RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 DIRAS3O95661 229 aa12.97□□□□□ -0.33
SNRPB-202ENST00000438552 GAPDHP04406 335 aaKnown RBP12.97□□□□□ -0.33
SNRPB-202ENST00000438552 BRS3P32247 399 aa12.97□□□□□ -0.33
SNRPB-202ENST00000438552 PRSS3P35030 304 aa12.97□□□□□ -0.33
SNRPB-202ENST00000438552 CBX5P45973 191 aa12.97□□□□□ -0.33
SNRPB-202ENST00000438552 RNASE12Q5GAN4 147 aaKnown RBP12.97□□□□□ -0.33
SNRPB-202ENST00000438552 DHRS7BQ6IAN0 325 aaPredicted RBP12.97□□□□□ -0.33
SNRPB-202ENST00000438552 CNIH2Q6PI25 160 aa12.97□□□□□ -0.33
SNRPB-202ENST00000438552 TGIF2LXQ8IUE1 241 aa12.97□□□□□ -0.33
SNRPB-202ENST00000438552 EDARADDQ8WWZ3 215 aa12.97□□□□□ -0.33
SNRPB-202ENST00000438552 ABHD14BQ96IU4 210 aa12.97□□□□□ -0.33
SNRPB-202ENST00000438552 ANXA10Q9UJ72 324 aa12.97□□□□□ -0.33
SNRPB-202ENST00000438552 COL6A5A8TX70 2615 aa12.96□□□□□ -0.33
SNRPB-202ENST00000438552 IGHV3-72A0A0B4J1Y9 119 aa12.96□□□□□ -0.33
SNRPB-202ENST00000438552 LANCL1O43813 399 aa12.96□□□□□ -0.33
SNRPB-202ENST00000438552 LPLP06858 475 aa12.96□□□□□ -0.33
SNRPB-202ENST00000438552 SNRNP70P08621 437 aaKnown RBP12.96□□□□□ -0.33
SNRPB-202ENST00000438552 ARPC4P59998 168 aa12.96□□□□□ -0.33
SNRPB-202ENST00000438552 RELBQ01201 579 aa12.96□□□□□ -0.33
SNRPB-202ENST00000438552 RPL39P5Q59GN2 51 aa12.96□□□□□ -0.33
SNRPB-202ENST00000438552 MOB3BQ86TA1 216 aa12.96□□□□□ -0.33
SNRPB-202ENST00000438552 CAPSLQ8WWF8 208 aa12.96□□□□□ -0.33
SNRPB-202ENST00000438552 RBMXL1Q96E39 390 aaKnown RBP12.96□□□□□ -0.33
SNRPB-202ENST00000438552 MRPL20Q9BYC9 149 aaKnown RBP12.96□□□□□ -0.33
SNRPB-202ENST00000438552 NXF2Q9GZY0 626 aaKnown RBP12.96□□□□□ -0.33
SNRPB-202ENST00000438552 TOLLIPQ9H0E2 274 aa12.96□□□□□ -0.33
SNRPB-202ENST00000438552 C1RLQ9NZP8 487 aa12.96□□□□□ -0.33
SNRPB-202ENST00000438552 ADAM30Q9UKF2 790 aa12.96□□□□□ -0.33
SNRPB-202ENST00000438552 PITPNC1Q9UKF7 332 aa12.96□□□□□ -0.33
SNRPB-202ENST00000438552 ANAPC10Q9UM13 185 aa12.96□□□□□ -0.33
SNRPB-202ENST00000438552 ITGB1BP1O14713 200 aa12.95□□□□□ -0.34
SNRPB-202ENST00000438552 TXNL1O43396 289 aa12.95□□□□□ -0.34
SNRPB-202ENST00000438552 CRYBA1P05813 215 aa12.95□□□□□ -0.34
SNRPB-202ENST00000438552 HKR1P10072 659 aa12.95□□□□□ -0.34
SNRPB-202ENST00000438552 LIAT1Q6ZQX7 453 aa12.95□□□□□ -0.34
SNRPB-202ENST00000438552 ZNF833PQ6ZTB9 187 aa12.95□□□□□ -0.34
SNRPB-202ENST00000438552 H1FOOQ8IZA3 346 aaPredicted RBP12.95□□□□□ -0.34
SNRPB-202ENST00000438552 GPX8Q8TED1 209 aa12.95□□□□□ -0.34
SNRPB-202ENST00000438552 AGMATQ9BSE5 352 aa12.95□□□□□ -0.34
SNRPB-202ENST00000438552 RNF150Q9ULK6 438 aa12.95□□□□□ -0.34
SNRPB-202ENST00000438552 RAB29O14966 203 aa12.94□□□□□ -0.34
SNRPB-202ENST00000438552 OR8U9P0C7N5 309 aa12.94□□□□□ -0.34
SNRPB-202ENST00000438552 NFYAP23511 347 aaPredicted RBP12.94□□□□□ -0.34
SNRPB-202ENST00000438552 GPR12P47775 334 aa12.94□□□□□ -0.34
SNRPB-202ENST00000438552 RAG2P55895 527 aa12.94□□□□□ -0.34
SNRPB-202ENST00000438552 RPL15P61313 204 aaKnown RBP12.94□□□□□ -0.34
SNRPB-202ENST00000438552 HES1Q14469 280 aa12.94□□□□□ -0.34
SNRPB-202ENST00000438552 HABP2Q14520 560 aaPredicted RBP12.94□□□□□ -0.34
SNRPB-202ENST00000438552 OR8U1Q8NH10 309 aa12.94□□□□□ -0.34
SNRPB-202ENST00000438552 ZNF251Q9BRH9 671 aa12.94□□□□□ -0.34
SNRPB-202ENST00000438552 OR2D2Q9H210 308 aa12.94□□□□□ -0.34
SNRPB-202ENST00000438552 PIPOXQ9P0Z9 390 aa12.94□□□□□ -0.34
SNRPB-202ENST00000438552 FAM90A9PA6NNJ1 464 aa12.93□□□□□ -0.34
SNRPB-202ENST00000438552 ZNF736B4DX44 427 aaPredicted RBP12.93□□□□□ -0.34
SNRPB-202ENST00000438552 J3QRK9 145 aa12.93□□□□□ -0.34
SNRPB-202ENST00000438552 IGKV1D-33P01593 117 aa12.93□□□□□ -0.34
SNRPB-202ENST00000438552 IGKV1-33P01594 117 aa12.93□□□□□ -0.34
SNRPB-202ENST00000438552 CTXN2P0C2S0 81 aa12.93□□□□□ -0.34
SNRPB-202ENST00000438552 LSAMPQ13449 338 aa12.93□□□□□ -0.34
SNRPB-202ENST00000438552 FAM71F2Q6NXP2 309 aa12.93□□□□□ -0.34
SNRPB-202ENST00000438552 DIRAS2Q96HU8 199 aa12.93□□□□□ -0.34
SNRPB-202ENST00000438552 ABHD1Q96SE0 405 aa12.93□□□□□ -0.34
SNRPB-202ENST00000438552 S1PR3Q99500 378 aa12.93□□□□□ -0.34
SNRPB-202ENST00000438552 NABP2Q9BQ15 211 aa12.93□□□□□ -0.34
SNRPB-202ENST00000438552 SLC25A33Q9BSK2 321 aa12.93□□□□□ -0.34
SNRPB-202ENST00000438552 SCPEP1Q9HB40 452 aa12.93□□□□□ -0.34
SNRPB-202ENST00000438552 RAB18Q9NP72 206 aa12.93□□□□□ -0.34
SNRPB-202ENST00000438552 NECAP2Q9NVZ3 263 aa12.93□□□□□ -0.34
SNRPB-202ENST00000438552 ZNF221Q9UK13 617 aa12.93□□□□□ -0.34
SNRPB-202ENST00000438552 RBM7Q9Y580 266 aaKnown RBP12.93□□□□□ -0.34
SNRPB-202ENST00000438552 TMEM89A2RUT3 159 aa12.92□□□□□ -0.34
SNRPB-202ENST00000438552 NDUFA7O95182 113 aa12.92□□□□□ -0.34
SNRPB-202ENST00000438552 FAM106CPP0CH98 169 aa12.92□□□□□ -0.34
SNRPB-202ENST00000438552 TMEM11P17152 192 aa12.92□□□□□ -0.34
SNRPB-202ENST00000438552 NAT1P18440 290 aa12.92□□□□□ -0.34
SNRPB-202ENST00000438552 HNF4GQ14541 408 aa12.92□□□□□ -0.34
SNRPB-202ENST00000438552 CDK10Q15131 360 aa12.92□□□□□ -0.34
SNRPB-202ENST00000438552 Q6ZSV7 163 aa12.92□□□□□ -0.34
SNRPB-202ENST00000438552 OR5AP2Q8NGF4 316 aa12.92□□□□□ -0.34
SNRPB-202ENST00000438552 OR52I2Q8NH67 350 aa12.92□□□□□ -0.34
SNRPB-202ENST00000438552 C5orf30Q96GV9 206 aa12.92□□□□□ -0.34
SNRPB-202ENST00000438552 A3GALT2U3KPV4 340 aa12.92□□□□□ -0.34
SNRPB-202ENST00000438552 TENM1Q9UKZ4 2725 aa12.91□□□□□ -0.34
SNRPB-202ENST00000438552 DNHD1Q96M86 4753 aa12.91□□□□□ -0.34
SNRPB-202ENST00000438552 IGKV1D-13A0A0B4J2D9 117 aa12.91□□□□□ -0.34
SNRPB-202ENST00000438552 SULT1C2O00338 296 aa12.91□□□□□ -0.34
SNRPB-202ENST00000438552 OR2F2O95006 317 aa12.91□□□□□ -0.34
SNRPB-202ENST00000438552 OR5H8P0DN80 308 aa12.91□□□□□ -0.34
SNRPB-202ENST00000438552 IGKV1-13P0DP09 117 aa12.91□□□□□ -0.34
SNRPB-202ENST00000438552 MDKP21741 143 aaPredicted RBP12.91□□□□□ -0.34
SNRPB-202ENST00000438552 CD1BP29016 333 aa12.91□□□□□ -0.34
SNRPB-202ENST00000438552 TNFSF8P32971 234 aa12.91□□□□□ -0.34
SNRPB-202ENST00000438552 RCVRNP35243 200 aa12.91□□□□□ -0.34
SNRPB-202ENST00000438552 DGCR2P98153 550 aa12.91□□□□□ -0.34
SNRPB-202ENST00000438552 IL18Q14116 193 aa12.91□□□□□ -0.34
SNRPB-202ENST00000438552 FAM131AQ6UXB0 335 aa12.91□□□□□ -0.34
SNRPB-202ENST00000438552 GLDNQ6ZMI3 551 aaPredicted RBP12.91□□□□□ -0.34
SNRPB-202ENST00000438552 THNSL2Q86YJ6 484 aa12.91□□□□□ -0.34
SNRPB-202ENST00000438552 RBM14Q96PK6 669 aaKnown RBP12.91□□□□□ -0.34
SNRPB-202ENST00000438552 NPFFR1Q9GZQ6 430 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 196.6 ms