RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 AHCTF1Q8WYP5 2266 aa12.6□□□□□ -0.39
PTPN13-203ENST00000427191 IGHV1OR21-1A0A087WYE8 117 aa12.6□□□□□ -0.39
PTPN13-203ENST00000427191 APOBEC4Q8WW27 367 aaKnown RBP12.6□□□□□ -0.39
PTPN13-203ENST00000427191 GPR35Q9HC97 309 aa12.6□□□□□ -0.39
PTPN13-203ENST00000427191 OR4C45A6NMZ5 311 aa12.6□□□□□ -0.39
PTPN13-203ENST00000427191 H3BMH7 237 aa12.6□□□□□ -0.39
PTPN13-203ENST00000427191 H7C2G1 150 aa12.6□□□□□ -0.39
PTPN13-203ENST00000427191 NKG7Q16617 165 aa12.6□□□□□ -0.39
PTPN13-203ENST00000427191 NUDT10Q8NFP7 164 aa12.6□□□□□ -0.39
PTPN13-203ENST00000427191 RPL31P62899 125 aaKnown RBP12.6□□□□□ -0.39
PTPN13-203ENST00000427191 MOGAT3Q86VF5 341 aa12.6□□□□□ -0.39
PTPN13-203ENST00000427191 OR11H7Q8NGC8 314 aa12.6□□□□□ -0.39
PTPN13-203ENST00000427191 PTPMT1Q8WUK0 201 aaPredicted RBP12.6□□□□□ -0.39
PTPN13-203ENST00000427191 VSTM2LQ96N03 204 aa12.6□□□□□ -0.39
PTPN13-203ENST00000427191 TMEM222Q9H0R3 208 aa12.6□□□□□ -0.39
PTPN13-203ENST00000427191 ZNF430Q9H8G1 570 aaPredicted RBP12.6□□□□□ -0.39
PTPN13-203ENST00000427191 ELF5Q9UKW6 265 aaPredicted RBP12.6□□□□□ -0.39
PTPN13-203ENST00000427191 PSG2P11465 335 aa12.6□□□□□ -0.39
PTPN13-203ENST00000427191 SF3B6Q9Y3B4 125 aaKnown RBP12.6□□□□□ -0.39
PTPN13-203ENST00000427191 MDC1Q14676 2089 aaKnown RBP12.59□□□□□ -0.39
PTPN13-203ENST00000427191 TCRBV16S1A1N1A0A5B0 115 aa12.59□□□□□ -0.39
PTPN13-203ENST00000427191 CXCL3P19876 107 aa12.59□□□□□ -0.39
PTPN13-203ENST00000427191 NHSQ6T4R5 1651 aa12.59□□□□□ -0.39
PTPN13-203ENST00000427191 PNLIPP16233 465 aa12.59□□□□□ -0.39
PTPN13-203ENST00000427191 ZNF137PP52743 207 aa12.59□□□□□ -0.39
PTPN13-203ENST00000427191 KIAA0040Q15053 153 aa12.59□□□□□ -0.39
PTPN13-203ENST00000427191 ECSCRQ19T08 205 aa12.59□□□□□ -0.39
PTPN13-203ENST00000427191 POLR2AP24928 1970 aaKnown RBP12.59□□□□□ -0.39
PTPN13-203ENST00000427191 LOXL3P58215 753 aa12.59□□□□□ -0.39
PTPN13-203ENST00000427191 TMEM190Q8WZ59 177 aa12.59□□□□□ -0.39
PTPN13-203ENST00000427191 DDA1Q9BW61 102 aa12.59□□□□□ -0.39
PTPN13-203ENST00000427191 RGPD3A6NKT7 1758 aaPredicted RBP12.59□□□□□ -0.39
PTPN13-203ENST00000427191 RPL8P62917 257 aaKnown RBP12.59□□□□□ -0.39
PTPN13-203ENST00000427191 CHD5Q8TDI0 1954 aa12.59□□□□□ -0.39
PTPN13-203ENST00000427191 CDIPTO14735 213 aa12.59□□□□□ -0.39
PTPN13-203ENST00000427191 SOCS1O15524 211 aa12.59□□□□□ -0.39
PTPN13-203ENST00000427191 CA7P43166 264 aa12.59□□□□□ -0.39
PTPN13-203ENST00000427191 MESTQ5EB52 335 aa12.59□□□□□ -0.39
PTPN13-203ENST00000427191 NUP37Q8NFH4 326 aa12.59□□□□□ -0.39
PTPN13-203ENST00000427191 MRPL18Q9H0U6 180 aaKnown RBP12.59□□□□□ -0.39
PTPN13-203ENST00000427191 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.59□□□□□ -0.39
PTPN13-203ENST00000427191 OTPQ5XKR4 325 aa12.59□□□□□ -0.39
PTPN13-203ENST00000427191 FBXW9Q5XUX1 488 aa12.58□□□□□ -0.39
PTPN13-203ENST00000427191 LYZL2Q7Z4W2 148 aa12.58□□□□□ -0.39
PTPN13-203ENST00000427191 MRPL24Q96A35 216 aaKnown RBP12.58□□□□□ -0.39
PTPN13-203ENST00000427191 ATAD5Q96QE3 1844 aa12.58□□□□□ -0.39
PTPN13-203ENST00000427191 PLXNB2O15031 1838 aa12.58□□□□□ -0.4
PTPN13-203ENST00000427191 H3BRM9 83 aa12.58□□□□□ -0.4
PTPN13-203ENST00000427191 RECKO95980 971 aa12.58□□□□□ -0.4
PTPN13-203ENST00000427191 UCNP55089 124 aa12.58□□□□□ -0.4
PTPN13-203ENST00000427191 C2orf83Q53S99 150 aa12.58□□□□□ -0.4
PTPN13-203ENST00000427191 QTRT1Q9BXR0 403 aaKnown RBP12.58□□□□□ -0.4
PTPN13-203ENST00000427191 FOXQ1Q9C009 403 aa12.58□□□□□ -0.4
PTPN13-203ENST00000427191 MRPS18AQ9NVS2 196 aaKnown RBP12.58□□□□□ -0.4
PTPN13-203ENST00000427191 SERGEFQ9UGK8 458 aa12.58□□□□□ -0.4
PTPN13-203ENST00000427191 SOX21Q9Y651 276 aaPredicted RBP12.58□□□□□ -0.4
PTPN13-203ENST00000427191 C1QTNF9BB2RNN3 333 aa12.58□□□□□ -0.4
PTPN13-203ENST00000427191 ABHD3Q8WU67 409 aa12.58□□□□□ -0.4
PTPN13-203ENST00000427191 ZDHHC8Q9ULC8 765 aa12.58□□□□□ -0.4
PTPN13-203ENST00000427191 P2RY6Q15077 328 aa12.58□□□□□ -0.4
PTPN13-203ENST00000427191 MSRB3Q8IXL7 192 aa12.58□□□□□ -0.4
PTPN13-203ENST00000427191 SLC6A13Q9NSD5 602 aa12.58□□□□□ -0.4
PTPN13-203ENST00000427191 PLA2G3Q9NZ20 509 aa12.58□□□□□ -0.4
PTPN13-203ENST00000427191 RPL27AP46776 148 aaKnown RBP12.58□□□□□ -0.4
PTPN13-203ENST00000427191 SNRPD3P62318 126 aaKnown RBP12.58□□□□□ -0.4
PTPN13-203ENST00000427191 ZNF385CQ66K41 422 aaPredicted RBP12.58□□□□□ -0.4
PTPN13-203ENST00000427191 THSD4Q6ZMP0 1018 aa12.58□□□□□ -0.4
PTPN13-203ENST00000427191 MARVELD3Q96A59 401 aa12.58□□□□□ -0.4
PTPN13-203ENST00000427191 MED19A0JLT2 244 aaPredicted RBP12.57□□□□□ -0.4
PTPN13-203ENST00000427191 C19orf67A6NJJ6 358 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 PRSS2P07478 247 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 CDC42EP2O14613 210 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 VENTXO95231 258 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 ZIC1Q15915 447 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 SPSB4Q96A44 273 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 TMEM101Q96IK0 257 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 MRPL16Q9NX20 251 aaKnown RBP12.57□□□□□ -0.4
PTPN13-203ENST00000427191 MGST3O14880 152 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 ANOS1P23352 680 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 PDCD1Q15116 288 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 MEIG1Q5JSS6 88 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 LHX9Q9NQ69 397 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 TRAV9-1A0A075B6T8 112 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 IGHV5-51A0A0C4DH38 117 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 RPS11P62280 158 aaKnown RBP eCLIP12.57□□□□□ -0.4
PTPN13-203ENST00000427191 CEACAM21Q3KPI0 293 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 COX14Q96I36 57 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 AQP10Q96PS8 301 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 SLC25A17O43808 307 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 FAM106AQ4KMX7 169 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 TMEM177Q53S58 311 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 SAPCD1Q5SSQ6 148 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 RASL10BQ96S79 203 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 HOXB1P14653 301 aaPredicted RBP12.57□□□□□ -0.4
PTPN13-203ENST00000427191 C21orf62-AS1Q17RA5 79 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 MDP1Q86V88 176 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 OR8G5Q8NG78 346 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 FAM181BA6NEQ2 426 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 NGFRP08138 427 aa12.57□□□□□ -0.4
PTPN13-203ENST00000427191 INSL4Q14641 139 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms