RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 IZUMO4Q1ZYL8 232 aa10.52□□□□□ -0.73
TCOF1-205ENST00000439160 LAMTOR1Q6IAA8 161 aa10.52□□□□□ -0.73
TCOF1-205ENST00000439160 DBX2Q6ZNG2 339 aa10.52□□□□□ -0.73
TCOF1-205ENST00000439160 LEAP2Q969E1 77 aa10.52□□□□□ -0.73
TCOF1-205ENST00000439160 REPIN1Q9BWE0 567 aaKnown RBP10.52□□□□□ -0.73
TCOF1-205ENST00000439160 RSPO3Q9BXY4 272 aaPredicted RBP10.52□□□□□ -0.73
TCOF1-205ENST00000439160 TUBG2Q9NRH3 451 aa10.52□□□□□ -0.73
TCOF1-205ENST00000439160 AMMECR1Q9Y4X0 333 aaPredicted RBP10.52□□□□□ -0.73
TCOF1-205ENST00000439160 SCN8AQ9UQD0 1980 aa10.52□□□□□ -0.73
TCOF1-205ENST00000439160 ATP6V1FQ16864 119 aa10.52□□□□□ -0.73
TCOF1-205ENST00000439160 Q56UQ5 140 aa10.52□□□□□ -0.73
TCOF1-205ENST00000439160 ZIC4Q8N9L1 334 aa10.52□□□□□ -0.73
TCOF1-205ENST00000439160 KDF1Q8NAX2 398 aaPredicted RBP10.52□□□□□ -0.73
TCOF1-205ENST00000439160 SEBOXQ9HB31 216 aaPredicted RBP10.52□□□□□ -0.73
TCOF1-205ENST00000439160 ZNF737O75373 536 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 CD200P41217 278 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 PTGDSP41222 190 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 SAXO1Q8IYX7 474 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 SNX22Q96L94 193 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 ABCA1O95477 2261 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 IGHV3-72A0A0B4J1Y9 119 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 IGKV1-9A0A0C4DH69 117 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 RAB29O14966 203 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 SMPD2O60906 423 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 PGLYRP1O75594 196 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-205ENST00000439160 DAOP14920 347 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 IGFBP3P17936 291 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-205ENST00000439160 ORM2P19652 201 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 RUNX1Q01196 453 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 PSG7Q13046 419 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 ACSF3Q4G176 576 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-205ENST00000439160 ASCL5Q7RTU5 278 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 FAM24BQ8N5W8 94 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 ZNRF1Q8ND25 227 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 FGFBP3Q8TAT2 258 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 RHOVQ96L33 236 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 C1QTNF5Q9BXJ0 243 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 FAM208BQ5VWN6 2430 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 CACNA1AO00555 2505 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 TRAV20A0A0B4J274 112 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 RAB4AP20338 218 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 ATP6V0CP27449 155 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 TIMM23BQ5SRD1 257 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 OR2T6Q8NHC8 308 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 LINC01560Q8TB33 94 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 ISOC2Q96AB3 205 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 BSCL2Q96G97 398 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-205ENST00000439160 MARS2Q96GW9 593 aaKnown RBP10.51□□□□□ -0.73
TCOF1-205ENST00000439160 ZNF345Q14585 488 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 ZNF385CQ66K41 422 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-205ENST00000439160 SLC16A13Q7RTY0 426 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 ZNF561Q8N587 486 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 ZNF714Q96N38 554 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 PCGF1Q9BSM1 259 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 WDR87Q6ZQQ6 2873 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 NOTCH3Q9UM47 2321 aa10.51□□□□□ -0.73
TCOF1-205ENST00000439160 HELZP42694 1942 aaKnown RBP10.5□□□□□ -0.73
TCOF1-205ENST00000439160 K7N7A8 449 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 SCGB1D1O95968 90 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 MBPP02686 304 aaPredicted RBP10.5□□□□□ -0.73
TCOF1-205ENST00000439160 GPR6P46095 362 aaPredicted RBP10.5□□□□□ -0.73
TCOF1-205ENST00000439160 SSX8Q7RTT4 187 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 TMEM252Q8N6L7 170 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 IL36RNQ9UBH0 155 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 ZDHHC8Q9ULC8 765 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 SHANK1Q9Y566 2161 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 H0Y980 276 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 SMIM15Q7Z3B0 74 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 OR10A7Q8NGE5 316 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 NUDT16L1Q9BRJ7 211 aaKnown RBP10.5□□□□□ -0.73
TCOF1-205ENST00000439160 HEXA-AS1Q9H8Q6 139 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 TIMM9Q9Y5J7 89 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 J3QR06 171 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 HLA-GP17693 338 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 SSTR5P35346 364 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 GLRXP35754 106 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 RHOBP62745 196 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 NRN1LQ496H8 165 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 FAM201AQ5SY85 155 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 GGNQ86UU5 652 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 C1QL1O75973 258 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 NPY1RP25929 384 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 PLAURQ03405 335 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 SRSF6Q13247 344 aaKnown RBP10.5□□□□□ -0.73
TCOF1-205ENST00000439160 OR5B3Q8NH48 314 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 TMEM171Q8WVE6 324 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 DIRC2Q96SL1 478 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 IFT22Q9H7X7 185 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 CALYQ9NYX4 217 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 SPRR3Q9UBC9 169 aa10.5□□□□□ -0.73
TCOF1-205ENST00000439160 SPG11Q96JI7 2443 aa10.49□□□□□ -0.73
TCOF1-205ENST00000439160 RBFOX3A6NFN3 312 aa10.49□□□□□ -0.73
TCOF1-205ENST00000439160 C19orf67A6NJJ6 358 aa10.49□□□□□ -0.73
TCOF1-205ENST00000439160 CNN1P51911 297 aaKnown RBP10.49□□□□□ -0.73
TCOF1-205ENST00000439160 ZNF660Q6AZW8 331 aaPredicted RBP10.49□□□□□ -0.73
TCOF1-205ENST00000439160 ZNF818PQ6ZRF7 136 aa10.49□□□□□ -0.73
TCOF1-205ENST00000439160 FGFRL1Q8N441 504 aa10.49□□□□□ -0.73
TCOF1-205ENST00000439160 PRNDQ9UKY0 176 aa10.49□□□□□ -0.73
TCOF1-205ENST00000439160 ZNF320A2RRD8 509 aa10.49□□□□□ -0.73
TCOF1-205ENST00000439160 J3QW42 95 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms