RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 PRTGQ2VWP7 1150 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 C5orf47Q569G3 176 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 DMKNQ6E0U4 476 aaPredicted RBP2.41□□□□□ -2.02
LIG4-203ENST00000442234 CPEB2Q7Z5Q1 589 aaKnown RBP2.41□□□□□ -2.02
LIG4-203ENST00000442234 PAQR4Q8N4S7 273 aaPredicted RBP2.41□□□□□ -2.02
LIG4-203ENST00000442234 OR11H1Q8NG94 326 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 OR11H2Q8NH07 326 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 PPP1R35Q8TAP8 253 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 ZNF519Q8TB69 540 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 C2orf15Q8WU43 125 aaKnown RBP2.41□□□□□ -2.02
LIG4-203ENST00000442234 RNF133Q8WVZ7 376 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 GLYATL1Q969I3 302 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 PTX4Q96A99 478 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 PERPQ96FX8 193 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 FER1L6-AS2Q96M78 137 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 NAA38Q9BRA0 125 aaKnown RBP2.41□□□□□ -2.02
LIG4-203ENST00000442234 NRN1Q9NPD7 142 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 TMEM242Q9NWH2 141 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 FLRT3Q9NZU0 649 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 B4GALT7Q9UBV7 327 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 PSG8Q9UQ74 426 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 POLR1DQ9Y2S0 133 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 UBE2J1Q9Y385 318 aaPredicted RBP2.41□□□□□ -2.02
LIG4-203ENST00000442234 TNFRSF18Q9Y5U5 241 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 NOTCH4Q99466 2003 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 PPIAL4EA0A075B759 164 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 TRBV6-7A0A0A0MS04 114 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 MDFIC2A0A1B0GVS7 189 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 A0A1W2PQF6 199 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 MEGF11A6BM72 1044 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 SERINC4A6NH21 518 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 FGF10O15520 208 aaPredicted RBP2.41□□□□□ -2.02
LIG4-203ENST00000442234 KLK8O60259 260 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 HSBP1O75506 76 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 GCM2O75603 506 aaPredicted RBP2.41□□□□□ -2.02
LIG4-203ENST00000442234 SMIM17P0DL12 118 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 PPIAL4FP0DN26 164 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 MGST1P10620 155 aaKnown RBP2.41□□□□□ -2.02
LIG4-203ENST00000442234 AMY2BP19961 511 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 SFTPDP35247 375 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 ADRA1AP35348 466 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 NPBWR2P48146 333 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 DNASE1L1P49184 302 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 GNG3P63215 75 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 ARG2P78540 354 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 CCL20P78556 96 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 ROM1Q03395 351 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 ZNF90Q03938 601 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 ZNF77Q15935 545 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 ZNF260Q3ZCT1 412 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 ENTPD8Q5MY95 495 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 SLC25A34Q6PIV7 304 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 Q6ZS46 218 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 LGI3Q8N145 548 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 OR8B12Q8NGG6 310 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 OR5H2Q8NGV7 314 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 SCGB1C1Q8TD33 95 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 SLC38A5Q8WUX1 472 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 IGSF8Q969P0 613 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 GALMQ96C23 342 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 ZC2HC1AQ96GY0 325 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 PGLYRP3Q96LB9 341 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 TSSK2Q96PF2 358 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 NPY6RQ99463 290 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 QTRT1Q9BXR0 403 aaKnown RBP2.41□□□□□ -2.02
LIG4-203ENST00000442234 KCNK15Q9H427 330 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 STARD5Q9NSY2 213 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 OSER1Q9NX31 292 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 OCIAD1Q9NX40 245 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 GPR132Q9UNW8 380 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 OARD1Q9Y530 152 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 LRRC37A2A6NM11 1700 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 TEX48A0A1B0GUV7 120 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 IGLC7A0M8Q6 106 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 HHLA1C9JL84 531 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 ZNF878C9JN71 531 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 SDCBPO00560 298 aaPredicted RBP2.4□□□□□ -2.02
LIG4-203ENST00000442234 FCN1O00602 326 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 SFT2D2O95562 160 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 CD55P08174 381 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 SPINK8P0C7L1 97 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 COX6B1P14854 86 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 PVRP15151 417 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 KITLGP21583 273 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 LMO1P25800 156 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 TIA1P31483 386 aaKnown RBP eCLIP2.4□□□□□ -2.02
LIG4-203ENST00000442234 SSTR5P35346 364 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 GNG4P50150 75 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 ICAM4Q14773 271 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 RTP5Q14D33 572 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.4□□□□□ -2.02
LIG4-203ENST00000442234 ABCA11PQ4W5N1 156 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 GCSAMLQ5JQS6 135 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 ZNF506Q5JVG8 444 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 ACTL10Q5JWF8 245 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 FCRL6Q6DN72 434 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 DOLPP1Q86YN1 238 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 OR4N5Q8IXE1 308 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 ZBTB34Q8NCN2 500 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 OR52E1Q8NGJ3 308 aa2.4□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms