RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 TIMM9Q9Y5J7 89 aa6.87□□□□□ -1.31
SPIRE1-204ENST00000440472 ZFHX2Q9C0A1 2572 aaPredicted RBP6.87□□□□□ -1.31
SPIRE1-204ENST00000440472 SPINT2O43291 252 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 YPEL1O60688 119 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 CLDN14O95500 239 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 PRDX2P32119 198 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 RAB2AP61019 212 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 COL10A1Q03692 680 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 ZNF616Q08AN1 781 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 KRBOX4Q5JUW0 171 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 TMEM14EPQ6UXP3 125 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 TMEM182Q6ZP80 229 aaPredicted RBP6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 FAM57AQ8TBR7 257 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 MBD3L1Q8WWY6 194 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 NINJ1Q92982 152 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 YPEL2Q96QA6 119 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 TMEM231Q9H6L2 316 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 OR14J1Q9UGF5 321 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 PPP1R3CQ9UQK1 317 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 RBM7Q9Y580 266 aaKnown RBP6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 NCOR2Q9Y618 2525 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 USP24Q9UPU5 2620 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 ARID1AO14497 2285 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 INTS1Q8N201 2190 aaKnown RBP6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 A6NLC8 198 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 H7C2Y5 167 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 F2RL2O00254 374 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 WNT9BO14905 357 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 SIGLEC5O15389 551 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 RBFOX2O43251 390 aaKnown RBP eCLIP6.86□□□□□ -1.316e-8■■■■□ 21.8
SPIRE1-204ENST00000440472 MAS1LP35410 378 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 FABP6P51161 128 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 CLINT1Q14677 625 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 RHEBQ15382 184 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 LRRC75BQ2VPJ9 315 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 PDLIM3Q53GG5 364 aaPredicted RBP6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 SMUG1Q53HV7 270 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 ZNF506Q5JVG8 444 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 AKR1C8PQ5T2L2 129 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 PRAMEF6Q5VXH4 476 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 ZNF826PQ6ZT77 177 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 ZNF525Q8N782 197 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 C15orf54Q8N8G6 183 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 RNASE11Q8TAA1 199 aaKnown RBP6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 FAM213BQ8TBF2 198 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 Q8TCH9 128 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 LRRC29Q8WV35 223 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 PINX1Q96BK5 328 aaKnown RBP6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 MUCL1Q96DR8 90 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 CIB3Q96Q77 187 aaPredicted RBP6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 GPHA2Q96T91 129 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 PSENENQ9NZ42 101 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 KCNS2Q9ULS6 477 aa6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 CHD3Q12873 2000 aaKnown RBP6.86□□□□□ -1.31
SPIRE1-204ENST00000440472 SOX15O60248 233 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 CST7O76096 145 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 CRYAAP02489 173 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 HSPB1P04792 205 aaKnown RBP6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 CGB3P0DN86 165 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 CGB7P0DN87 165 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 KLF3P57682 345 aaPredicted RBP6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 UBE2KP61086 200 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 TNFRSF9Q07011 255 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 AESQ08117 197 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 RNF212Q495C1 297 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 KHDC3LQ587J8 217 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 CD177Q8N6Q3 437 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 NUP37Q8NFH4 326 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 C5orf30Q96GV9 206 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 MEGF10Q96KG7 1140 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 AGMATQ9BSE5 352 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 PARP12Q9H0J9 701 aaKnown RBP6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 LINC00574Q9H8X3 128 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 ELOVL5Q9NYP7 299 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 KLF2Q9Y5W3 355 aaPredicted RBP6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 GTF3C1Q12789 2109 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 TRAV39A0A0B4J263 110 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 RBFOX3A6NFN3 312 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 LRRC30A6NM36 301 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 EPHA1P21709 976 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 KIR2DS2P43631 304 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 GABRA2P47869 451 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 FHITP49789 147 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 GCSAMQ8N6F7 178 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 OR52L2PQ8NGH6 319 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 OR13A1Q8NGR1 328 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 SCGB1C1Q8TD33 95 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 S100PBPQ96BU1 408 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 FAM234AQ9H0X4 552 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 OR2D2Q9H210 308 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 MSL2Q9HCI7 577 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 KCNJ16Q9NPI9 418 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 OR6C3Q9NZP0 311 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 PRELID3BQ9Y3B1 194 aa6.85□□□□□ -1.31
SPIRE1-204ENST00000440472 IGKV1D-17A0A075B6S4 117 aa6.84□□□□□ -1.31
SPIRE1-204ENST00000440472 ODAMA1E959 279 aa6.84□□□□□ -1.31
SPIRE1-204ENST00000440472 COLCA2A8K830 154 aa6.84□□□□□ -1.31
SPIRE1-204ENST00000440472 A8MXE2 369 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms