RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 RNF7Q9UBF6 113 aa10.24□□□□□ -0.77
CLDN4-203ENST00000435050 WDFY3Q8IZQ1 3526 aa10.24□□□□□ -0.77
CLDN4-203ENST00000435050 IGSF23A1L1A6 192 aa10.24□□□□□ -0.77
CLDN4-203ENST00000435050 TMEM218A2RU14 115 aa10.24□□□□□ -0.77
CLDN4-203ENST00000435050 GUCA2BQ16661 112 aa10.24□□□□□ -0.77
CLDN4-203ENST00000435050 EIF2S3LQ2VIR3 472 aaKnown RBP10.24□□□□□ -0.77
CLDN4-203ENST00000435050 Q6ZPA2 131 aa10.24□□□□□ -0.77
CLDN4-203ENST00000435050 C18orf12Q96KH6 178 aa10.24□□□□□ -0.77
CLDN4-203ENST00000435050 EGLN1Q9GZT9 426 aa10.24□□□□□ -0.77
CLDN4-203ENST00000435050 CLN8Q9UBY8 286 aa10.24□□□□□ -0.77
CLDN4-203ENST00000435050 FAM215AQ9Y5M1 114 aa10.24□□□□□ -0.77
CLDN4-203ENST00000435050 SNAPINO95295 136 aa10.24□□□□□ -0.77
CLDN4-203ENST00000435050 SFTA3P0C7M3 94 aa10.24□□□□□ -0.77
CLDN4-203ENST00000435050 ATRAIDQ6UW56 229 aa10.24□□□□□ -0.77
CLDN4-203ENST00000435050 ZNF497Q6ZNH5 498 aa10.24□□□□□ -0.77
CLDN4-203ENST00000435050 FGFRL1Q8N441 504 aa10.24□□□□□ -0.77
CLDN4-203ENST00000435050 SNRNP40Q96DI7 357 aaKnown RBP10.24□□□□□ -0.77
CLDN4-203ENST00000435050 RBMXL1Q96E39 390 aaKnown RBP10.24□□□□□ -0.77
CLDN4-203ENST00000435050 MEGF10Q96KG7 1140 aa10.24□□□□□ -0.77
CLDN4-203ENST00000435050 SFXN3Q9BWM7 321 aa10.24□□□□□ -0.77
CLDN4-203ENST00000435050 COL25A1Q9BXS0 654 aaPredicted RBP10.24□□□□□ -0.77
CLDN4-203ENST00000435050 MRPL37Q9BZE1 423 aaKnown RBP10.24□□□□□ -0.77
CLDN4-203ENST00000435050 CYTL1Q9NRR1 136 aa10.24□□□□□ -0.77
CLDN4-203ENST00000435050 ODAMA1E959 279 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 OR4A8P0C604 315 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 EGR1P18146 543 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 UCP1P25874 307 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 CD40P25942 277 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 GLRXP35754 106 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 KCNJ3P48549 501 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 NUBP1P53384 320 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 SRSF3P84103 164 aaKnown RBP10.23□□□□□ -0.77
CLDN4-203ENST00000435050 ZNF324BQ6AW86 544 aaPredicted RBP10.23□□□□□ -0.77
CLDN4-203ENST00000435050 S1PR3Q99500 378 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 RAXQ9Y2V3 346 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 WNK2Q9Y3S1 2297 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 MBD3L4A6NDZ8 208 aaPredicted RBP10.23□□□□□ -0.77
CLDN4-203ENST00000435050 MBD3L3A6NE82 208 aaPredicted RBP10.23□□□□□ -0.77
CLDN4-203ENST00000435050 MBD3L5A6NJ08 208 aaPredicted RBP10.23□□□□□ -0.77
CLDN4-203ENST00000435050 NKX6-3A6NJ46 265 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 DFFBO76075 338 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 FGF2P09038 288 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 MUC1P15941 1255 aaPredicted RBP10.23□□□□□ -0.77
CLDN4-203ENST00000435050 HOXA1P49639 335 aaPredicted RBP10.23□□□□□ -0.77
CLDN4-203ENST00000435050 VKORC1L1Q8N0U8 176 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 MBD3L2Q8NHZ7 208 aaPredicted RBP10.23□□□□□ -0.77
CLDN4-203ENST00000435050 SAP30LQ9HAJ7 183 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 GNG13Q9P2W3 67 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 TUBD1Q9UJT1 453 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 CACNA1BQ00975 2339 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 KIAA1549Q9HCM3 1950 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 ABCA1O95477 2261 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 S1PR2O95136 353 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 COX5AP20674 150 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 NKX6-1P78426 367 aaPredicted RBP10.23□□□□□ -0.77
CLDN4-203ENST00000435050 GUK1Q16774 197 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 OR5D13Q8NGL4 314 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 RXFP4Q8TDU9 374 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 UQCC1Q9NVA1 299 aa10.23□□□□□ -0.77
CLDN4-203ENST00000435050 TNFRSF1AP19438 455 aa10.22□□□□□ -0.77
CLDN4-203ENST00000435050 SRSF4Q08170 494 aaKnown RBP10.22□□□□□ -0.77
CLDN4-203ENST00000435050 TESK1Q15569 626 aa10.22□□□□□ -0.77
CLDN4-203ENST00000435050 DOLPP1Q86YN1 238 aa10.22□□□□□ -0.77
CLDN4-203ENST00000435050 NBL1P41271 181 aa10.22□□□□□ -0.77
CLDN4-203ENST00000435050 ZNF674Q2M3X9 581 aa10.22□□□□□ -0.77
CLDN4-203ENST00000435050 PCSK4Q6UW60 755 aa10.22□□□□□ -0.77
CLDN4-203ENST00000435050 IGFL2Q6UWQ7 119 aa10.22□□□□□ -0.77
CLDN4-203ENST00000435050 CBLN2Q8IUK8 224 aa10.22□□□□□ -0.77
CLDN4-203ENST00000435050 RSG1Q9BU20 258 aa10.22□□□□□ -0.77
CLDN4-203ENST00000435050 PIEZO1Q92508 2521 aa10.22□□□□□ -0.77
CLDN4-203ENST00000435050 A0A0G2JRQ6 117 aa10.22□□□□□ -0.77
CLDN4-203ENST00000435050 ENSAO43768 121 aaKnown RBP10.22□□□□□ -0.77
CLDN4-203ENST00000435050 FGF8P55075 233 aaPredicted RBP10.22□□□□□ -0.77
CLDN4-203ENST00000435050 SOHLH1Q5JUK2 328 aa10.22□□□□□ -0.77
CLDN4-203ENST00000435050 SEM1Q6ZVN7 128 aa10.22□□□□□ -0.77
CLDN4-203ENST00000435050 FAM216BQ8N7L0 139 aa10.22□□□□□ -0.77
CLDN4-203ENST00000435050 BOD1Q96IK1 185 aa10.22□□□□□ -0.77
CLDN4-203ENST00000435050 RAB40CQ96S21 281 aa10.22□□□□□ -0.77
CLDN4-203ENST00000435050 WFDC1Q9HC57 220 aa10.22□□□□□ -0.77
CLDN4-203ENST00000435050 BOD1L1Q8NFC6 3051 aa10.22□□□□□ -0.77
CLDN4-203ENST00000435050 FRYQ5TBA9 3013 aa10.22□□□□□ -0.77
CLDN4-203ENST00000435050 SHOXO15266 292 aa10.22□□□□□ -0.77
CLDN4-203ENST00000435050 RAMP3O60896 148 aa10.22□□□□□ -0.77
CLDN4-203ENST00000435050 USB1Q9BQ65 265 aaKnown RBP10.22□□□□□ -0.77
CLDN4-203ENST00000435050 IFT22Q9H7X7 185 aa10.22□□□□□ -0.77
CLDN4-203ENST00000435050 STRAPQ9Y3F4 350 aaKnown RBP10.22□□□□□ -0.77
CLDN4-203ENST00000435050 C17orf98A8MV24 154 aa10.21□□□□□ -0.77
CLDN4-203ENST00000435050 CCL21O00585 134 aa10.21□□□□□ -0.77
CLDN4-203ENST00000435050 MGST3O14880 152 aa10.21□□□□□ -0.77
CLDN4-203ENST00000435050 SOX15O60248 233 aa10.21□□□□□ -0.77
CLDN4-203ENST00000435050 GZMHP20718 246 aa10.21□□□□□ -0.77
CLDN4-203ENST00000435050 SULT1A2P50226 295 aa10.21□□□□□ -0.77
CLDN4-203ENST00000435050 BSPH1Q075Z2 132 aa10.21□□□□□ -0.77
CLDN4-203ENST00000435050 ZNF146Q15072 292 aa10.21□□□□□ -0.77
CLDN4-203ENST00000435050 LINC01560Q8TB33 94 aa10.21□□□□□ -0.77
CLDN4-203ENST00000435050 REG4Q9BYZ8 158 aa10.21□□□□□ -0.77
CLDN4-203ENST00000435050 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.21□□□□□ -0.77
CLDN4-203ENST00000435050 A8MXE2 369 aa10.21□□□□□ -0.78
CLDN4-203ENST00000435050 RPL39P5Q59GN2 51 aa10.21□□□□□ -0.78
CLDN4-203ENST00000435050 OR10P1Q8NGE3 313 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms