RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 MSRB3Q8IXL7 192 aa8.84□□□□□ -0.99
SYNE2-206ENST00000441438 OR5M3Q8NGP4 307 aa8.84□□□□□ -0.99
SYNE2-206ENST00000441438 PP6455Q8WZ26 134 aa8.84□□□□□ -0.99
SYNE2-206ENST00000441438 PKMYT1Q99640 499 aa8.84□□□□□ -0.99
SYNE2-206ENST00000441438 TUBA4BQ9H853 241 aa8.84□□□□□ -0.99
SYNE2-206ENST00000441438 CRXO43186 299 aaPredicted RBP8.83□□□□□ -1
SYNE2-206ENST00000441438 CSN2P05814 226 aa8.83□□□□□ -1
SYNE2-206ENST00000441438 FAM157CP0CG43 387 aa8.83□□□□□ -1
SYNE2-206ENST00000441438 PPIFP30405 207 aaKnown RBP8.83□□□□□ -1
SYNE2-206ENST00000441438 TAS2R20P59543 309 aa8.83□□□□□ -1
SYNE2-206ENST00000441438 DGCR2P98153 550 aa8.83□□□□□ -1
SYNE2-206ENST00000441438 LY6DQ14210 128 aa8.83□□□□□ -1
SYNE2-206ENST00000441438 OR1C1Q15619 314 aa8.83□□□□□ -1
SYNE2-206ENST00000441438 ZNF440Q8IYI8 595 aa8.83□□□□□ -1
SYNE2-206ENST00000441438 PLPP5Q8NEB5 264 aa8.83□□□□□ -1
SYNE2-206ENST00000441438 PGLYRP3Q96LB9 341 aa8.83□□□□□ -1
SYNE2-206ENST00000441438 S100A13Q99584 98 aa8.83□□□□□ -1
SYNE2-206ENST00000441438 GPR21Q99679 349 aa8.83□□□□□ -1
SYNE2-206ENST00000441438 EXOSC4Q9NPD3 245 aaKnown RBP8.83□□□□□ -1
SYNE2-206ENST00000441438 MCTS1Q9ULC4 181 aaKnown RBP8.83□□□□□ -1
SYNE2-206ENST00000441438 VWA8A3KMH1 1905 aa8.83□□□□□ -1
SYNE2-206ENST00000441438 GON4LQ3T8J9 2241 aa8.83□□□□□ -1
SYNE2-206ENST00000441438 TRIOO75962 3097 aa8.83□□□□□ -1
SYNE2-206ENST00000441438 M0R233 179 aa8.83□□□□□ -1
SYNE2-206ENST00000441438 APOA2P02652 100 aa8.83□□□□□ -1
SYNE2-206ENST00000441438 GLYATL3Q5SZD4 288 aa8.83□□□□□ -1
SYNE2-206ENST00000441438 TMEM64Q6YI46 380 aa8.83□□□□□ -1
SYNE2-206ENST00000441438 OR5AR1Q8NGP9 310 aa8.83□□□□□ -1
SYNE2-206ENST00000441438 LYRM2Q9NU23 88 aaPredicted RBP8.83□□□□□ -1
SYNE2-206ENST00000441438 OR5AC2Q9NZP5 309 aa8.83□□□□□ -1
SYNE2-206ENST00000441438 REV3LO60673 3130 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 TMEM202A6NGA9 273 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 GALR1P47211 349 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 PMVKQ15126 192 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 SLC25A35Q3KQZ1 300 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 PLA2G2CQ5R387 149 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 ARTNQ5T4W7 220 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 CDC20BQ86Y33 519 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 PIANPQ8IYJ0 282 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 VKORC1L1Q8N0U8 176 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 LOC107984640A0A0U1RRK4 108 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 B4DXG7 233 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 SOX14O95416 240 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 H1F0P07305 194 aaKnown RBP8.82□□□□□ -1
SYNE2-206ENST00000441438 ATP6V0CP27449 155 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 SHC1P29353 583 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 ZNF79Q15937 498 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 CR1LQ2VPA4 569 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 AWAT1Q58HT5 328 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 SLC35G3Q8N808 338 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 ZNF740Q8NDX6 193 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 LYSMD1Q96S90 227 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 OR51E2Q9H255 320 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 OR52D1Q9H346 318 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 ANXA10Q9UJ72 324 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 A0A1W2PRS3 328 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 TACR1P25103 407 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 G6PCP35575 357 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 EIF5AP63241 154 aaKnown RBP8.82□□□□□ -1
SYNE2-206ENST00000441438 PDGFRLQ15198 375 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 IQCJQ1A5X6 159 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 BCL2L15Q5TBC7 163 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 C9orf139Q6ZV77 190 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 SYT8Q8NBV8 401 aa8.82□□□□□ -1
SYNE2-206ENST00000441438 LIN37Q96GY3 246 aaPredicted RBP8.82□□□□□ -1
SYNE2-206ENST00000441438 A0A0G2JMM0 328 aa8.81□□□□□ -1
SYNE2-206ENST00000441438 A0A1W2PPB8 328 aa8.81□□□□□ -1
SYNE2-206ENST00000441438 DUXBA0A1W2PPF3 345 aa8.81□□□□□ -1
SYNE2-206ENST00000441438 KIR3DP1A8MWS1 328 aa8.81□□□□□ -1
SYNE2-206ENST00000441438 CPMP14384 443 aa8.81□□□□□ -1
SYNE2-206ENST00000441438 FABP4P15090 132 aa8.81□□□□□ -1
SYNE2-206ENST00000441438 GABRA3P34903 492 aa8.81□□□□□ -1
SYNE2-206ENST00000441438 UBE2E1P51965 193 aa8.81□□□□□ -1
SYNE2-206ENST00000441438 SRPXP78539 464 aa8.81□□□□□ -1
SYNE2-206ENST00000441438 DOK4Q8TEW6 326 aa8.81□□□□□ -1
SYNE2-206ENST00000441438 UBE2E2Q96LR5 201 aa8.81□□□□□ -1
SYNE2-206ENST00000441438 GINS4Q9BRT9 223 aa8.81□□□□□ -1
SYNE2-206ENST00000441438 SPANXCQ9NY87 97 aa8.81□□□□□ -1
SYNE2-206ENST00000441438 GAPDHSO14556 408 aaPredicted RBP8.81□□□□□ -1
SYNE2-206ENST00000441438 HLA-DQB1P01920 261 aa8.81□□□□□ -1
SYNE2-206ENST00000441438 NDUFA6P56556 154 aa8.81□□□□□ -1
SYNE2-206ENST00000441438 UBA52P62987 128 aaKnown RBP8.81□□□□□ -1
SYNE2-206ENST00000441438 FNDC7Q5VTL7 733 aa8.81□□□□□ -1
SYNE2-206ENST00000441438 RASL11AQ6T310 242 aa8.81□□□□□ -1
SYNE2-206ENST00000441438 PRSS41Q7RTY9 318 aa8.81□□□□□ -1
SYNE2-206ENST00000441438 MMD2Q8IY49 270 aa8.81□□□□□ -1
SYNE2-206ENST00000441438 TEX45Q8NA69 505 aa8.81□□□□□ -1
SYNE2-206ENST00000441438 HSD17B10Q99714 261 aaKnown RBP8.81□□□□□ -1
SYNE2-206ENST00000441438 OR2H1Q9GZK4 316 aa8.81□□□□□ -1
SYNE2-206ENST00000441438 H7BYZ3 331 aa8.8□□□□□ -1
SYNE2-206ENST00000441438 RFXAPO00287 272 aa8.8□□□□□ -1
SYNE2-206ENST00000441438 FABP7O15540 132 aa8.8□□□□□ -1
SYNE2-206ENST00000441438 PGAM2P15259 253 aa8.8□□□□□ -1
SYNE2-206ENST00000441438 GDF5P43026 501 aa8.8□□□□□ -1
SYNE2-206ENST00000441438 RPL24P83731 157 aaKnown RBP8.8□□□□□ -1
SYNE2-206ENST00000441438 RSPO4Q2I0M5 234 aaPredicted RBP8.8□□□□□ -1
SYNE2-206ENST00000441438 PIFOQ8TCI5 191 aa8.8□□□□□ -1
SYNE2-206ENST00000441438 PDCD1LG2Q9BQ51 273 aa8.8□□□□□ -1
SYNE2-206ENST00000441438 KLF16Q9BXK1 252 aaPredicted RBP8.8□□□□□ -1
SYNE2-206ENST00000441438 HES7Q9BYE0 225 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms