RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 NPVFQ9HCQ7 196 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 NAT2P11245 290 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 Q6ZN92 141 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 MYOZ3Q8TDC0 251 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 CD1BP29016 333 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 SERF2P84101 59 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 APELAP0DMC3 54 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 RRN3P1Q2M238 152 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 NPIPB13A6NJU9 1138 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 NPIPB4C9JG80 1138 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 HTN1P15515 57 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 OR4C5Q8NGB2 326 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 OPN4Q9UHM6 478 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 HSD17B13Q7Z5P4 300 aaPredicted RBP13.72□□□□□ -0.21
PTPN13-204ENST00000436978 GP6Q9HCN6 339 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 SIAH2O43255 324 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 HIST1H1BP16401 226 aaKnown RBP13.72□□□□□ -0.21
PTPN13-204ENST00000436978 REG1BP48304 166 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 STPG2Q8N412 459 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 MRPL24Q96A35 216 aaKnown RBP13.72□□□□□ -0.21
PTPN13-204ENST00000436978 CEP290O15078 2479 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 GREM1O60565 184 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 ZNF735P0CB33 412 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 MPV17P39210 176 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 SELENOTP62341 195 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 IDI2-AS1Q9NZ38 188 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 METTL1Q9UBP6 276 aaKnown RBP13.72□□□□□ -0.21
PTPN13-204ENST00000436978 FREM3P0C091 2139 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 C16orf92Q96LL3 132 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 J3QW42 95 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 DLL1O00548 723 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 PRSS1P07477 247 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 RPL8P62917 257 aaKnown RBP13.72□□□□□ -0.21
PTPN13-204ENST00000436978 ZPLD1Q8TCW7 415 aa13.72□□□□□ -0.21
PTPN13-204ENST00000436978 ERVS71-1P61550 626 aa13.71□□□□□ -0.21
PTPN13-204ENST00000436978 IL19Q9UHD0 177 aa13.71□□□□□ -0.21
PTPN13-204ENST00000436978 HILPDAQ9Y5L2 63 aa13.71□□□□□ -0.21
PTPN13-204ENST00000436978 DNAJC13O75165 2243 aa13.71□□□□□ -0.21
PTPN13-204ENST00000436978 CFDP00746 253 aaPredicted RBP13.71□□□□□ -0.21
PTPN13-204ENST00000436978 APCSP02743 223 aa13.71□□□□□ -0.21
PTPN13-204ENST00000436978 HOXA6P31267 233 aa13.71□□□□□ -0.21
PTPN13-204ENST00000436978 RPL27AP46776 148 aaKnown RBP13.71□□□□□ -0.21
PTPN13-204ENST00000436978 BVESQ8NE79 360 aa13.71□□□□□ -0.21
PTPN13-204ENST00000436978 VPS25Q9BRG1 176 aa13.71□□□□□ -0.21
PTPN13-204ENST00000436978 FER1L5A0AVI2 2057 aa13.71□□□□□ -0.21
PTPN13-204ENST00000436978 VWA8A3KMH1 1905 aa13.71□□□□□ -0.21
PTPN13-204ENST00000436978 PTGDSP41222 190 aa13.71□□□□□ -0.21
PTPN13-204ENST00000436978 CSRP2Q16527 193 aa13.71□□□□□ -0.21
PTPN13-204ENST00000436978 SPRED2Q7Z698 418 aa13.71□□□□□ -0.21
PTPN13-204ENST00000436978 MIXL1Q9H2W2 232 aa13.71□□□□□ -0.21
PTPN13-204ENST00000436978 HS3ST3B1Q9Y662 390 aa13.71□□□□□ -0.21
PTPN13-204ENST00000436978 NEURL2Q9BR09 285 aa13.71□□□□□ -0.21
PTPN13-204ENST00000436978 PRR13Q9NZ81 148 aa13.71□□□□□ -0.21
PTPN13-204ENST00000436978 CENPVL1A0A0U1RR11 272 aa13.71□□□□□ -0.22
PTPN13-204ENST00000436978 TM4SF20Q53R12 229 aa13.71□□□□□ -0.22
PTPN13-204ENST00000436978 MMD2Q8IY49 270 aa13.71□□□□□ -0.22
PTPN13-204ENST00000436978 H1FOOQ8IZA3 346 aaPredicted RBP13.71□□□□□ -0.22
PTPN13-204ENST00000436978 SCNM1Q9BWG6 230 aa13.71□□□□□ -0.22
PTPN13-204ENST00000436978 TRAV30A0A087WSZ9 112 aa13.71□□□□□ -0.22
PTPN13-204ENST00000436978 B9A039 149 aa13.71□□□□□ -0.22
PTPN13-204ENST00000436978 NANOS3P60323 173 aaKnown RBP13.71□□□□□ -0.22
PTPN13-204ENST00000436978 ITLN1Q8WWA0 313 aa13.71□□□□□ -0.22
PTPN13-204ENST00000436978 HSF4Q9ULV5 492 aa13.71□□□□□ -0.22
PTPN13-204ENST00000436978 SEC11BP0C7V7 166 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 LAMTOR1Q6IAA8 161 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 TMEM91Q6ZNR0 172 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 LTBP1Q14766 1721 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 KIR2DL2P43627 348 aaPredicted RBP13.7□□□□□ -0.22
PTPN13-204ENST00000436978 PCOLCEQ15113 449 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 ALX4Q9H161 411 aaPredicted RBP13.7□□□□□ -0.22
PTPN13-204ENST00000436978 PRNTQ86SH4 94 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 SMIM10L1P0DMW3 83 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 SPANXN1Q5VSR9 72 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 PCSK4Q6UW60 755 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 ZCCHC14Q8WYQ9 949 aaKnown RBP13.7□□□□□ -0.22
PTPN13-204ENST00000436978 SMIM10Q96HG1 83 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 ELOVL1Q9BW60 279 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 TMEM191AQ9H0A3 160 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 LPAR5Q9H1C0 372 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 RTTNQ86VV8 2226 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 TRBV5-5A0A0J9YX44 114 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 DLK1P80370 383 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 MGAT2Q10469 447 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 TMEM78Q5T7P6 136 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 RCC2Q9P258 522 aaKnown RBP13.7□□□□□ -0.22
PTPN13-204ENST00000436978 RHBDL1O75783 438 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 TWIST1Q15672 202 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 C10orf111Q8N326 155 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 FAM24BQ8N5W8 94 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 MED19A0JLT2 244 aaPredicted RBP13.7□□□□□ -0.22
PTPN13-204ENST00000436978 CDRT15L2A8MXV6 281 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 UBE2L6O14933 153 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 SPINK2P20155 84 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 PSG9Q00887 426 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 DHRS11Q6UWP2 260 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 TMEM54Q969K7 222 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 SRD5A3Q9H8P0 318 aa13.7□□□□□ -0.22
PTPN13-204ENST00000436978 PHOX2AO14813 284 aa13.69□□□□□ -0.22
PTPN13-204ENST00000436978 LRRC75BQ2VPJ9 315 aa13.69□□□□□ -0.22
PTPN13-204ENST00000436978 IGKV3-7A0A075B6H7 116 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms