RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 FFAR4Q5NUL3 377 aa11.37□□□□□ -0.59
ACTN1-204ENST00000438964 CMTM2Q8TAZ6 248 aa11.37□□□□□ -0.59
ACTN1-204ENST00000438964 DNAJC4Q9NNZ3 241 aa11.37□□□□□ -0.59
ACTN1-204ENST00000438964 MTCH1Q9NZJ7 389 aa11.37□□□□□ -0.59
ACTN1-204ENST00000438964 C11orf94C9JXX5 98 aa11.36□□□□□ -0.59
ACTN1-204ENST00000438964 CEACAM16Q2WEN9 425 aa11.36□□□□□ -0.59
ACTN1-204ENST00000438964 COA6Q5JTJ3 125 aaKnown RBP11.36□□□□□ -0.59
ACTN1-204ENST00000438964 ZNF709Q8N972 641 aa11.36□□□□□ -0.59
ACTN1-204ENST00000438964 OR2J1Q9GZK6 312 aa11.36□□□□□ -0.59
ACTN1-204ENST00000438964 ZDHHC11Q9H8X9 412 aa11.36□□□□□ -0.59
ACTN1-204ENST00000438964 CBY1Q9Y3M2 126 aa11.36□□□□□ -0.59
ACTN1-204ENST00000438964 RBFOX2O43251 390 aaKnown RBP eCLIP11.36□□□□□ -0.592e-6■■□□□ 13.9
ACTN1-204ENST00000438964 SERF1AO75920 110 aa11.36□□□□□ -0.59
ACTN1-204ENST00000438964 OR10J1P30954 320 aa11.36□□□□□ -0.59
ACTN1-204ENST00000438964 FUT6P51993 359 aa11.36□□□□□ -0.59
ACTN1-204ENST00000438964 RPP30P78346 268 aaKnown RBP11.36□□□□□ -0.59
ACTN1-204ENST00000438964 ZNF816Q0VGE8 651 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-204ENST00000438964 KIAA1644Q3SXP7 199 aa11.36□□□□□ -0.59
ACTN1-204ENST00000438964 ZNF808Q8N4W9 903 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-204ENST00000438964 ZCCHC14Q8WYQ9 949 aaKnown RBP11.36□□□□□ -0.59
ACTN1-204ENST00000438964 R3HDM4Q96D70 268 aa11.36□□□□□ -0.59
ACTN1-204ENST00000438964 ZNF703Q9H7S9 590 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-204ENST00000438964 ICE1Q9Y2F5 2266 aa11.36□□□□□ -0.59
ACTN1-204ENST00000438964 KIR2DL5BA0A0G2JN68 375 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 KIR2DL5BA0A0G2JPC4 375 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 PDLIM4P50479 330 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 SUMO3P55854 103 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-204ENST00000438964 KIR2DL5AQ8N109 375 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 OR5D13Q8NGL4 314 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 OR1L1Q8NH94 360 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 PLPPR2Q96GM1 343 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 MMP17Q9ULZ9 603 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 MRPS18CQ9Y3D5 142 aaKnown RBP11.35□□□□□ -0.59
ACTN1-204ENST00000438964 PTRH2Q9Y3E5 179 aaKnown RBP11.35□□□□□ -0.59
ACTN1-204ENST00000438964 hCG_38984A0A1B0GV85 526 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 H0Y980 276 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 RAMP3O60896 148 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 DRD1P21728 446 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 ETFRF1Q6IPR1 90 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 PCSK4Q6UW60 755 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 CPEB3Q8NE35 698 aaKnown RBP11.35□□□□□ -0.59
ACTN1-204ENST00000438964 SPACA9Q96E40 222 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-204ENST00000438964 P2RX4Q99571 388 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 TP53TG3Q9ULZ0 132 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 SH2D1BO14796 132 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 HOXA6P31267 233 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 G6PCP35575 357 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 PPP1CBP62140 327 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 HBG1P69891 147 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 HBG2P69892 147 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 HYAL1Q12794 435 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 ACOT6Q3I5F7 207 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-204ENST00000438964 ZNF573Q86YE8 665 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 IFI44Q8TCB0 444 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 RNASE8Q8TDE3 154 aaKnown RBP11.35□□□□□ -0.59
ACTN1-204ENST00000438964 BTF3L4Q96K17 158 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 RAB40CQ96S21 281 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 SAMD10Q9BYL1 202 aa11.35□□□□□ -0.59
ACTN1-204ENST00000438964 CFAP47Q6ZTR5 3102 aa11.34□□□□□ -0.59
ACTN1-204ENST00000438964 CCKARP32238 428 aa11.34□□□□□ -0.59
ACTN1-204ENST00000438964 FAM27BQ5VT28 67 aa11.34□□□□□ -0.59
ACTN1-204ENST00000438964 TMEM54Q969K7 222 aa11.34□□□□□ -0.59
ACTN1-204ENST00000438964 CLDN23Q96B33 292 aa11.34□□□□□ -0.59
ACTN1-204ENST00000438964 WNT5BQ9H1J7 359 aa11.34□□□□□ -0.59
ACTN1-204ENST00000438964 TP73-AS1Q9UF72 201 aa11.34□□□□□ -0.59
ACTN1-204ENST00000438964 ZFAND5O76080 213 aa11.34□□□□□ -0.59
ACTN1-204ENST00000438964 TFF1P04155 84 aa11.34□□□□□ -0.59
ACTN1-204ENST00000438964 EDDM3BP56851 147 aa11.34□□□□□ -0.59
ACTN1-204ENST00000438964 C10orf128Q5T292 105 aa11.34□□□□□ -0.59
ACTN1-204ENST00000438964 TGIF2LYQ8IUE0 185 aa11.34□□□□□ -0.59
ACTN1-204ENST00000438964 ZNF552Q9H707 407 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-204ENST00000438964 RYDENQ9NUL5 291 aaKnown RBP11.34□□□□□ -0.59
ACTN1-204ENST00000438964 CHCHD2Q9Y6H1 151 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-204ENST00000438964 BOD1L1Q8NFC6 3051 aa11.34□□□□□ -0.59
ACTN1-204ENST00000438964 A0A0G2JMM0 328 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 A0A1W2PPB8 328 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 A0A1W2PRS3 328 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 KIR3DP1A8MWS1 328 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 TP53I11O14683 189 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 TOX3O15405 576 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-204ENST00000438964 NGFP01138 241 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 FOXG1P55316 489 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-204ENST00000438964 LINC00310P59036 64 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 RPL15P61313 204 aaKnown RBP11.33□□□□□ -0.6
ACTN1-204ENST00000438964 GNB1P62873 340 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 PRDX4Q13162 271 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 RNF151Q2KHN1 245 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 KCNIP4Q6PIL6 250 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 KMT5CQ86Y97 462 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 CADM4Q8NFZ8 388 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 VAMP8Q9BV40 100 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 WNT10AQ9GZT5 417 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 TMEM106BQ9NUM4 274 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 KIAA1549Q9HCM3 1950 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 DUX1O43812 170 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 GGCTO75223 188 aaKnown RBP11.33□□□□□ -0.6
ACTN1-204ENST00000438964 SCRG1O75711 98 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 S100A7P31151 101 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 MAJINQ3KP22 176 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms