RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 COX5AP20674 150 aa13.69□□□□□ -0.22
C9orf3-206ENST00000428313 MSR1P21757 451 aa13.69□□□□□ -0.22
C9orf3-206ENST00000428313 MLF1P58340 268 aa13.69□□□□□ -0.22
C9orf3-206ENST00000428313 RHOBP62745 196 aa13.69□□□□□ -0.22
C9orf3-206ENST00000428313 PSG4Q00888 419 aa13.69□□□□□ -0.22
C9orf3-206ENST00000428313 TMEM249Q2WGJ8 235 aa13.69□□□□□ -0.22
C9orf3-206ENST00000428313 STUMQ69YW2 141 aa13.69□□□□□ -0.22
C9orf3-206ENST00000428313 TCF24Q7RTU0 167 aa13.69□□□□□ -0.22
C9orf3-206ENST00000428313 RD3Q7Z3Z2 195 aa13.69□□□□□ -0.22
C9orf3-206ENST00000428313 A0A1W2PS18 150 aa13.68□□□□□ -0.22
C9orf3-206ENST00000428313 J3QR06 171 aa13.68□□□□□ -0.22
C9orf3-206ENST00000428313 RAMP3O60896 148 aa13.68□□□□□ -0.22
C9orf3-206ENST00000428313 ZNF324O75467 553 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-206ENST00000428313 MT-ND6P03923 174 aa13.68□□□□□ -0.22
C9orf3-206ENST00000428313 HNRNPA2B1P22626 353 aaKnown RBP13.68□□□□□ -0.22
C9orf3-206ENST00000428313 F2RP25116 425 aa13.68□□□□□ -0.22
C9orf3-206ENST00000428313 S100GP29377 79 aa13.68□□□□□ -0.22
C9orf3-206ENST00000428313 HLA-DQA1Q5Y7H0 255 aa13.68□□□□□ -0.22
C9orf3-206ENST00000428313 OR4A47Q6IF82 309 aa13.68□□□□□ -0.22
C9orf3-206ENST00000428313 LHFPL2Q6ZUX7 228 aa13.68□□□□□ -0.22
C9orf3-206ENST00000428313 DTX1Q86Y01 620 aa13.68□□□□□ -0.22
C9orf3-206ENST00000428313 OR2M3Q8NG83 312 aa13.68□□□□□ -0.22
C9orf3-206ENST00000428313 NUDT22Q9BRQ3 303 aa13.68□□□□□ -0.22
C9orf3-206ENST00000428313 SFXN3Q9BWM7 321 aa13.68□□□□□ -0.22
C9orf3-206ENST00000428313 DOCK11Q5JSL3 2073 aa13.67□□□□□ -0.22
C9orf3-206ENST00000428313 IGKV1-27A0A075B6S5 117 aa13.67□□□□□ -0.22
C9orf3-206ENST00000428313 TRAV9-2A0A087WT02 112 aa13.67□□□□□ -0.22
C9orf3-206ENST00000428313 IGKV1D-13A0A0B4J2D9 117 aa13.67□□□□□ -0.22
C9orf3-206ENST00000428313 TAX1BP3O14907 124 aa13.67□□□□□ -0.22
C9orf3-206ENST00000428313 PGLYRP1O75594 196 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-206ENST00000428313 NAPSAO96009 420 aa13.67□□□□□ -0.22
C9orf3-206ENST00000428313 LINC00271P0C7V0 271 aa13.67□□□□□ -0.22
C9orf3-206ENST00000428313 IGKV1-13P0DP09 117 aa13.67□□□□□ -0.22
C9orf3-206ENST00000428313 GLB1P16278 677 aa13.67□□□□□ -0.22
C9orf3-206ENST00000428313 LGALS4P56470 323 aa13.67□□□□□ -0.22
C9orf3-206ENST00000428313 PPP1CAP62136 330 aa13.67□□□□□ -0.22
C9orf3-206ENST00000428313 KIAA0895LQ68EN5 471 aa13.67□□□□□ -0.22
C9orf3-206ENST00000428313 ZNF114Q8NC26 417 aa13.67□□□□□ -0.22
C9orf3-206ENST00000428313 ZNF596Q8TC21 504 aa13.67□□□□□ -0.22
C9orf3-206ENST00000428313 ZNF501Q96CX3 271 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-206ENST00000428313 TXNDC17Q9BRA2 123 aa13.67□□□□□ -0.22
C9orf3-206ENST00000428313 ZNF442Q9H7R0 627 aa13.67□□□□□ -0.22
C9orf3-206ENST00000428313 CCL28Q9NRJ3 127 aa13.67□□□□□ -0.22
C9orf3-206ENST00000428313 OTOL1A6NHN0 477 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-206ENST00000428313 AQP7P3A6NL99 342 aa13.67□□□□□ -0.22
C9orf3-206ENST00000428313 CD300LBA8K4G0 201 aa13.67□□□□□ -0.22
C9orf3-206ENST00000428313 C2orf27AQ580R0 203 aa13.67□□□□□ -0.22
C9orf3-206ENST00000428313 WNT10AQ9GZT5 417 aa13.67□□□□□ -0.22
C9orf3-206ENST00000428313 CLEC1BQ9P126 229 aa13.67□□□□□ -0.22
C9orf3-206ENST00000428313 SNURFLB1AK76 121 aa13.66□□□□□ -0.22
C9orf3-206ENST00000428313 NDUFB4O95168 129 aa13.66□□□□□ -0.22
C9orf3-206ENST00000428313 COX19Q49B96 90 aa13.66□□□□□ -0.22
C9orf3-206ENST00000428313 KRTCAP3Q53RY4 240 aa13.66□□□□□ -0.22
C9orf3-206ENST00000428313 FAM71F2Q6NXP2 309 aa13.66□□□□□ -0.22
C9orf3-206ENST00000428313 MMABQ96EY8 250 aaPredicted RBP13.66□□□□□ -0.22
C9orf3-206ENST00000428313 GPHA2Q96T91 129 aa13.66□□□□□ -0.22
C9orf3-206ENST00000428313 CACNG5Q9UF02 275 aa13.66□□□□□ -0.22
C9orf3-206ENST00000428313 F5H5K5 113 aa13.66□□□□□ -0.22
C9orf3-206ENST00000428313 CORTO00230 105 aa13.66□□□□□ -0.22
C9orf3-206ENST00000428313 CA2P00918 260 aa13.66□□□□□ -0.22
C9orf3-206ENST00000428313 SERPINE2P07093 398 aa13.66□□□□□ -0.22
C9orf3-206ENST00000428313 ZNF83P51522 516 aa13.66□□□□□ -0.22
C9orf3-206ENST00000428313 HIST3H3Q16695 136 aa13.66□□□□□ -0.22
C9orf3-206ENST00000428313 SMIM21Q3B7S5 101 aa13.66□□□□□ -0.22
C9orf3-206ENST00000428313 C1orf53Q5VUE5 145 aa13.66□□□□□ -0.22
C9orf3-206ENST00000428313 TMEM14EPQ6UXP3 125 aa13.66□□□□□ -0.22
C9orf3-206ENST00000428313 Q6ZRM9 215 aa13.66□□□□□ -0.22
C9orf3-206ENST00000428313 SH3BGRL2Q9UJC5 107 aa13.66□□□□□ -0.22
C9orf3-206ENST00000428313 RALGAPA1Q6GYQ0 2036 aa13.66□□□□□ -0.22
C9orf3-206ENST00000428313 ARHGEF17Q96PE2 2063 aaPredicted RBP13.65□□□□□ -0.22
C9orf3-206ENST00000428313 IGKV1-12A0A0C4DH73 117 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 IGKV1D-12P01611 117 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 CTXN2P0C2S0 81 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 PMCHP20382 165 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 SRD5A2P31213 254 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 OTX1P32242 354 aaPredicted RBP13.65□□□□□ -0.22
C9orf3-206ENST00000428313 IER3P46695 156 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 GFRA1P56159 465 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 CLDN15P56746 228 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 RBM11P57052 281 aaKnown RBP13.65□□□□□ -0.22
C9orf3-206ENST00000428313 NOGQ13253 232 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 WDR73Q6P4I2 378 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 GJC3Q8NFK1 279 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 TSACCQ96A04 125 aaPredicted RBP13.65□□□□□ -0.22
C9orf3-206ENST00000428313 FAM131CQ96AQ9 280 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 BORCS7Q96B45 105 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 BORCS8Q96FH0 119 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 QTRT1Q9BXR0 403 aaKnown RBP13.65□□□□□ -0.22
C9orf3-206ENST00000428313 MEGF9Q9H1U4 602 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 SLC31A1O15431 190 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 MYBPHQ13203 477 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 TRIP6Q15654 476 aaKnown RBP13.65□□□□□ -0.22
C9orf3-206ENST00000428313 VWA1Q6PCB0 445 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 PET117Q6UWS5 81 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 OR52L2PQ8NGH6 319 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 ABHD3Q8WU67 409 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 DERL1Q9BUN8 251 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 TMEM147Q9BVK8 224 aa13.65□□□□□ -0.22
C9orf3-206ENST00000428313 FAM90A26D6RGX4 464 aa13.64□□□□□ -0.23
C9orf3-206ENST00000428313 TNFSF15O95150 251 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms