RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 FAM180AQ6UWF9 173 aa11.64□□□□□ -0.55
HOXC4-202ENST00000430889 TMEM182Q6ZP80 229 aaPredicted RBP11.64□□□□□ -0.55
HOXC4-202ENST00000430889 HAPLN4Q86UW8 402 aa11.64□□□□□ -0.55
HOXC4-202ENST00000430889 FGFRL1Q8N441 504 aa11.64□□□□□ -0.55
HOXC4-202ENST00000430889 Q8NA96 180 aa11.64□□□□□ -0.55
HOXC4-202ENST00000430889 FAM222BQ8WU58 562 aa11.64□□□□□ -0.55
HOXC4-202ENST00000430889 MUCL1Q96DR8 90 aa11.64□□□□□ -0.55
HOXC4-202ENST00000430889 FAM122AQ96E09 287 aa11.64□□□□□ -0.55
HOXC4-202ENST00000430889 OR2V2Q96R30 315 aa11.64□□□□□ -0.55
HOXC4-202ENST00000430889 AGMATQ9BSE5 352 aa11.64□□□□□ -0.55
HOXC4-202ENST00000430889 TANC2Q9HCD6 1990 aa11.64□□□□□ -0.55
HOXC4-202ENST00000430889 ATP6V1G2-DDX39BF2Z307 99 aa11.63□□□□□ -0.55
HOXC4-202ENST00000430889 RAMP3O60896 148 aa11.63□□□□□ -0.55
HOXC4-202ENST00000430889 RPL23AP62750 156 aaKnown RBP11.63□□□□□ -0.55
HOXC4-202ENST00000430889 SPSB3Q6PJ21 355 aa11.63□□□□□ -0.55
HOXC4-202ENST00000430889 TCTEX1D1Q8N7M0 179 aa11.63□□□□□ -0.55
HOXC4-202ENST00000430889 TPRX1Q8N7U7 411 aa11.63□□□□□ -0.55
HOXC4-202ENST00000430889 OR2G3Q8NGZ4 309 aa11.63□□□□□ -0.55
HOXC4-202ENST00000430889 FAM216AQ8WUB2 273 aa11.63□□□□□ -0.55
HOXC4-202ENST00000430889 SNX22Q96L94 193 aa11.63□□□□□ -0.55
HOXC4-202ENST00000430889 DCTN5Q9BTE1 182 aa11.63□□□□□ -0.55
HOXC4-202ENST00000430889 NCOR1P1Q9H4R4 102 aa11.63□□□□□ -0.55
HOXC4-202ENST00000430889 DUSP13Q9UII6 198 aa11.63□□□□□ -0.55
HOXC4-202ENST00000430889 RNF150Q9ULK6 438 aa11.63□□□□□ -0.55
HOXC4-202ENST00000430889 TOR1AO14656 332 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 SNAPINO95295 136 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 ADH4P08319 380 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 CGB3P0DN86 165 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 CGB7P0DN87 165 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 NHLH1Q02575 133 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 ZNF616Q08AN1 781 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 FAM27E3Q08E93 113 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 ARL16Q0P5N6 197 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 GUK1Q16774 197 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 DOLPP1Q86YN1 238 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 CLRN3Q8NCR9 226 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 RNASE11Q8TAA1 199 aaKnown RBP11.62□□□□□ -0.55
HOXC4-202ENST00000430889 GNPNAT1Q96EK6 184 aaPredicted RBP11.62□□□□□ -0.55
HOXC4-202ENST00000430889 ABHD17AQ96GS6 310 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 ABHD14AQ9BUJ0 271 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 MRPL37Q9BZE1 423 aaKnown RBP11.62□□□□□ -0.55
HOXC4-202ENST00000430889 RAI1Q7Z5J4 1906 aaPredicted RBP11.62□□□□□ -0.55
HOXC4-202ENST00000430889 ODAMA1E959 279 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 C17orf98A8MV24 154 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 MGST3O14880 152 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 PPIHO43447 177 aaKnown RBP11.62□□□□□ -0.55
HOXC4-202ENST00000430889 DFFBO76075 338 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 ZNF16P17020 682 aaPredicted RBP11.62□□□□□ -0.55
HOXC4-202ENST00000430889 RPS23P62266 143 aaKnown RBP11.62□□□□□ -0.55
HOXC4-202ENST00000430889 TMEM267Q0VDI3 215 aaPredicted RBP11.62□□□□□ -0.55
HOXC4-202ENST00000430889 ZNF66Q6ZN08 573 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 MRGPRGQ86SM5 289 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 MOGAT3Q86VF5 341 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 STX12Q86Y82 276 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 TMEM217Q8N7C4 229 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 LFNGQ8NES3 379 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 FAM213BQ8TBF2 198 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 ITLN1Q8WWA0 313 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 ESRP2Q9H6T0 727 aaKnown RBP11.62□□□□□ -0.55
HOXC4-202ENST00000430889 KCNJ16Q9NPI9 418 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 HSPB7Q9UBY9 170 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 TP53TG5Q9Y2B4 290 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 ZNF835Q9Y2P0 537 aa11.62□□□□□ -0.55
HOXC4-202ENST00000430889 DIDO1Q9BTC0 2240 aaKnown RBP11.61□□□□□ -0.55
HOXC4-202ENST00000430889 A0A0G2JNJ9 132 aa11.61□□□□□ -0.55
HOXC4-202ENST00000430889 H3BP45 60 aa11.61□□□□□ -0.55
HOXC4-202ENST00000430889 F2RL2O00254 374 aa11.61□□□□□ -0.55
HOXC4-202ENST00000430889 PROP1O75360 226 aa11.61□□□□□ -0.55
HOXC4-202ENST00000430889 PRH1P02810 166 aa11.61□□□□□ -0.55
HOXC4-202ENST00000430889 CD40P25942 277 aa11.61□□□□□ -0.55
HOXC4-202ENST00000430889 RUNX1Q01196 453 aa11.61□□□□□ -0.55
HOXC4-202ENST00000430889 CATR1Q13166 79 aa11.61□□□□□ -0.55
HOXC4-202ENST00000430889 ZNF808Q8N4W9 903 aaPredicted RBP11.61□□□□□ -0.55
HOXC4-202ENST00000430889 ZNF525Q8N782 197 aa11.61□□□□□ -0.55
HOXC4-202ENST00000430889 NUP37Q8NFH4 326 aa11.61□□□□□ -0.55
HOXC4-202ENST00000430889 NINJ1Q92982 152 aa11.61□□□□□ -0.55
HOXC4-202ENST00000430889 PARD6GQ9BYG4 376 aaPredicted RBP11.61□□□□□ -0.55
HOXC4-202ENST00000430889 JKAMPQ9P055 326 aa11.61□□□□□ -0.55
HOXC4-202ENST00000430889 Q9UFV3 132 aa11.61□□□□□ -0.55
HOXC4-202ENST00000430889 KPTNQ9Y664 436 aa11.61□□□□□ -0.55
HOXC4-202ENST00000430889 ZGRF1Q86YA3 2104 aa11.61□□□□□ -0.55
HOXC4-202ENST00000430889 LAMA5O15230 3695 aa11.6□□□□□ -0.55
HOXC4-202ENST00000430889 IGHV3OR15-7A0A075B7D8 119 aa11.6□□□□□ -0.55
HOXC4-202ENST00000430889 IGHV3-43A0A0B4J1X8 118 aa11.6□□□□□ -0.55
HOXC4-202ENST00000430889 LINC00473A8K010 186 aa11.6□□□□□ -0.55
HOXC4-202ENST00000430889 SPINT2O43291 252 aa11.6□□□□□ -0.55
HOXC4-202ENST00000430889 S1PR2O95136 353 aa11.6□□□□□ -0.55
HOXC4-202ENST00000430889 IGHV3-43DP0DP04 118 aa11.6□□□□□ -0.55
HOXC4-202ENST00000430889 IAPPP10997 89 aa11.6□□□□□ -0.55
HOXC4-202ENST00000430889 ATF4P18848 351 aaPredicted RBP11.6□□□□□ -0.55
HOXC4-202ENST00000430889 GZMHP20718 246 aa11.6□□□□□ -0.55
HOXC4-202ENST00000430889 LOXL3P58215 753 aa11.6□□□□□ -0.55
HOXC4-202ENST00000430889 TNFRSF9Q07011 255 aa11.6□□□□□ -0.55
HOXC4-202ENST00000430889 PEA15Q15121 130 aa11.6□□□□□ -0.55
HOXC4-202ENST00000430889 TMEM14EPQ6UXP3 125 aa11.6□□□□□ -0.55
HOXC4-202ENST00000430889 DPPA3Q6W0C5 159 aa11.6□□□□□ -0.55
HOXC4-202ENST00000430889 KDF1Q8NAX2 398 aaPredicted RBP11.6□□□□□ -0.55
HOXC4-202ENST00000430889 Q8TCH9 128 aa11.6□□□□□ -0.55
HOXC4-202ENST00000430889 PSENENQ9NZ42 101 aa11.6□□□□□ -0.55
HOXC4-202ENST00000430889 JPT1Q9UK76 154 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms