RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 NDUFB7P17568 137 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 HOXA5P20719 270 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 P2RY1P47900 373 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 UCP2P55851 309 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 ERVFRD-1P60508 538 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 SPANXN5Q5MJ07 72 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 FAM214BQ7L5A3 538 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 CACNG5Q9UF02 275 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 PIEZO1Q92508 2521 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 SOD3P08294 240 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 FOSL1P15407 271 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 ATP6V0CP27449 155 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 SSTR5P35346 364 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 RND3P61587 244 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 HEPN1Q6WQI6 88 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 OR5A2Q8NGI9 324 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 GPR137BO60478 399 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 DEFA4P12838 97 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 ELLP55199 621 aaPredicted RBP13.18□□□□□ -0.3
SCARF1-203ENST00000434376 SSX2Q16385 188 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 KHDC3LQ587J8 217 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 RTL6Q6ICC9 239 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 OR5T1Q8NG75 326 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 TMEM45BQ96B21 275 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 WSB1Q9Y6I7 421 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 BTBD17A6NE02 478 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 SMPD2O60906 423 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 SEC11BP0C7V7 166 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 LYL1P12980 280 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 MMP9P14780 707 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 ZNF880Q6PDB4 577 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 DMRTC2Q8IXT2 367 aaPredicted RBP13.18□□□□□ -0.3
SCARF1-203ENST00000434376 RTL8AQ9BWD3 113 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 TRDCB7Z8K6 153 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 TSTD3H0UI37 97 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 HIST1H2BKO60814 126 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 HIST1H2BJP06899 126 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 HIST1H2BOP23527 126 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 GCH1P30793 250 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 HIST1H2BBP33778 126 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 DYNLT3P51808 116 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 FGF8P55075 233 aaPredicted RBP13.18□□□□□ -0.3
SCARF1-203ENST00000434376 HIST1H2BDP58876 126 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 HIST1H2BCP62807 126 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 IL15RAQ13261 267 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 HIST2H2BEQ16778 126 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.18□□□□□ -0.3
SCARF1-203ENST00000434376 TMEM211Q6ICI0 200 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 LCN15Q6UWW0 184 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 HIST1H2BHQ93079 126 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 HIST1H2BNQ99877 126 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 HIST1H2BMQ99879 126 aa13.18□□□□□ -0.3
SCARF1-203ENST00000434376 IGSF23A1L1A6 192 aa13.17□□□□□ -0.3
SCARF1-203ENST00000434376 PMELP40967 661 aa13.17□□□□□ -0.3
SCARF1-203ENST00000434376 GLIPR1P48060 266 aa13.17□□□□□ -0.3
SCARF1-203ENST00000434376 COLCA1Q6ZS62 124 aa13.17□□□□□ -0.3
SCARF1-203ENST00000434376 OR2C3Q8N628 320 aa13.17□□□□□ -0.3
SCARF1-203ENST00000434376 MRPL30Q8TCC3 161 aaKnown RBP13.17□□□□□ -0.3
SCARF1-203ENST00000434376 C14orf144Q96I85 54 aa13.17□□□□□ -0.3
SCARF1-203ENST00000434376 NUDT16L1Q9BRJ7 211 aaKnown RBP13.17□□□□□ -0.3
SCARF1-203ENST00000434376 TMEM50AO95807 157 aa13.17□□□□□ -0.3
SCARF1-203ENST00000434376 EWSR1Q01844 656 aaKnown RBP eCLIP13.17□□□□□ -0.3
SCARF1-203ENST00000434376 PRB3Q04118 309 aaPredicted RBP13.17□□□□□ -0.3
SCARF1-203ENST00000434376 HINT2Q9BX68 163 aa13.17□□□□□ -0.3
SCARF1-203ENST00000434376 OR5H1A6NKK0 313 aa13.16□□□□□ -0.3
SCARF1-203ENST00000434376 CECR9P0C854 216 aa13.16□□□□□ -0.3
SCARF1-203ENST00000434376 THNSL2Q86YJ6 484 aa13.16□□□□□ -0.3
SCARF1-203ENST00000434376 RSG1Q9BU20 258 aa13.16□□□□□ -0.3
SCARF1-203ENST00000434376 ANAPC10Q9UM13 185 aa13.16□□□□□ -0.3
SCARF1-203ENST00000434376 PGLYRP1O75594 196 aaPredicted RBP13.16□□□□□ -0.3
SCARF1-203ENST00000434376 G0S2P27469 103 aa13.16□□□□□ -0.3
SCARF1-203ENST00000434376 SPRNQ5BIV9 151 aa13.16□□□□□ -0.3
SCARF1-203ENST00000434376 FIP1L1Q6UN15 594 aaKnown RBP13.16□□□□□ -0.3
SCARF1-203ENST00000434376 Q6ZRM9 215 aa13.16□□□□□ -0.3
SCARF1-203ENST00000434376 OR2D2Q9H210 308 aa13.16□□□□□ -0.3
SCARF1-203ENST00000434376 SMCO3A2RU48 225 aa13.16□□□□□ -0.3
SCARF1-203ENST00000434376 ST8SIA5O15466 376 aa13.16□□□□□ -0.3
SCARF1-203ENST00000434376 PGA5P0DJD9 388 aa13.16□□□□□ -0.3
SCARF1-203ENST00000434376 KIR2DL2P43627 348 aaPredicted RBP13.16□□□□□ -0.3
SCARF1-203ENST00000434376 GPR157Q5UAW9 335 aa13.16□□□□□ -0.3
SCARF1-203ENST00000434376 VKORC1L1Q8N0U8 176 aa13.16□□□□□ -0.3
SCARF1-203ENST00000434376 SPSB4Q96A44 273 aa13.16□□□□□ -0.3
SCARF1-203ENST00000434376 MUCL1Q96DR8 90 aa13.16□□□□□ -0.3
SCARF1-203ENST00000434376 TMEM222Q9H0R3 208 aa13.16□□□□□ -0.3
SCARF1-203ENST00000434376 TNRC6BQ9UPQ9 1833 aaKnown RBP13.16□□□□□ -0.3
SCARF1-203ENST00000434376 KIR2DS1A0A191URI9 304 aa13.15□□□□□ -0.3
SCARF1-203ENST00000434376 TRGC1P0CF51 173 aa13.15□□□□□ -0.3
SCARF1-203ENST00000434376 KIR2DS4P43632 304 aa13.15□□□□□ -0.3
SCARF1-203ENST00000434376 KIR2DS1Q14954 304 aa13.15□□□□□ -0.3
SCARF1-203ENST00000434376 MPV17LQ2QL34 196 aa13.15□□□□□ -0.3
SCARF1-203ENST00000434376 ZNRF1Q8ND25 227 aa13.15□□□□□ -0.3
SCARF1-203ENST00000434376 LINC00470Q9BZP3 86 aa13.15□□□□□ -0.3
SCARF1-203ENST00000434376 ZNF391Q9UJN7 358 aa13.15□□□□□ -0.3
SCARF1-203ENST00000434376 GAB2Q9UQC2 676 aa13.15□□□□□ -0.3
SCARF1-203ENST00000434376 ATP23Q9Y6H3 246 aa13.15□□□□□ -0.3
SCARF1-203ENST00000434376 G6PCP35575 357 aa13.15□□□□□ -0.3
SCARF1-203ENST00000434376 SELENOHQ8IZQ5 122 aaKnown RBP13.15□□□□□ -0.3
SCARF1-203ENST00000434376 FRZBQ92765 325 aa13.15□□□□□ -0.3
SCARF1-203ENST00000434376 LURAP1Q96LR2 239 aa13.15□□□□□ -0.3
SCARF1-203ENST00000434376 OPA3Q9H6K4 179 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms