RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 MVDP53602 400 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 IL13RA2Q14627 380 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 CDCP2Q5VXM1 449 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 DNM1P46Q6ZS02 220 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 IGHV3-72A0A0B4J1Y9 119 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 TRAV1-2A0A0B4J238 106 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 MAP1LC3B2A6NCE7 125 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 RBMY1BA6NDE4 496 aaKnown RBP4.98□□□□□ -1.61
HERC4-206ENST00000427635 RBMY1EA6NEQ0 496 aaKnown RBP4.98□□□□□ -1.61
HERC4-206ENST00000427635 CEACAM18A8MTB9 384 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 MGST3O14880 152 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 RBMY1DP0C7P1 496 aaKnown RBP4.98□□□□□ -1.61
HERC4-206ENST00000427635 RBMY1A1P0DJD3 496 aaKnown RBP4.98□□□□□ -1.61
HERC4-206ENST00000427635 RBMY1CP0DJD4 496 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 ERVK11-1P61568 191 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 FAM78BQ5VT40 261 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 CGB2Q6NT52 195 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 COLCA1Q6ZS62 124 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 ABHD12Q8N2K0 398 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 OR9G4Q8NGQ1 327 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 RNASE6Q93091 150 aaKnown RBP4.98□□□□□ -1.61
HERC4-206ENST00000427635 TMEM186Q96B77 213 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 MAP1LC3BQ9GZQ8 125 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 DOCK2Q92608 1830 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 CEACAM4O75871 244 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 CD3DP04234 171 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 ZNF415Q09FC8 603 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 POU2AF1Q16633 256 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 UNQ6494/PRO21346Q6UXR6 183 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 ASCL4Q6XD76 172 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 RNASE8Q8TDE3 154 aaKnown RBP4.98□□□□□ -1.61
HERC4-206ENST00000427635 PHLDA1Q8WV24 401 aaPredicted RBP4.98□□□□□ -1.61
HERC4-206ENST00000427635 ERVH48-1M5A8F1 160 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 CXorf1O96002 111 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 FABP4P15090 132 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 HIST1H3AP68431 136 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 PSG6Q00889 435 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 ASAH1Q13510 395 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 TMEM30BQ3MIR4 351 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 ASPHD2Q6ICH7 369 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 TEPPQ6URK8 271 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 SLC35E3Q7Z769 313 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 PNKDQ8N490 385 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 ADAD2Q8NCV1 583 aaKnown RBP4.98□□□□□ -1.61
HERC4-206ENST00000427635 CNRIP1Q96F85 164 aaPredicted RBP4.98□□□□□ -1.61
HERC4-206ENST00000427635 NHSQ6T4R5 1651 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 TRBV5-4A0A0C4DH59 114 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 A0A1W2PPE3 182 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 K7ERU9 68 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 CTSVO60911 334 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 SRSF10O75494 262 aaKnown RBP4.97□□□□□ -1.61
HERC4-206ENST00000427635 HPRT1P00492 218 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 MBPP02686 304 aaPredicted RBP4.97□□□□□ -1.61
HERC4-206ENST00000427635 FCGR3AP08637 254 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 ANOS1P23352 680 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 ISL1P61371 349 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 EFNB1P98172 346 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 INPP5JQ15735 1006 aaPredicted RBP4.97□□□□□ -1.61
HERC4-206ENST00000427635 SP6Q3SY56 376 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 PAPPA-AS1Q5QFB9 102 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 LINC01465Q8N7H1 131 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 TMEM191AQ9H0A3 160 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 DTX4Q9Y2E6 619 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 RNF114Q9Y508 228 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 LOC389332A0A1B0GUA5 103 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 TRGC1P0CF51 173 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 CTGFP29279 349 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 FCGR2BP31994 310 aaPredicted RBP4.97□□□□□ -1.61
HERC4-206ENST00000427635 LY6DQ14210 128 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 GCSAMLQ5JQS6 135 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 TCTEX1D1Q8N7M0 179 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 OR8A1Q8NGG7 326 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 FAM57AQ8TBR7 257 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 CRYGNQ8WXF5 182 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 RBPMSQ93062 196 aaKnown RBP4.97□□□□□ -1.61
HERC4-206ENST00000427635 TMEM45BQ96B21 275 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 CXCL16Q9H2A7 254 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 TBL2Q9Y4P3 447 aaKnown RBP4.97□□□□□ -1.61
HERC4-206ENST00000427635 ASXL3Q9C0F0 2248 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 IFITM10A6NMD0 228 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 DNAL4O96015 105 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 MYOD1P15172 320 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 NOVP48745 357 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 CD81P60033 236 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 FCN2Q15485 313 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 CTF1Q16619 201 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 RNF165Q6ZSG1 346 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 MBD3L1Q8WWY6 194 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 KCNE3Q9Y6H6 103 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 PQLC2LA1A4F0 135 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 B4GALT3O60512 393 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 SRD5A1P18405 259 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 LEPP41159 167 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 HIST1H1AQ02539 215 aaPredicted RBP4.97□□□□□ -1.61
HERC4-206ENST00000427635 FXYD3Q14802 87 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 WDR38Q5JTN6 314 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 FAM74A4Q5TZK3 123 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 UQCC3Q6UW78 93 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 C11orf44Q8N8P7 122 aa4.97□□□□□ -1.61
HERC4-206ENST00000427635 KLHDC3Q9BQ90 382 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms