RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 MC5RP33032 325 aa11.54□□□□□ -0.56
MSH5-208ENST00000429846 CHRNA7P36544 502 aa11.54□□□□□ -0.56
MSH5-208ENST00000429846 NDPQ00604 133 aa11.54□□□□□ -0.56
MSH5-208ENST00000429846 TMEM267Q0VDI3 215 aaPredicted RBP11.54□□□□□ -0.56
MSH5-208ENST00000429846 RBM48Q5RL73 367 aaKnown RBP11.54□□□□□ -0.56
MSH5-208ENST00000429846 C1orf100Q5SVJ3 147 aa11.54□□□□□ -0.56
MSH5-208ENST00000429846 FAM131AQ6UXB0 335 aa11.54□□□□□ -0.56
MSH5-208ENST00000429846 C6orf201Q7Z4U5 140 aa11.54□□□□□ -0.56
MSH5-208ENST00000429846 FBLIM1Q8WUP2 373 aa11.54□□□□□ -0.56
MSH5-208ENST00000429846 DCUN1D4Q92564 292 aa11.54□□□□□ -0.56
MSH5-208ENST00000429846 ASCL2Q99929 193 aa11.54□□□□□ -0.56
MSH5-208ENST00000429846 RNF5Q99942 180 aa11.54□□□□□ -0.56
MSH5-208ENST00000429846 TM2D1Q9BX74 207 aa11.54□□□□□ -0.56
MSH5-208ENST00000429846 RIMS4Q9H426 269 aaPredicted RBP11.54□□□□□ -0.56
MSH5-208ENST00000429846 SLC23A1Q9UHI7 598 aa11.54□□□□□ -0.56
MSH5-208ENST00000429846 MGAT4AQ9UM21 535 aa11.54□□□□□ -0.56
MSH5-208ENST00000429846 FOXA2Q9Y261 457 aaPredicted RBP11.54□□□□□ -0.56
MSH5-208ENST00000429846 RYR3Q15413 4870 aa11.54□□□□□ -0.56
MSH5-208ENST00000429846 LINC01619G3V211 115 aa11.53□□□□□ -0.56
MSH5-208ENST00000429846 ST8SIA5O15466 376 aa11.53□□□□□ -0.56
MSH5-208ENST00000429846 SAP30O75446 220 aa11.53□□□□□ -0.56
MSH5-208ENST00000429846 CX3CL1P78423 397 aa11.53□□□□□ -0.56
MSH5-208ENST00000429846 GABPB1Q06547 395 aaPredicted RBP11.53□□□□□ -0.56
MSH5-208ENST00000429846 PLGLAQ15195 96 aa11.53□□□□□ -0.56
MSH5-208ENST00000429846 ACSM3Q53FZ2 586 aa11.53□□□□□ -0.56
MSH5-208ENST00000429846 LAIR2Q6ISS4 152 aa11.53□□□□□ -0.56
MSH5-208ENST00000429846 ZNF880Q6PDB4 577 aa11.53□□□□□ -0.56
MSH5-208ENST00000429846 CD200R1LQ6Q8B3 271 aa11.53□□□□□ -0.56
MSH5-208ENST00000429846 C5orf24Q7Z6I8 188 aa11.53□□□□□ -0.56
MSH5-208ENST00000429846 EDARADDQ8WWZ3 215 aa11.53□□□□□ -0.56
MSH5-208ENST00000429846 CYYR1Q96J86 154 aa11.53□□□□□ -0.56
MSH5-208ENST00000429846 FAAP24Q9BTP7 215 aa11.53□□□□□ -0.56
MSH5-208ENST00000429846 MND1Q9BWT6 205 aa11.53□□□□□ -0.56
MSH5-208ENST00000429846 TOLLIPQ9H0E2 274 aa11.53□□□□□ -0.56
MSH5-208ENST00000429846 FBXL15Q9H469 300 aa11.53□□□□□ -0.56
MSH5-208ENST00000429846 CHMP1AQ9HD42 196 aaPredicted RBP11.53□□□□□ -0.56
MSH5-208ENST00000429846 FKBP14Q9NWM8 211 aa11.53□□□□□ -0.56
MSH5-208ENST00000429846 WASHC3Q9Y3C0 194 aa11.53□□□□□ -0.56
MSH5-208ENST00000429846 FBXO7Q9Y3I1 522 aa11.53□□□□□ -0.56
MSH5-208ENST00000429846 TRBV6-6A0A0A6YYG2 114 aa11.52□□□□□ -0.57
MSH5-208ENST00000429846 H0YJW9 148 aa11.52□□□□□ -0.57
MSH5-208ENST00000429846 ARPC1BO15143 372 aaKnown RBP11.52□□□□□ -0.57
MSH5-208ENST00000429846 SOX15O60248 233 aa11.52□□□□□ -0.57
MSH5-208ENST00000429846 BPNT1O95861 308 aa11.52□□□□□ -0.57
MSH5-208ENST00000429846 GSTP1P09211 210 aaKnown RBP11.52□□□□□ -0.57
MSH5-208ENST00000429846 GNAO1P09471 354 aa11.52□□□□□ -0.57
MSH5-208ENST00000429846 OR8U9P0C7N5 309 aa11.52□□□□□ -0.57
MSH5-208ENST00000429846 CT45A6P0DMU7 189 aa11.52□□□□□ -0.57
MSH5-208ENST00000429846 CT45A5P0DMU8 189 aa11.52□□□□□ -0.57
MSH5-208ENST00000429846 CT45A7P0DMV0 189 aa11.52□□□□□ -0.57
MSH5-208ENST00000429846 HTR2CP28335 458 aa11.52□□□□□ -0.57
MSH5-208ENST00000429846 UNC119Q13432 240 aa11.52□□□□□ -0.57
MSH5-208ENST00000429846 RNLSQ5VYX0 342 aa11.52□□□□□ -0.57
MSH5-208ENST00000429846 OR10K2Q6IF99 312 aa11.52□□□□□ -0.57
MSH5-208ENST00000429846 LRRTM1Q86UE6 522 aa11.52□□□□□ -0.57
MSH5-208ENST00000429846 BPIFB6Q8NFQ5 453 aa11.52□□□□□ -0.57
MSH5-208ENST00000429846 OR5AN1Q8NGI8 311 aa11.52□□□□□ -0.57
MSH5-208ENST00000429846 OR6Q1Q8NGQ2 317 aa11.52□□□□□ -0.57
MSH5-208ENST00000429846 DLX4Q92988 240 aaPredicted RBP11.52□□□□□ -0.57
MSH5-208ENST00000429846 AGMATQ9BSE5 352 aa11.52□□□□□ -0.57
MSH5-208ENST00000429846 NICN1Q9BSH3 213 aa11.52□□□□□ -0.57
MSH5-208ENST00000429846 SLA2Q9H6Q3 261 aa11.52□□□□□ -0.57
MSH5-208ENST00000429846 PLEKHJ1Q9NW61 149 aa11.52□□□□□ -0.57
MSH5-208ENST00000429846 TMEM14DPA8MWL7 114 aa11.51□□□□□ -0.57
MSH5-208ENST00000429846 SLC22A1O15245 554 aa11.51□□□□□ -0.57
MSH5-208ENST00000429846 ZBTB25P24278 435 aa11.51□□□□□ -0.57
MSH5-208ENST00000429846 CD40LGP29965 261 aa11.51□□□□□ -0.57
MSH5-208ENST00000429846 SLURP1P55000 103 aa11.51□□□□□ -0.57
MSH5-208ENST00000429846 INSL4Q14641 139 aa11.51□□□□□ -0.57
MSH5-208ENST00000429846 AKIRIN2Q53H80 203 aa11.51□□□□□ -0.57
MSH5-208ENST00000429846 ACTBL2Q562R1 376 aa11.51□□□□□ -0.57
MSH5-208ENST00000429846 RPL39P5Q59GN2 51 aa11.51□□□□□ -0.57
MSH5-208ENST00000429846 ACSM6Q6P461 480 aa11.51□□□□□ -0.57
MSH5-208ENST00000429846 OR6M1Q8NGM8 313 aa11.51□□□□□ -0.57
MSH5-208ENST00000429846 ABHD5Q8WTS1 349 aa11.51□□□□□ -0.57
MSH5-208ENST00000429846 FLYWCH2Q96CP2 140 aaKnown RBP11.51□□□□□ -0.57
MSH5-208ENST00000429846 ALX4Q9H161 411 aaPredicted RBP11.51□□□□□ -0.57
MSH5-208ENST00000429846 TPSG1Q9NRR2 321 aa11.51□□□□□ -0.57
MSH5-208ENST00000429846 NUBP2Q9Y5Y2 271 aa11.51□□□□□ -0.57
MSH5-208ENST00000429846 H7C2Y5 167 aa11.5□□□□□ -0.57
MSH5-208ENST00000429846 SPDEFO95238 335 aa11.5□□□□□ -0.57
MSH5-208ENST00000429846 TFAP2AP05549 437 aa11.5□□□□□ -0.57
MSH5-208ENST00000429846 CD37P11049 281 aa11.5□□□□□ -0.57
MSH5-208ENST00000429846 GP9P14770 177 aa11.5□□□□□ -0.57
MSH5-208ENST00000429846 SPNP16150 400 aa11.5□□□□□ -0.57
MSH5-208ENST00000429846 SRMP19623 302 aa11.5□□□□□ -0.57
MSH5-208ENST00000429846 HLA-DRB3P79483 266 aa11.5□□□□□ -0.57
MSH5-208ENST00000429846 QRFPP83859 136 aa11.5□□□□□ -0.57
MSH5-208ENST00000429846 RCN1Q15293 331 aa11.5□□□□□ -0.57
MSH5-208ENST00000429846 HSD17B12Q53GQ0 312 aa11.5□□□□□ -0.57
MSH5-208ENST00000429846 ZNF562Q6V9R5 426 aa11.5□□□□□ -0.57
MSH5-208ENST00000429846 GLDNQ6ZMI3 551 aaPredicted RBP11.5□□□□□ -0.57
MSH5-208ENST00000429846 MUC7Q8TAX7 377 aa11.5□□□□□ -0.57
MSH5-208ENST00000429846 SETD6Q8TBK2 473 aa11.5□□□□□ -0.57
MSH5-208ENST00000429846 RCHY1Q96PM5 261 aa11.5□□□□□ -0.57
MSH5-208ENST00000429846 URM1Q9BTM9 101 aaKnown RBP11.5□□□□□ -0.57
MSH5-208ENST00000429846 TMED9Q9BVK6 235 aa11.5□□□□□ -0.57
MSH5-208ENST00000429846 VCXQ9H320 206 aa11.5□□□□□ -0.57
MSH5-208ENST00000429846 A3GALT2U3KPV4 340 aa11.5□□□□□ -0.57
MSH5-208ENST00000429846 IGHV4OR15-8A0A075B7B6 117 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms