RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 RTN4IP1Q8WWV3 396 aaPredicted RBP11.72□□□□□ -0.53
SGCE-204ENST00000428696 S1PR3Q99500 378 aa11.72□□□□□ -0.53
SGCE-204ENST00000428696 MDFIQ99750 246 aa11.72□□□□□ -0.53
SGCE-204ENST00000428696 PITPNC1Q9UKF7 332 aa11.72□□□□□ -0.53
SGCE-204ENST00000428696 TRBV6-7A0A0A0MS04 114 aa11.71□□□□□ -0.53
SGCE-204ENST00000428696 IGHV1-3A0A0C4DH29 117 aa11.71□□□□□ -0.53
SGCE-204ENST00000428696 VGLL3A8MV65 326 aa11.71□□□□□ -0.53
SGCE-204ENST00000428696 ZNF701M0R085 212 aaPredicted RBP11.71□□□□□ -0.53
SGCE-204ENST00000428696 RAB29O14966 203 aa11.71□□□□□ -0.53
SGCE-204ENST00000428696 PMP2P02689 132 aa11.71□□□□□ -0.53
SGCE-204ENST00000428696 S100A5P33763 92 aa11.71□□□□□ -0.53
SGCE-204ENST00000428696 IL18Q14116 193 aa11.71□□□□□ -0.53
SGCE-204ENST00000428696 AANATQ16613 207 aa11.71□□□□□ -0.53
SGCE-204ENST00000428696 RPL39P5Q59GN2 51 aa11.71□□□□□ -0.53
SGCE-204ENST00000428696 OR8H3Q8N146 312 aa11.71□□□□□ -0.53
SGCE-204ENST00000428696 FBN1P35555 2871 aaKnown RBP11.71□□□□□ -0.53
SGCE-204ENST00000428696 SAA2-SAA4A0A096LPE2 208 aa11.7□□□□□ -0.54
SGCE-204ENST00000428696 SNRNP70P08621 437 aaKnown RBP11.7□□□□□ -0.54
SGCE-204ENST00000428696 SAA2P0DJI9 122 aaPredicted RBP11.7□□□□□ -0.54
SGCE-204ENST00000428696 HLA-DMAP28067 261 aa11.7□□□□□ -0.54
SGCE-204ENST00000428696 TNFSF8P32971 234 aa11.7□□□□□ -0.54
SGCE-204ENST00000428696 ARSJQ5FYB0 599 aaPredicted RBP11.7□□□□□ -0.54
SGCE-204ENST00000428696 Q6ZS49 121 aa11.7□□□□□ -0.54
SGCE-204ENST00000428696 DRAXINQ8NBI3 349 aaPredicted RBP11.7□□□□□ -0.54
SGCE-204ENST00000428696 ZFAND2BQ8WV99 257 aa11.7□□□□□ -0.54
SGCE-204ENST00000428696 FCAMRQ8WWV6 532 aa11.7□□□□□ -0.54
SGCE-204ENST00000428696 RBMXL1Q96E39 390 aaKnown RBP11.7□□□□□ -0.54
SGCE-204ENST00000428696 ABHD1Q96SE0 405 aa11.7□□□□□ -0.54
SGCE-204ENST00000428696 CABLES2Q9BTV7 478 aa11.7□□□□□ -0.54
SGCE-204ENST00000428696 NECAP2Q9NVZ3 263 aa11.7□□□□□ -0.54
SGCE-204ENST00000428696 PLA2G2EQ9NZK7 142 aa11.7□□□□□ -0.54
SGCE-204ENST00000428696 PIPOXQ9P0Z9 390 aa11.7□□□□□ -0.54
SGCE-204ENST00000428696 TCF19Q9Y242 345 aa11.7□□□□□ -0.54
SGCE-204ENST00000428696 A0A1W2PPI3 338 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 FABP12A6NFH5 140 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 ZNF736B4DX44 427 aaPredicted RBP11.69□□□□□ -0.54
SGCE-204ENST00000428696 IGKV1D-33P01593 117 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 IGKV1-33P01594 117 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 TMEM11P17152 192 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 FCGR2CP31995 323 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 ZNF816Q0VGE8 651 aaPredicted RBP11.69□□□□□ -0.54
SGCE-204ENST00000428696 LY6G6FQ5SQ64 297 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 FAM131AQ6UXB0 335 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 CCBE1Q6UXH8 406 aaPredicted RBP11.69□□□□□ -0.54
SGCE-204ENST00000428696 OR5H2Q8NGV7 314 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 C15orf40Q8WUR7 153 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 ST6GALNAC6Q969X2 333 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 MRPL20Q9BYC9 149 aaKnown RBP11.69□□□□□ -0.54
SGCE-204ENST00000428696 OR2D2Q9H210 308 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 IFI27L2Q9H2X8 130 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 RAB18Q9NP72 206 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 A6NDX4 124 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 M0R1X1 148 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 LANCL1O43813 399 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 RBBP9O75884 186 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 OR5H8P0DN80 308 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 RFX2P48378 723 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 DYNLT3P51808 116 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 LUMP51884 338 aaPredicted RBP11.69□□□□□ -0.54
SGCE-204ENST00000428696 CDK10Q15131 360 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 GLDNQ6ZMI3 551 aaPredicted RBP11.69□□□□□ -0.54
SGCE-204ENST00000428696 ODF3L1Q8IXM7 274 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 H1FOOQ8IZA3 346 aaPredicted RBP11.69□□□□□ -0.54
SGCE-204ENST00000428696 OR5AP2Q8NGF4 316 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 OR52I2Q8NH67 350 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 SNAPC3Q92966 411 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 MMP27Q9H306 513 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 SCPEP1Q9HB40 452 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 EHFQ9NZC4 300 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 C1RLQ9NZP8 487 aa11.69□□□□□ -0.54
SGCE-204ENST00000428696 NCBP2LA6PVI3 153 aaKnown RBP11.68□□□□□ -0.54
SGCE-204ENST00000428696 H7C2Y5 167 aa11.68□□□□□ -0.54
SGCE-204ENST00000428696 TXNL1O43396 289 aa11.68□□□□□ -0.54
SGCE-204ENST00000428696 CHST1O43916 411 aa11.68□□□□□ -0.54
SGCE-204ENST00000428696 DIRAS3O95661 229 aa11.68□□□□□ -0.54
SGCE-204ENST00000428696 FXYD4P59646 89 aa11.68□□□□□ -0.54
SGCE-204ENST00000428696 TSPAN5P62079 268 aa11.68□□□□□ -0.54
SGCE-204ENST00000428696 FOXB2Q5VYV0 432 aa11.68□□□□□ -0.54
SGCE-204ENST00000428696 GPX8Q8TED1 209 aa11.68□□□□□ -0.54
SGCE-204ENST00000428696 AGMATQ9BSE5 352 aa11.68□□□□□ -0.54
SGCE-204ENST00000428696 SLC25A33Q9BSK2 321 aa11.68□□□□□ -0.54
SGCE-204ENST00000428696 KLK11Q9UBX7 282 aa11.68□□□□□ -0.54
SGCE-204ENST00000428696 SULT1C2O00338 296 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 ITGB1BP1O14713 200 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 TUSC2O75896 110 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 HKR1P10072 659 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 AADACP22760 399 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 RCVRNP35243 200 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 HRH1P35367 487 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 ZNF137PP52743 207 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 RAG2P55895 527 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 TAS2R46P59540 309 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 DGCR2P98153 550 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 FBLN7Q53RD9 439 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 PYDC2Q56P42 97 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 C9orf152Q5JTZ5 239 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 PYHIN1Q6K0P9 492 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 ZNF833PQ6ZTB9 187 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 LYSMD2Q8IV50 215 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 OR4C13Q8NGP0 309 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms