RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 HIST1H2AAQ96QV6 131 aa12.93□□□□□ -0.34
CDC42EP4-202ENST00000439510 DEPPQ9NTK1 212 aa12.93□□□□□ -0.34
CDC42EP4-202ENST00000439510 DLL3Q9NYJ7 618 aa12.93□□□□□ -0.34
CDC42EP4-202ENST00000439510 PRSS50Q9UI38 385 aa12.93□□□□□ -0.34
CDC42EP4-202ENST00000439510 PCNX2A6NKB5 2137 aa12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 A0A1B0GV90 55 aa12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 ZNHIT1O43257 154 aa12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 CCL4P13236 92 aa12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 RAC2P15153 192 aa12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 MDKP21741 143 aaPredicted RBP12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 COL10A1Q03692 680 aa12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 ADIRFQ15847 76 aa12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 FAM58AQ8N1B3 248 aa12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 RPP25LQ8N5L8 163 aaKnown RBP12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 OR51G1Q8NGK1 321 aa12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 OR1P1Q8NH06 330 aa12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 ACTR3CQ9C0K3 210 aaPredicted RBP12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 TMEM9BQ9NQ34 198 aa12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 LIN7CQ9NUP9 197 aaKnown RBP12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 A0A096LPE4 126 aa12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 A0A1W2PPZ6 126 aa12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 ZNF503-AS2A6NEH8 195 aa12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 FAM90A26D6RGX4 464 aa12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 TMEM250H0YL14 139 aa12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 GZMBP10144 247 aa12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 Q0VFX4 171 aa12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 ZNF573Q86YE8 665 aa12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 LHX4Q969G2 390 aa12.92□□□□□ -0.34
CDC42EP4-202ENST00000439510 NGFP01138 241 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 IGKV1D-33P01593 117 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 IGKV1-33P01594 117 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 FGF7P21781 194 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 ELLP55199 621 aaPredicted RBP12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 IL1F10Q8WWZ1 152 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 SLC39A9Q9NUM3 307 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 ESPL1Q14674 2120 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 OR5B21A6NL26 309 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 SLC31A2O15432 143 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 GDF1P27539 372 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 SLC38A11Q08AI6 406 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 BSXQ3C1V8 233 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 LBHQ53QV2 105 aaPredicted RBP12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 SPANXN5Q5MJ07 72 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 PLA2G2CQ5R387 149 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 TMEM14EPQ6UXP3 125 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 MOB1BQ7L9L4 216 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 PPP1R3CQ9UQK1 317 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 UBE2L5PA0A1B0GUS4 154 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 APLNRP35414 380 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 CEACAM6P40199 344 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 PDLIM4P50479 330 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 RPL23P62829 140 aaKnown RBP12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 C9orf135Q5VTT2 229 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 POM121L2Q96KW2 1035 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 PKIBQ9C010 78 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 GAB2Q9UQC2 676 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 MPC1Q9Y5U8 109 aa12.91□□□□□ -0.34
CDC42EP4-202ENST00000439510 PTPRZ1P23471 2315 aaPredicted RBP12.9□□□□□ -0.34
CDC42EP4-202ENST00000439510 DCHS1Q96JQ0 3298 aa12.9□□□□□ -0.34
CDC42EP4-202ENST00000439510 PINLYPA6NC86 204 aa12.9□□□□□ -0.34
CDC42EP4-202ENST00000439510 PRR33A8MZF0 331 aa12.9□□□□□ -0.34
CDC42EP4-202ENST00000439510 CDX4O14627 284 aaPredicted RBP12.9□□□□□ -0.34
CDC42EP4-202ENST00000439510 TAS2R60P59551 318 aa12.9□□□□□ -0.34
CDC42EP4-202ENST00000439510 GNG3P63215 75 aa12.9□□□□□ -0.34
CDC42EP4-202ENST00000439510 TRA2AQ13595 282 aaKnown RBP eCLIP12.9□□□□□ -0.34
CDC42EP4-202ENST00000439510 AARDQ4LEZ3 155 aa12.9□□□□□ -0.34
CDC42EP4-202ENST00000439510 Q6P435 159 aa12.9□□□□□ -0.34
CDC42EP4-202ENST00000439510 OR1K1Q8NGR3 316 aa12.9□□□□□ -0.34
CDC42EP4-202ENST00000439510 ARGFXA6NJG6 315 aa12.9□□□□□ -0.34
CDC42EP4-202ENST00000439510 GZMHP20718 246 aa12.9□□□□□ -0.34
CDC42EP4-202ENST00000439510 PPP1R32Q7Z5V6 425 aa12.9□□□□□ -0.34
CDC42EP4-202ENST00000439510 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.9□□□□□ -0.34
CDC42EP4-202ENST00000439510 RAB24Q969Q5 203 aa12.9□□□□□ -0.34
CDC42EP4-202ENST00000439510 LAMP3Q9UQV4 416 aa12.9□□□□□ -0.34
CDC42EP4-202ENST00000439510 A8MWP6 167 aa12.89□□□□□ -0.35
CDC42EP4-202ENST00000439510 NTN3O00634 580 aaPredicted RBP12.89□□□□□ -0.35
CDC42EP4-202ENST00000439510 LILRA1O75019 489 aa12.89□□□□□ -0.35
CDC42EP4-202ENST00000439510 IGHEP01854 428 aa12.89□□□□□ -0.35
CDC42EP4-202ENST00000439510 G0S2P27469 103 aa12.89□□□□□ -0.35
CDC42EP4-202ENST00000439510 GALR1P47211 349 aa12.89□□□□□ -0.35
CDC42EP4-202ENST00000439510 FOXG1P55316 489 aaPredicted RBP12.89□□□□□ -0.35
CDC42EP4-202ENST00000439510 ACY3Q96HD9 319 aa12.89□□□□□ -0.35
CDC42EP4-202ENST00000439510 ZPBPQ9BS86 351 aa12.89□□□□□ -0.35
CDC42EP4-202ENST00000439510 C2orf88Q9BSF0 95 aa12.89□□□□□ -0.35
CDC42EP4-202ENST00000439510 ANKRD30BLA7E2S9 258 aa12.89□□□□□ -0.35
CDC42EP4-202ENST00000439510 H7BYZ3 331 aa12.89□□□□□ -0.35
CDC42EP4-202ENST00000439510 PSMB3P49720 205 aa12.89□□□□□ -0.35
CDC42EP4-202ENST00000439510 FAM3BP58499 235 aaPredicted RBP12.89□□□□□ -0.35
CDC42EP4-202ENST00000439510 TCF15Q12870 199 aa12.89□□□□□ -0.35
CDC42EP4-202ENST00000439510 ACSM6Q6P461 480 aa12.89□□□□□ -0.35
CDC42EP4-202ENST00000439510 TMEM170AQ8WVE7 144 aa12.89□□□□□ -0.35
CDC42EP4-202ENST00000439510 NOL4LQ96MY1 436 aaPredicted RBP12.89□□□□□ -0.35
CDC42EP4-202ENST00000439510 OR51I2Q9H344 312 aa12.89□□□□□ -0.35
CDC42EP4-202ENST00000439510 XKRY2A2RUG3 117 aa12.88□□□□□ -0.35
CDC42EP4-202ENST00000439510 PPP5D1E7EU14 171 aa12.88□□□□□ -0.35
CDC42EP4-202ENST00000439510 HRASP01112 189 aa12.88□□□□□ -0.35
CDC42EP4-202ENST00000439510 ARR3P36575 388 aa12.88□□□□□ -0.35
CDC42EP4-202ENST00000439510 ZNF497Q6ZNH5 498 aa12.88□□□□□ -0.35
CDC42EP4-202ENST00000439510 OR5B12Q96R08 314 aa12.88□□□□□ -0.35
CDC42EP4-202ENST00000439510 PARLQ9H300 379 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms