RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 CFHR3Q02985 330 aa9.38□□□□□ -0.91
TTC3-208ENST00000428693 UNC119Q13432 240 aa9.38□□□□□ -0.91
TTC3-208ENST00000428693 C5orf64Q2M2E5 130 aa9.38□□□□□ -0.91
TTC3-208ENST00000428693 ZNF833PQ6ZTB9 187 aa9.38□□□□□ -0.91
TTC3-208ENST00000428693 OR6M1Q8NGM8 313 aa9.38□□□□□ -0.91
TTC3-208ENST00000428693 FBLIM1Q8WUP2 373 aa9.38□□□□□ -0.91
TTC3-208ENST00000428693 PHYHIPQ92561 330 aa9.38□□□□□ -0.91
TTC3-208ENST00000428693 ABHD14BQ96IU4 210 aa9.38□□□□□ -0.91
TTC3-208ENST00000428693 ASCL2Q99929 193 aa9.38□□□□□ -0.91
TTC3-208ENST00000428693 HDHD3Q9BSH5 251 aaPredicted RBP9.38□□□□□ -0.91
TTC3-208ENST00000428693 URM1Q9BTM9 101 aaKnown RBP9.38□□□□□ -0.91
TTC3-208ENST00000428693 FKBP14Q9NWM8 211 aa9.38□□□□□ -0.91
TTC3-208ENST00000428693 PIPOXQ9P0Z9 390 aa9.38□□□□□ -0.91
TTC3-208ENST00000428693 AK3Q9UIJ7 227 aa9.38□□□□□ -0.91
TTC3-208ENST00000428693 RNF150Q9ULK6 438 aa9.38□□□□□ -0.91
TTC3-208ENST00000428693 AK6Q9Y3D8 172 aaKnown RBP9.38□□□□□ -0.91
TTC3-208ENST00000428693 CASQ2O14958 399 aaPredicted RBP9.37□□□□□ -0.91
TTC3-208ENST00000428693 SOCS1O15524 211 aa9.37□□□□□ -0.91
TTC3-208ENST00000428693 BPNT1O95861 308 aa9.37□□□□□ -0.91
TTC3-208ENST00000428693 HLA-DRB1P01911 266 aa9.37□□□□□ -0.91
TTC3-208ENST00000428693 OR8U8P0C7N1 319 aa9.37□□□□□ -0.91
TTC3-208ENST00000428693 ARSBP15848 533 aa9.37□□□□□ -0.91
TTC3-208ENST00000428693 RAB9AP51151 201 aa9.37□□□□□ -0.91
TTC3-208ENST00000428693 GNB1P62873 340 aa9.37□□□□□ -0.91
TTC3-208ENST00000428693 ZNF616Q08AN1 781 aa9.37□□□□□ -0.91
TTC3-208ENST00000428693 RAB11BQ15907 218 aa9.37□□□□□ -0.91
TTC3-208ENST00000428693 C1orf100Q5SVJ3 147 aa9.37□□□□□ -0.91
TTC3-208ENST00000428693 SVOPQ8N4V2 548 aa9.37□□□□□ -0.91
TTC3-208ENST00000428693 ZNF491Q8N8L2 437 aa9.37□□□□□ -0.91
TTC3-208ENST00000428693 RNF152Q8N8N0 203 aa9.37□□□□□ -0.91
TTC3-208ENST00000428693 UBE2E2Q96LR5 201 aa9.37□□□□□ -0.91
TTC3-208ENST00000428693 CHCHD6Q9BRQ6 235 aa9.37□□□□□ -0.91
TTC3-208ENST00000428693 PARP12Q9H0J9 701 aaKnown RBP9.37□□□□□ -0.91
TTC3-208ENST00000428693 ALX4Q9H161 411 aaPredicted RBP9.37□□□□□ -0.91
TTC3-208ENST00000428693 IFI27L2Q9H2X8 130 aa9.37□□□□□ -0.91
TTC3-208ENST00000428693 OR1A1Q9P1Q5 309 aa9.37□□□□□ -0.91
TTC3-208ENST00000428693 TPRKBQ9Y3C4 175 aa9.37□□□□□ -0.91
TTC3-208ENST00000428693 DNAH9Q9NYC9 4486 aa9.37□□□□□ -0.91
TTC3-208ENST00000428693 A0A0A6YYD4 124 aa9.36□□□□□ -0.91
TTC3-208ENST00000428693 SLC22A1O15245 554 aa9.36□□□□□ -0.91
TTC3-208ENST00000428693 UCHL1P09936 223 aa9.36□□□□□ -0.91
TTC3-208ENST00000428693 CPEP16870 476 aa9.36□□□□□ -0.91
TTC3-208ENST00000428693 ZBTB25P24278 435 aa9.36□□□□□ -0.91
TTC3-208ENST00000428693 VEGFCP49767 419 aa9.36□□□□□ -0.91
TTC3-208ENST00000428693 CLDN12P56749 244 aa9.36□□□□□ -0.91
TTC3-208ENST00000428693 RPS25P62851 125 aaKnown RBP9.36□□□□□ -0.91
TTC3-208ENST00000428693 MRPS15P82914 257 aaKnown RBP9.36□□□□□ -0.91
TTC3-208ENST00000428693 MOB1BQ7L9L4 216 aa9.36□□□□□ -0.91
TTC3-208ENST00000428693 DRAXINQ8NBI3 349 aaPredicted RBP9.36□□□□□ -0.91
TTC3-208ENST00000428693 WWC2-AS2Q96NR7 200 aa9.36□□□□□ -0.91
TTC3-208ENST00000428693 MS4A10Q96PG2 267 aa9.36□□□□□ -0.91
TTC3-208ENST00000428693 TM2D1Q9BX74 207 aa9.36□□□□□ -0.91
TTC3-208ENST00000428693 RIMS4Q9H426 269 aaPredicted RBP9.36□□□□□ -0.91
TTC3-208ENST00000428693 NKX1-2Q9UD57 310 aaPredicted RBP9.36□□□□□ -0.91
TTC3-208ENST00000428693 ZNF221Q9UK13 617 aa9.36□□□□□ -0.91
TTC3-208ENST00000428693 ZNF256Q9Y2P7 627 aaPredicted RBP9.36□□□□□ -0.91
TTC3-208ENST00000428693 LSM2Q9Y333 95 aaKnown RBP9.36□□□□□ -0.91
TTC3-208ENST00000428693 KMT2CQ8NEZ4 4911 aaKnown RBP9.35□□□□□ -0.91
TTC3-208ENST00000428693 TMEM14DPA8MWL7 114 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 RRHO14718 337 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 RGS10O43665 173 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 SAP30O75446 220 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 ARL6IP5O75915 188 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 NAPSAO96009 420 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 IGHV3-11P01762 117 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 SCTP09683 121 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 CT45A6P0DMU7 189 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 CT45A5P0DMU8 189 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 CT45A7P0DMV0 189 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 CALRP27797 417 aaKnown RBP9.35□□□□□ -0.91
TTC3-208ENST00000428693 CD40LGP29965 261 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 PPIFP30405 207 aaKnown RBP9.35□□□□□ -0.91
TTC3-208ENST00000428693 MC5RP33032 325 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 AQP4P55087 323 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 RPS16P62249 146 aaKnown RBP9.35□□□□□ -0.91
TTC3-208ENST00000428693 CX3CL1P78423 397 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 HLA-DRB3P79483 266 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 TMEM267Q0VDI3 215 aaPredicted RBP9.35□□□□□ -0.91
TTC3-208ENST00000428693 RNLSQ5VYX0 342 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 UNQ5815/PRO19632Q6UWF5 114 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 PPP1R27Q86WC6 154 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 NPBQ8NG41 125 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 EDARADDQ8WWZ3 215 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 DCUN1D4Q92564 292 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 ARHGAP5-AS1Q96IT6 56 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 CMSS1Q9BQ75 279 aaKnown RBP9.35□□□□□ -0.91
TTC3-208ENST00000428693 FAM103A1Q9BTL3 118 aaKnown RBP9.35□□□□□ -0.91
TTC3-208ENST00000428693 C11orf54Q9H0W9 315 aaPredicted RBP9.35□□□□□ -0.91
TTC3-208ENST00000428693 LPAR5Q9H1C0 372 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 ZNF355PQ9NSJ1 428 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 METTL1Q9UBP6 276 aaKnown RBP9.35□□□□□ -0.91
TTC3-208ENST00000428693 SCOCQ9UIL1 159 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 FOXA2Q9Y261 457 aaPredicted RBP9.35□□□□□ -0.91
TTC3-208ENST00000428693 WASHC3Q9Y3C0 194 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 FBXO7Q9Y3I1 522 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 TENM3Q9P273 2699 aa9.35□□□□□ -0.91
TTC3-208ENST00000428693 A0A075B6Q4 140 aa9.34□□□□□ -0.91
TTC3-208ENST00000428693 OR5H14A6NHG9 310 aa9.34□□□□□ -0.91
TTC3-208ENST00000428693 H0YJW9 148 aa9.34□□□□□ -0.91
TTC3-208ENST00000428693 I3L521 148 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms