV1D-43A0A0B4J1Z2 117 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 SPINK4O60575 86 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 ACSF3Q4G176 576 aaPredicted RBP4.3□□□□□ -1.72
HERC1-201ENST00000443617 SHISA6Q6ZSJ9 500 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 WNT10AQ9GZT5 417 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 GPX1P07203 203 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 SCTP09683 121 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 ACRP10323 421 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 NINJ1Q92982 152 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 SLC17A3O00476 420 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 HS3ST1O14792 307 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 ERASQ7Z444 233 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 ZNF319Q9P2F9 582 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 SIRPB1O00241 398 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 F2RP25116 425 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 OR2M3Q8NG83 312 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 ZNF430Q9H8G1 570 aaPredicted RBP4.3□□□□□ -1.72
HERC1-201ENST00000443617 RNF186Q9NXI6 227 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 IGHV2OR16-5A0A0B4J2B6 119 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 C1orf185Q5T7R7 199 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 H2BFWTQ7Z2G1 175 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 CRIPAKQ8N1N5 446 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 TXNDC17Q9BRA2 123 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 WDR87Q6ZQQ6 2873 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 NUDT3O95989 172 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 PMCHL1Q16048 86 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 MMD2Q8IY49 270 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 CLDN23Q96B33 292 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 OR2W1Q9Y3N9 320 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 FAM181BA6NEQ2 426 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 WISP1O95388 367 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms