RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 WFDC8Q8IUA0 241 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 OR5A2Q8NGI9 324 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 IFT22Q9H7X7 185 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 AURKAIP1Q9NWT8 199 aaPredicted RBP7.05□□□□□ -1.28
CD44-208ENST00000428726 PSG11Q9UQ72 335 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 GALR2O43603 387 aaPredicted RBP7.05□□□□□ -1.28
CD44-208ENST00000428726 IL2RGP31785 369 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 RPL30P62888 115 aaKnown RBP7.05□□□□□ -1.28
CD44-208ENST00000428726 TGFBR3Q03167 851 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 MPV17LQ2QL34 196 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 GFI1BQ5VTD9 330 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 ZNF573Q86YE8 665 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 THNSL2Q86YJ6 484 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 LGI3Q8N145 548 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 DMBX1Q8NFW5 382 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 OR2G3Q8NGZ4 309 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 LRRC29Q8WV35 223 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 OR51I2Q9H344 312 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 PLEKHA2Q9HB19 425 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 CLN8Q9UBY8 286 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 CACFD1Q9UGQ2 172 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 HRNRQ86YZ3 2850 aaPredicted RBP7.05□□□□□ -1.28
CD44-208ENST00000428726 ITPR1Q14643 2758 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 TRDCB7Z8K6 153 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 CYB5R3P00387 301 aaPredicted RBP7.04□□□□□ -1.28
CD44-208ENST00000428726 GNG10P50151 68 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 NDUFA6P56556 154 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 EWSR1Q01844 656 aaKnown RBP eCLIP7.04□□□□□ -1.28
CD44-208ENST00000428726 SELENOHQ8IZQ5 122 aaKnown RBP7.04□□□□□ -1.28
CD44-208ENST00000428726 NANOS1Q8WY41 292 aaKnown RBP7.04□□□□□ -1.28
CD44-208ENST00000428726 GPR146Q96CH1 333 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 SAT2Q96F10 170 aaPredicted RBP7.04□□□□□ -1.28
CD44-208ENST00000428726 ABHD17AQ96GS6 310 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 C18orf12Q96KH6 178 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 TMEM204Q9BSN7 226 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 SMCO4Q9NRQ5 59 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 DKK4Q9UBT3 224 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 E5RGE8 158 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 JTBO76095 146 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 HAND1O96004 215 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 IGHV3-48P01763 117 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 GAPDHP04406 335 aaKnown RBP7.04□□□□□ -1.28
CD44-208ENST00000428726 COL10A1Q03692 680 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 Q3ZCU0 254 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 ASCL5Q7RTU5 278 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 FAM185AQ8N0U4 392 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 WDR31Q8NA23 367 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 PRSS33Q8NF86 280 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 OR13A1Q8NGR1 328 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 NEUROG1Q92886 237 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 RHOVQ96L33 236 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 PLK3Q9H4B4 646 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 ZDHHC11Q9H8X9 412 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 KCNJ16Q9NPI9 418 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 GSN-AS1Q9NRJ2 163 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 HIVEP3Q5T1R4 2406 aa7.04□□□□□ -1.28
CD44-208ENST00000428726 ZFP92A6NM28 416 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 LYNX1G3V0Z9 82 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 LYNX1P0DP58 116 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 GCH1P30793 250 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 SULT1A1P50225 295 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 SRPXP78539 464 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 ARL16Q0P5N6 197 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 KIAA0141Q14154 515 aaPredicted RBP7.03□□□□□ -1.28
CD44-208ENST00000428726 ZNF474Q6S9Z5 364 aaPredicted RBP7.03□□□□□ -1.28
CD44-208ENST00000428726 IL34Q6ZMJ4 242 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 CMTM1Q8IZ96 169 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 STARD4Q96DR4 205 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 GP6Q9HCN6 339 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 TMED3Q9Y3Q3 217 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 MPC1Q9Y5U8 109 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 WSB1Q9Y6I7 421 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 NAV3Q8IVL0 2385 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 IGHV1-18A0A0C4DH31 117 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 KIR2DS1A0A191URI9 304 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 OR5B21A6NL26 309 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 LY6HO94772 140 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 NAPSAO96009 420 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 IGKV1-39P01597 117 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 IGKV1D-39P04432 117 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 HEXAP06865 529 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 ATP6V0CP27449 155 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 KIR2DS4P43632 304 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 REG1BP48304 166 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 KIR2DS1Q14954 304 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 RPL39P5Q59GN2 51 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 BTNL8Q6UX41 500 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 LINC00596Q86U02 117 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 OR2C3Q8N628 320 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 TCTEX1D2Q8WW35 142 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 SDSLQ96GA7 329 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 SMIM8Q96KF7 97 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 RTL8AQ9BWD3 113 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 TMEM222Q9H0R3 208 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 RIMS4Q9H426 269 aaPredicted RBP7.03□□□□□ -1.28
CD44-208ENST00000428726 CARHSP1Q9Y2V2 147 aaKnown RBP7.03□□□□□ -1.28
CD44-208ENST00000428726 TLN2Q9Y4G6 2542 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 DSCAMO60469 2012 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 TRAV17A0A0B4J275 112 aa7.03□□□□□ -1.28
CD44-208ENST00000428726 C17orf98A8MV24 154 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms