RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 ERVS71-1P61550 626 aa11.86□□□□□ -0.51
RPL28-202ENST00000426763 UQCC3Q6UW78 93 aa11.86□□□□□ -0.51
RPL28-202ENST00000426763 PDPNQ86YL7 162 aa11.86□□□□□ -0.51
RPL28-202ENST00000426763 PARP11Q9NR21 331 aa11.86□□□□□ -0.51
RPL28-202ENST00000426763 ARHGEF17Q96PE2 2063 aaPredicted RBP11.86□□□□□ -0.51
RPL28-202ENST00000426763 NPIPB7O75200 414 aa11.86□□□□□ -0.51
RPL28-202ENST00000426763 ZNF737O75373 536 aa11.86□□□□□ -0.51
RPL28-202ENST00000426763 SCGB1D1O95968 90 aa11.86□□□□□ -0.51
RPL28-202ENST00000426763 GLIPR1P48060 266 aa11.86□□□□□ -0.51
RPL28-202ENST00000426763 EWSR1Q01844 656 aaKnown RBP eCLIP11.86□□□□□ -0.51
RPL28-202ENST00000426763 CLLU1Q5K131 121 aa11.86□□□□□ -0.51
RPL28-202ENST00000426763 MMD2Q8IY49 270 aa11.86□□□□□ -0.51
RPL28-202ENST00000426763 CLEC7AQ9BXN2 247 aa11.86□□□□□ -0.51
RPL28-202ENST00000426763 SIRT7Q9NRC8 400 aa11.86□□□□□ -0.51
RPL28-202ENST00000426763 OPN4Q9UHM6 478 aa11.86□□□□□ -0.51
RPL28-202ENST00000426763 GVINP1Q7Z2Y8 2422 aa11.86□□□□□ -0.51
RPL28-202ENST00000426763 PPP1R2P9O14990 202 aa11.86□□□□□ -0.51
RPL28-202ENST00000426763 TGOLN2O43493 480 aa11.86□□□□□ -0.51
RPL28-202ENST00000426763 RCC1P18754 421 aaPredicted RBP11.85□□□□□ -0.51
RPL28-202ENST00000426763 NDUFA6P56556 154 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 LAIR2Q6ISS4 152 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 PCSK4Q6UW60 755 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 MSRB2Q9Y3D2 182 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 WSB1Q9Y6I7 421 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 NCOR1O75376 2440 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 PAX5Q02548 391 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 SLC35E4Q6ICL7 350 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 TMEM208Q9BTX3 173 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 ZNF429Q86V71 674 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 ZNRF4Q8WWF5 429 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 ZNF716A6NP11 495 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 TEPPQ6URK8 271 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 MYPOPQ86VE0 399 aaPredicted RBP11.85□□□□□ -0.51
RPL28-202ENST00000426763 SSMEM1Q8WWF3 244 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 REPIN1Q9BWE0 567 aaKnown RBP11.85□□□□□ -0.51
RPL28-202ENST00000426763 NEUROG3Q9Y4Z2 214 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 WDR81Q562E7 1941 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 LYPD3O95274 346 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 PSG7Q13046 419 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 CLEC9AQ6UXN8 241 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 ACP7Q6ZNF0 438 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 SLC24A4Q8NFF2 622 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 OR4X1Q8NH49 305 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 DYNLRB2Q8TF09 96 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 TMEM186Q96B77 213 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 SNRNP40Q96DI7 357 aaKnown RBP11.85□□□□□ -0.51
RPL28-202ENST00000426763 PERPQ96FX8 193 aa11.85□□□□□ -0.51
RPL28-202ENST00000426763 RCC2Q9P258 522 aaKnown RBP11.85□□□□□ -0.51
RPL28-202ENST00000426763 CXCL3P19876 107 aa11.84□□□□□ -0.51
RPL28-202ENST00000426763 Q0VFX4 171 aa11.84□□□□□ -0.51
RPL28-202ENST00000426763 CALHM1Q8IU99 346 aa11.84□□□□□ -0.51
RPL28-202ENST00000426763 OR8I2Q8N0Y5 310 aa11.84□□□□□ -0.51
RPL28-202ENST00000426763 TMEM222Q9H0R3 208 aa11.84□□□□□ -0.51
RPL28-202ENST00000426763 GPR132Q9UNW8 380 aa11.84□□□□□ -0.51
RPL28-202ENST00000426763 GNG4P50150 75 aa11.84□□□□□ -0.51
RPL28-202ENST00000426763 KIAA0141Q14154 515 aaPredicted RBP11.84□□□□□ -0.51
RPL28-202ENST00000426763 DCAF12L2Q5VW00 463 aa11.84□□□□□ -0.51
RPL28-202ENST00000426763 SSX7Q7RTT5 188 aa11.84□□□□□ -0.51
RPL28-202ENST00000426763 RHOVQ96L33 236 aa11.84□□□□□ -0.51
RPL28-202ENST00000426763 LURAP1Q96LR2 239 aa11.84□□□□□ -0.51
RPL28-202ENST00000426763 IQCF6A8MYZ5 107 aa11.84□□□□□ -0.51
RPL28-202ENST00000426763 SFTA3P0C7M3 94 aa11.84□□□□□ -0.51
RPL28-202ENST00000426763 RPL8P62917 257 aaKnown RBP11.84□□□□□ -0.51
RPL28-202ENST00000426763 FAM78BQ5VT40 261 aa11.84□□□□□ -0.51
RPL28-202ENST00000426763 C10orf113Q5VZT2 155 aa11.84□□□□□ -0.51
RPL28-202ENST00000426763 CELA3BP08861 270 aa11.84□□□□□ -0.51
RPL28-202ENST00000426763 KLK2P20151 261 aa11.84□□□□□ -0.51
RPL28-202ENST00000426763 FAM162BQ5T6X4 162 aa11.84□□□□□ -0.51
RPL28-202ENST00000426763 TSC2P49815 1807 aa11.84□□□□□ -0.51
RPL28-202ENST00000426763 G3V3Q6 166 aa11.83□□□□□ -0.51
RPL28-202ENST00000426763 PGLYRP1O75594 196 aaPredicted RBP11.83□□□□□ -0.51
RPL28-202ENST00000426763 TIMP3P35625 211 aa11.83□□□□□ -0.51
RPL28-202ENST00000426763 SPCS3P61009 180 aa11.83□□□□□ -0.51
RPL28-202ENST00000426763 ARTNQ5T4W7 220 aa11.83□□□□□ -0.51
RPL28-202ENST00000426763 PARD6AQ9NPB6 346 aa11.83□□□□□ -0.51
RPL28-202ENST00000426763 WNT9BO14905 357 aa11.83□□□□□ -0.52
RPL28-202ENST00000426763 POC1AQ8NBT0 407 aa11.83□□□□□ -0.52
RPL28-202ENST00000426763 P2RX4Q99571 388 aa11.83□□□□□ -0.52
RPL28-202ENST00000426763 PAFAH1B2P68402 229 aa11.83□□□□□ -0.52
RPL28-202ENST00000426763 DHRS7BQ6IAN0 325 aaPredicted RBP11.83□□□□□ -0.52
RPL28-202ENST00000426763 WDR31Q8NA23 367 aa11.83□□□□□ -0.52
RPL28-202ENST00000426763 MANBALQ9NQG1 85 aa11.83□□□□□ -0.52
RPL28-202ENST00000426763 C17orf100A8MU93 164 aa11.83□□□□□ -0.52
RPL28-202ENST00000426763 CORTO00230 105 aa11.83□□□□□ -0.52
RPL28-202ENST00000426763 PNKDQ8N490 385 aa11.83□□□□□ -0.52
RPL28-202ENST00000426763 ZNRF1Q8ND25 227 aa11.83□□□□□ -0.52
RPL28-202ENST00000426763 STXBP6Q8NFX7 210 aa11.83□□□□□ -0.52
RPL28-202ENST00000426763 A0A1W2PPQ1 181 aa11.83□□□□□ -0.52
RPL28-202ENST00000426763 FGF8P55075 233 aaPredicted RBP11.83□□□□□ -0.52
RPL28-202ENST00000426763 B2MP61769 119 aa11.83□□□□□ -0.52
RPL28-202ENST00000426763 OR11H7Q8NGC8 314 aa11.83□□□□□ -0.52
RPL28-202ENST00000426763 FAM168AQ92567 244 aa11.83□□□□□ -0.52
RPL28-202ENST00000426763 IGKV3D-15A0A087WSY6 115 aa11.82□□□□□ -0.52
RPL28-202ENST00000426763 STARD4Q96DR4 205 aa11.82□□□□□ -0.52
RPL28-202ENST00000426763 TCF20Q9UGU0 1960 aaKnown RBP11.82□□□□□ -0.52
RPL28-202ENST00000426763 H0Y8G0 127 aa11.82□□□□□ -0.52
RPL28-202ENST00000426763 IL18BPO95998 194 aa11.82□□□□□ -0.52
RPL28-202ENST00000426763 FABP9Q0Z7S8 132 aa11.82□□□□□ -0.52
RPL28-202ENST00000426763 AANATQ16613 207 aa11.82□□□□□ -0.52
RPL28-202ENST00000426763 OR4P4Q8NGL7 312 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms