RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 GCSAMQ8N6F7 178 aa13.97□□□□□ -0.17
LIMK1-203ENST00000435201 TPRX1Q8N7U7 411 aa13.97□□□□□ -0.17
LIMK1-203ENST00000435201 C5orf30Q96GV9 206 aa13.97□□□□□ -0.17
LIMK1-203ENST00000435201 SCRT1Q9BWW7 348 aa13.97□□□□□ -0.17
LIMK1-203ENST00000435201 A8MXE2 369 aa13.97□□□□□ -0.17
LIMK1-203ENST00000435201 MGST3O14880 152 aa13.97□□□□□ -0.17
LIMK1-203ENST00000435201 F12P00748 615 aaPredicted RBP13.97□□□□□ -0.17
LIMK1-203ENST00000435201 GZMHP20718 246 aa13.97□□□□□ -0.17
LIMK1-203ENST00000435201 NPBWR1P48145 328 aa13.97□□□□□ -0.17
LIMK1-203ENST00000435201 PPT1P50897 306 aa13.97□□□□□ -0.17
LIMK1-203ENST00000435201 SELENOVP59797 346 aa13.97□□□□□ -0.17
LIMK1-203ENST00000435201 TMEM267Q0VDI3 215 aaPredicted RBP13.97□□□□□ -0.17
LIMK1-203ENST00000435201 EDARADDQ8WWZ3 215 aa13.97□□□□□ -0.17
LIMK1-203ENST00000435201 EIF5A2Q9GZV4 153 aaKnown RBP13.97□□□□□ -0.17
LIMK1-203ENST00000435201 SMDT1Q9H4I9 107 aa13.97□□□□□ -0.17
LIMK1-203ENST00000435201 LAMP3Q9UQV4 416 aa13.97□□□□□ -0.17
LIMK1-203ENST00000435201 ODAMA1E959 279 aa13.96□□□□□ -0.17
LIMK1-203ENST00000435201 ATP6V1G2-DDX39BF2Z307 99 aa13.96□□□□□ -0.17
LIMK1-203ENST00000435201 IAPPP10997 89 aa13.96□□□□□ -0.17
LIMK1-203ENST00000435201 GATA4P43694 442 aa13.96□□□□□ -0.17
LIMK1-203ENST00000435201 RPL30P62888 115 aaKnown RBP13.96□□□□□ -0.17
LIMK1-203ENST00000435201 HBG1P69891 147 aa13.96□□□□□ -0.17
LIMK1-203ENST00000435201 HBG2P69892 147 aa13.96□□□□□ -0.17
LIMK1-203ENST00000435201 EDDM3AQ14507 147 aa13.96□□□□□ -0.17
LIMK1-203ENST00000435201 AKR1C8PQ5T2L2 129 aa13.96□□□□□ -0.17
LIMK1-203ENST00000435201 VHLLQ6RSH7 139 aa13.96□□□□□ -0.17
LIMK1-203ENST00000435201 MOGAT3Q86VF5 341 aa13.96□□□□□ -0.17
LIMK1-203ENST00000435201 TCTEX1D2Q8WW35 142 aa13.96□□□□□ -0.17
LIMK1-203ENST00000435201 HSD17B10Q99714 261 aaKnown RBP13.96□□□□□ -0.17
LIMK1-203ENST00000435201 ESRP2Q9H6T0 727 aaKnown RBP13.96□□□□□ -0.17
LIMK1-203ENST00000435201 RIF1Q5UIP0 2472 aaKnown RBP13.96□□□□□ -0.17
LIMK1-203ENST00000435201 PRRG2O14669 202 aa13.95□□□□□ -0.18
LIMK1-203ENST00000435201 RAMP3O60896 148 aa13.95□□□□□ -0.18
LIMK1-203ENST00000435201 CLDN1O95832 211 aa13.95□□□□□ -0.18
LIMK1-203ENST00000435201 LHBP01229 141 aa13.95□□□□□ -0.18
LIMK1-203ENST00000435201 P0C879 139 aa13.95□□□□□ -0.18
LIMK1-203ENST00000435201 CR1LQ2VPA4 569 aa13.95□□□□□ -0.18
LIMK1-203ENST00000435201 SLC25A24Q6NUK1 477 aa13.95□□□□□ -0.18
LIMK1-203ENST00000435201 TMEM88Q6PEY1 159 aa13.95□□□□□ -0.18
LIMK1-203ENST00000435201 LRFN3Q9BTN0 628 aa13.95□□□□□ -0.18
LIMK1-203ENST00000435201 KCNJ16Q9NPI9 418 aa13.95□□□□□ -0.18
LIMK1-203ENST00000435201 JPT1Q9UK76 154 aa13.95□□□□□ -0.18
LIMK1-203ENST00000435201 ZFHX2Q9C0A1 2572 aaPredicted RBP13.95□□□□□ -0.18
LIMK1-203ENST00000435201 CFAP47Q6ZTR5 3102 aa13.95□□□□□ -0.18
LIMK1-203ENST00000435201 SPRY3O43610 288 aa13.95□□□□□ -0.18
LIMK1-203ENST00000435201 H2AFB1P0C5Y9 115 aa13.95□□□□□ -0.18
LIMK1-203ENST00000435201 BMP5P22003 454 aa13.95□□□□□ -0.18
LIMK1-203ENST00000435201 UBE2KP61086 200 aa13.95□□□□□ -0.18
LIMK1-203ENST00000435201 RUNX1Q01196 453 aa13.95□□□□□ -0.18
LIMK1-203ENST00000435201 MRGPRGQ86SM5 289 aa13.95□□□□□ -0.18
LIMK1-203ENST00000435201 ABHD17AQ96GS6 310 aa13.95□□□□□ -0.18
LIMK1-203ENST00000435201 HSPB7Q9UBY9 170 aa13.95□□□□□ -0.18
LIMK1-203ENST00000435201 NDRG3Q9UGV2 375 aa13.95□□□□□ -0.18
LIMK1-203ENST00000435201 IGHV3-43A0A0B4J1X8 118 aa13.94□□□□□ -0.18
LIMK1-203ENST00000435201 CLDN14O95500 239 aa13.94□□□□□ -0.18
LIMK1-203ENST00000435201 IGHV3-43DP0DP04 118 aa13.94□□□□□ -0.18
LIMK1-203ENST00000435201 TDGF1P3P51864 188 aa13.94□□□□□ -0.18
LIMK1-203ENST00000435201 TLE4Q04727 773 aa13.94□□□□□ -0.18
LIMK1-203ENST00000435201 TNFRSF9Q07011 255 aa13.94□□□□□ -0.18
LIMK1-203ENST00000435201 FAM27E3Q08E93 113 aa13.94□□□□□ -0.18
LIMK1-203ENST00000435201 ZNF816Q0VGE8 651 aaPredicted RBP13.94□□□□□ -0.18
LIMK1-203ENST00000435201 FAM53AQ6NSI3 398 aaPredicted RBP13.94□□□□□ -0.18
LIMK1-203ENST00000435201 CBLN2Q8IUK8 224 aa13.94□□□□□ -0.18
LIMK1-203ENST00000435201 KDF1Q8NAX2 398 aaPredicted RBP13.94□□□□□ -0.18
LIMK1-203ENST00000435201 RFESDQ8TAC1 157 aa13.94□□□□□ -0.18
LIMK1-203ENST00000435201 SCGB1C1Q8TD33 95 aa13.94□□□□□ -0.18
LIMK1-203ENST00000435201 ITLN1Q8WWA0 313 aa13.94□□□□□ -0.18
LIMK1-203ENST00000435201 HIPK2Q9H2X6 1198 aa13.94□□□□□ -0.18
LIMK1-203ENST00000435201 NCOR1P1Q9H4R4 102 aa13.94□□□□□ -0.18
LIMK1-203ENST00000435201 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.94□□□□□ -0.18
LIMK1-203ENST00000435201 PSG11Q9UQ72 335 aa13.94□□□□□ -0.18
LIMK1-203ENST00000435201 SSUH2Q9Y2M2 353 aa13.94□□□□□ -0.18
LIMK1-203ENST00000435201 RFNGQ9Y644 331 aa13.94□□□□□ -0.18
LIMK1-203ENST00000435201 MED19A0JLT2 244 aaPredicted RBP13.93□□□□□ -0.18
LIMK1-203ENST00000435201 C17orf98A8MV24 154 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 RAB29O14966 203 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 ST8SIA5O15466 376 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 S1PR2O95136 353 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 KRASP01116 189 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 METTL15P1P0C7V9 234 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 CD40P25942 277 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 G6PCP35575 357 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 RAB2AP61019 212 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 OR2B11Q5JQS5 317 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 BTNL3Q6UXE8 466 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 CD300LFQ8TDQ1 290 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 AGMATQ9BSE5 352 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 DCTN5Q9BTE1 182 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 MRPL37Q9BZE1 423 aaKnown RBP13.93□□□□□ -0.18
LIMK1-203ENST00000435201 ELOVL5Q9NYP7 299 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 IL19Q9UHD0 177 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 TP53TG5Q9Y2B4 290 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 IGHV3OR15-7A0A075B7D8 119 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 HBE1P02100 147 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 OR8U8P0C7N1 319 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 Q3ZCU0 254 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 SPRNQ5BIV9 151 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 SPSB3Q6PJ21 355 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 THNSL2Q86YJ6 484 aa13.93□□□□□ -0.18
LIMK1-203ENST00000435201 DOLPP1Q86YN1 238 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms