RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 C10orf111Q8N326 155 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 MRGPRDQ8TDS7 321 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 ALKBH3Q96Q83 286 aaPredicted RBP10.1□□□□□ -0.79
PTCH1-209ENST00000437951 MFRPQ9BY79 579 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 ZGRF1Q86YA3 2104 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 DOCK8Q8NF50 2099 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 LOC390937A0A1W2PQ73 354 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 ASPDHA6ND91 283 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 TDHQ8IZJ6 230 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 CNRIP1Q96F85 164 aaPredicted RBP10.1□□□□□ -0.79
PTCH1-209ENST00000437951 LOC105371267A0A1B0GV96 52 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 LILRA5A6NI73 299 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 WNT9BO14905 357 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 FBLN7Q53RD9 439 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 SDHCQ99643 169 aaPredicted RBP10.1□□□□□ -0.79
PTCH1-209ENST00000437951 SF3B5Q9BWJ5 86 aaKnown RBP10.1□□□□□ -0.79
PTCH1-209ENST00000437951 SFXN3Q9BWM7 321 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 FRRS1LQ9P0K9 344 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 TRAV8-2A0A0B4J237 113 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 RNF224P0DH78 156 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 NKG7Q16617 165 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 PHLDA3Q9Y5J5 127 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 SCN5AQ14524 2016 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 ETHE1O95571 254 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 CA7P43166 264 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 TNFAIP6P98066 277 aaPredicted RBP10.1□□□□□ -0.79
PTCH1-209ENST00000437951 LRRC29Q8WV35 223 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 RAB1BQ9H0U4 201 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 MBD1Q9UIS9 605 aaPredicted RBP10.1□□□□□ -0.79
PTCH1-209ENST00000437951 TRAV8-4A0A0B4J246 113 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 MNX1P50219 401 aaPredicted RBP10.1□□□□□ -0.79
PTCH1-209ENST00000437951 GGTLC2Q14390 218 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 TIMM23BQ5SRD1 257 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 CCDC144NLQ6NUI1 221 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 ASB5Q8WWX0 329 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 RGPD4Q7Z3J3 1758 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 TRAV8-7A0A075B6U6 113 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 J3QR06 171 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 F12P00748 615 aaPredicted RBP10.1□□□□□ -0.79
PTCH1-209ENST00000437951 INSL4Q14641 139 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 LINC01559Q495D7 138 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 C2orf83Q53S99 150 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 MEIG1Q5JSS6 88 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 FAM222BQ8WU58 562 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 DEFB127Q9H1M4 99 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 TRAV39A0A0B4J263 110 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 H3BRM9 83 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 CHST5Q9GZS9 411 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 PKD1L3Q7Z443 1732 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 KCNE1BA0A087WTH5 132 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 TMPRSS3P57727 454 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 SEC11AP67812 179 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 TSPO2Q5TGU0 170 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 HCFC2Q9Y5Z7 792 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 TMEM177Q53S58 311 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 MESTQ5EB52 335 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 SPATA46Q5T0L3 261 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 Q6AWC8 147 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 RFLNAQ6ZTI6 216 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 CACNA1IQ9P0X4 2223 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 ZNF774Q6NX45 483 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 PGLYRP3Q96LB9 341 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 TMEM222Q9H0R3 208 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 ZNF257Q9Y2Q1 563 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 CACNA1BQ00975 2339 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 ERVH48-1M5A8F1 160 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 FTH1P19P0C7X4 201 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 FSTP19883 344 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 TMEM108Q6UXF1 575 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 HARBI1Q96MB7 349 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 TLNRD1Q9H1K6 362 aa10.09□□□□□ -0.79
PTCH1-209ENST00000437951 PPIHO43447 177 aaKnown RBP10.08□□□□□ -0.8
PTCH1-209ENST00000437951 TMEM190Q8WZ59 177 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 SMOC1Q9H4F8 434 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 TRAV30A0A087WSZ9 112 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 EML2O95834 649 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 CKS1BP61024 79 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 PGPEP1Q9NXJ5 209 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 TUBGCP6Q96RT7 1819 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 TRBV23-1A0A0A0MS06 115 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 B4GALNT1Q00973 533 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 EBLN2Q6P2I7 272 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 METTL26Q96S19 204 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 IGLV3-27P01718 113 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 RAE1P78406 368 aaKnown RBP10.08□□□□□ -0.8
PTCH1-209ENST00000437951 SLC25A2Q9BXI2 301 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 KCNMB2Q9Y691 235 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 HLA-DQB1P01920 261 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 PSG2P11465 335 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 FGF5P12034 268 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 SMAD4Q13485 552 aaKnown RBP10.08□□□□□ -0.8
PTCH1-209ENST00000437951 GCSAMLQ5JQS6 135 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 LILRA3Q8N6C8 439 aaPredicted RBP10.08□□□□□ -0.8
PTCH1-209ENST00000437951 OR13H1Q8NG92 308 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 PGLYRP4Q96LB8 373 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 LAMTOR2Q9Y2Q5 125 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 IGHV3-20A0A0C4DH32 117 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 CEACAM18A8MTB9 384 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 APOMO95445 188 aa10.08□□□□□ -0.8
PTCH1-209ENST00000437951 ZNF32P17041 273 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms