RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 NSUN5P1Q3KNT7 163 aa10.81□□□□□ -0.68
SNX3-204ENST00000426155 SFXN4Q6P4A7 337 aa10.81□□□□□ -0.68
SNX3-204ENST00000426155 CLVS1Q8IUQ0 354 aaPredicted RBP10.81□□□□□ -0.68
SNX3-204ENST00000426155 OR2AK2Q8NG84 335 aa10.81□□□□□ -0.68
SNX3-204ENST00000426155 OR10R2Q8NGX6 335 aa10.81□□□□□ -0.68
SNX3-204ENST00000426155 LGALS14Q8TCE9 139 aa10.81□□□□□ -0.68
SNX3-204ENST00000426155 KCTD7Q96MP8 289 aa10.81□□□□□ -0.68
SNX3-204ENST00000426155 ATG5Q9H1Y0 275 aa10.81□□□□□ -0.68
SNX3-204ENST00000426155 MMP27Q9H306 513 aa10.81□□□□□ -0.68
SNX3-204ENST00000426155 SLC23A1Q9UHI7 598 aa10.81□□□□□ -0.68
SNX3-204ENST00000426155 ADARB2-AS1A8MUL3 147 aa10.8□□□□□ -0.68
SNX3-204ENST00000426155 CSF1P09603 554 aa10.8□□□□□ -0.68
SNX3-204ENST00000426155 CD3GP09693 182 aa10.8□□□□□ -0.68
SNX3-204ENST00000426155 HIST1H1DP16402 221 aaKnown RBP10.8□□□□□ -0.68
SNX3-204ENST00000426155 EBI3Q14213 229 aa10.8□□□□□ -0.68
SNX3-204ENST00000426155 RPL39P5Q59GN2 51 aa10.8□□□□□ -0.68
SNX3-204ENST00000426155 TCTEX1D4Q5JR98 221 aa10.8□□□□□ -0.68
SNX3-204ENST00000426155 STEAP3Q658P3 488 aa10.8□□□□□ -0.68
SNX3-204ENST00000426155 DTX3Q8N9I9 347 aa10.8□□□□□ -0.68
SNX3-204ENST00000426155 OR2T10Q8NGZ9 312 aa10.8□□□□□ -0.68
SNX3-204ENST00000426155 ABHD14BQ96IU4 210 aa10.8□□□□□ -0.68
SNX3-204ENST00000426155 NOL4LQ96MY1 436 aaPredicted RBP10.8□□□□□ -0.68
SNX3-204ENST00000426155 RIMS4Q9H426 269 aaPredicted RBP10.8□□□□□ -0.68
SNX3-204ENST00000426155 ZNF230Q9UIE0 474 aaPredicted RBP10.8□□□□□ -0.68
SNX3-204ENST00000426155 LINC00527Q9UJ94 153 aa10.8□□□□□ -0.68
SNX3-204ENST00000426155 NOTCH1P46531 2555 aa10.79□□□□□ -0.68
SNX3-204ENST00000426155 A0A1W2PRX2 142 aa10.79□□□□□ -0.68
SNX3-204ENST00000426155 LINC01548A6NM66 108 aa10.79□□□□□ -0.68
SNX3-204ENST00000426155 NCBP2LA6PVI3 153 aaKnown RBP10.79□□□□□ -0.68
SNX3-204ENST00000426155 M0QZK8 103 aa10.79□□□□□ -0.68
SNX3-204ENST00000426155 TXNL1O43396 289 aa10.79□□□□□ -0.68
SNX3-204ENST00000426155 LANCL1O43813 399 aa10.79□□□□□ -0.68
SNX3-204ENST00000426155 RGS11O94810 467 aa10.79□□□□□ -0.68
SNX3-204ENST00000426155 FCGR3AP08637 254 aa10.79□□□□□ -0.68
SNX3-204ENST00000426155 CD1BP29016 333 aa10.79□□□□□ -0.68
SNX3-204ENST00000426155 LSM3P62310 102 aaKnown RBP10.79□□□□□ -0.68
SNX3-204ENST00000426155 Q6ZNX1 250 aa10.79□□□□□ -0.68
SNX3-204ENST00000426155 ZNF833PQ6ZTB9 187 aa10.79□□□□□ -0.68
SNX3-204ENST00000426155 TPRA1Q86W33 373 aa10.79□□□□□ -0.68
SNX3-204ENST00000426155 Q8N9W7 124 aa10.79□□□□□ -0.68
SNX3-204ENST00000426155 OR5AU1Q8NGC0 362 aa10.79□□□□□ -0.68
SNX3-204ENST00000426155 OR5H6Q8NGV6 325 aa10.79□□□□□ -0.68
SNX3-204ENST00000426155 ISOC1Q96CN7 298 aa10.79□□□□□ -0.68
SNX3-204ENST00000426155 NABP2Q9BQ15 211 aa10.79□□□□□ -0.68
SNX3-204ENST00000426155 ZNF251Q9BRH9 671 aa10.79□□□□□ -0.68
SNX3-204ENST00000426155 PLSCR3Q9NRY6 295 aa10.79□□□□□ -0.68
SNX3-204ENST00000426155 RHBDL2Q9NX52 303 aa10.79□□□□□ -0.68
SNX3-204ENST00000426155 IGKV1D-8A0A087WSZ0 117 aa10.78□□□□□ -0.68
SNX3-204ENST00000426155 TRDCB7Z8K6 153 aa10.78□□□□□ -0.68
SNX3-204ENST00000426155 HSPA12AO43301 675 aa10.78□□□□□ -0.68
SNX3-204ENST00000426155 FGF16O43320 207 aa10.78□□□□□ -0.68
SNX3-204ENST00000426155 MOSP00540 346 aa10.78□□□□□ -0.68
SNX3-204ENST00000426155 GSTT2P0CG29 244 aa10.78□□□□□ -0.68
SNX3-204ENST00000426155 GSTT2BP0CG30 244 aa10.78□□□□□ -0.68
SNX3-204ENST00000426155 CNTFRP26992 372 aa10.78□□□□□ -0.68
SNX3-204ENST00000426155 CEACAM6P40199 344 aa10.78□□□□□ -0.68
SNX3-204ENST00000426155 TMBIM6P55061 237 aa10.78□□□□□ -0.68
SNX3-204ENST00000426155 F2RL1P55085 397 aa10.78□□□□□ -0.68
SNX3-204ENST00000426155 IGSF11Q5DX21 431 aa10.78□□□□□ -0.68
SNX3-204ENST00000426155 LY6G6FQ5SQ64 297 aa10.78□□□□□ -0.68
SNX3-204ENST00000426155 GLDNQ6ZMI3 551 aaPredicted RBP10.78□□□□□ -0.68
SNX3-204ENST00000426155 CENPVQ7Z7K6 275 aaPredicted RBP10.78□□□□□ -0.68
SNX3-204ENST00000426155 PTX4Q96A99 478 aa10.78□□□□□ -0.68
SNX3-204ENST00000426155 YIPF6Q96EC8 236 aa10.78□□□□□ -0.68
SNX3-204ENST00000426155 RITA1Q96K30 269 aa10.78□□□□□ -0.68
SNX3-204ENST00000426155 AGMATQ9BSE5 352 aa10.78□□□□□ -0.68
SNX3-204ENST00000426155 C11orf54Q9H0W9 315 aaPredicted RBP10.78□□□□□ -0.68
SNX3-204ENST00000426155 PAIP2BQ9ULR5 123 aaKnown RBP10.78□□□□□ -0.68
SNX3-204ENST00000426155 PLXNB1O43157 2135 aa10.78□□□□□ -0.68
SNX3-204ENST00000426155 METTL21EPA6NDL7 271 aa10.77□□□□□ -0.69
SNX3-204ENST00000426155 BET1O15155 118 aa10.77□□□□□ -0.69
SNX3-204ENST00000426155 FABP7O15540 132 aa10.77□□□□□ -0.69
SNX3-204ENST00000426155 ZBTB25P24278 435 aa10.77□□□□□ -0.69
SNX3-204ENST00000426155 MRPS15P82914 257 aaKnown RBP10.77□□□□□ -0.69
SNX3-204ENST00000426155 ARFRP1Q13795 201 aa10.77□□□□□ -0.69
SNX3-204ENST00000426155 IDNKQ5T6J7 187 aa10.77□□□□□ -0.69
SNX3-204ENST00000426155 SLC35E3Q7Z769 313 aa10.77□□□□□ -0.69
SNX3-204ENST00000426155 ZNF329Q86UD4 541 aa10.77□□□□□ -0.69
SNX3-204ENST00000426155 ZBTB8BQ8NAP8 495 aaPredicted RBP10.77□□□□□ -0.69
SNX3-204ENST00000426155 SLC25A38Q96DW6 304 aa10.77□□□□□ -0.69
SNX3-204ENST00000426155 S1PR3Q99500 378 aa10.77□□□□□ -0.69
SNX3-204ENST00000426155 HSPB9Q9BQS6 159 aa10.77□□□□□ -0.69
SNX3-204ENST00000426155 RDH8Q9NYR8 311 aa10.77□□□□□ -0.69
SNX3-204ENST00000426155 RNF150Q9ULK6 438 aa10.77□□□□□ -0.69
SNX3-204ENST00000426155 MGAT4AQ9UM21 535 aa10.77□□□□□ -0.69
SNX3-204ENST00000426155 hCG_2014768A0A024R1R8 64 aa10.76□□□□□ -0.69
SNX3-204ENST00000426155 TMEM235A6NFC5 223 aa10.76□□□□□ -0.69
SNX3-204ENST00000426155 SERPINE3A8MV23 424 aa10.76□□□□□ -0.69
SNX3-204ENST00000426155 LINC00205P59089 165 aa10.76□□□□□ -0.69
SNX3-204ENST00000426155 CD83Q01151 205 aa10.76□□□□□ -0.69
SNX3-204ENST00000426155 MMDQ15546 238 aa10.76□□□□□ -0.69
SNX3-204ENST00000426155 CDNFQ49AH0 187 aa10.76□□□□□ -0.69
SNX3-204ENST00000426155 FAM131AQ6UXB0 335 aa10.76□□□□□ -0.69
SNX3-204ENST00000426155 LINC00299Q6ZSB3 139 aa10.76□□□□□ -0.69
SNX3-204ENST00000426155 FAM71E2Q8N5Q1 922 aa10.76□□□□□ -0.69
SNX3-204ENST00000426155 NUDCD2Q8WVJ2 157 aa10.76□□□□□ -0.69
SNX3-204ENST00000426155 CABLES2Q9BTV7 478 aa10.76□□□□□ -0.69
SNX3-204ENST00000426155 LIN7CQ9NUP9 197 aaKnown RBP10.76□□□□□ -0.69
SNX3-204ENST00000426155 PSMB11A5LHX3 300 aa10.75□□□□□ -0.69
SNX3-204ENST00000426155 RAB29O14966 203 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms