RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 NXPH2O95156 264 aa9.02□□□□□ -0.97
CUX1-205ENST00000425244 ARG1P05089 322 aa9.02□□□□□ -0.97
CUX1-205ENST00000425244 RAB4BP61018 213 aa9.02□□□□□ -0.97
CUX1-205ENST00000425244 ACSF3Q4G176 576 aaPredicted RBP9.02□□□□□ -0.97
CUX1-205ENST00000425244 WDR86Q86TI4 376 aa9.02□□□□□ -0.97
CUX1-205ENST00000425244 ODF3L1Q8IXM7 274 aa9.02□□□□□ -0.97
CUX1-205ENST00000425244 SCCPDHQ8NBX0 429 aa9.02□□□□□ -0.97
CUX1-205ENST00000425244 SNRNP40Q96DI7 357 aaKnown RBP9.02□□□□□ -0.97
CUX1-205ENST00000425244 C14orf144Q96I85 54 aa9.02□□□□□ -0.97
CUX1-205ENST00000425244 CLCF1Q9UBD9 225 aa9.02□□□□□ -0.97
CUX1-205ENST00000425244 DUXBA0A1W2PPF3 345 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 UBE2CO00762 179 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 WDR1O75083 606 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 OR2H2O95918 312 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 IAPPP10997 89 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 CBR1P16152 277 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 CEBPDP49716 269 aaPredicted RBP9.01□□□□□ -0.97
CUX1-205ENST00000425244 UCP2P55851 309 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 RAB5BP61020 215 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 PPP1CBP62140 327 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 TMEM95Q3KNT9 176 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 SOHLH1Q5JUK2 328 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 AKR1C8PQ5T2L2 129 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 CXorf67Q86X51 503 aaPredicted RBP9.01□□□□□ -0.97
CUX1-205ENST00000425244 C15orf54Q8N8G6 183 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 LFNGQ8NES3 379 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 HIST1H2BAQ96A08 127 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 GMPPAQ96IJ6 420 aaPredicted RBP9.01□□□□□ -0.97
CUX1-205ENST00000425244 PKIBQ9C010 78 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 CACNG5Q9UF02 275 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 hCG_1809904A0A1W2PP81 198 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 A0A1W2PPE2 198 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 A0A1W2PR64 198 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 A0A1W2PRV1 198 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 HOXA4Q00056 320 aaPredicted RBP9.01□□□□□ -0.97
CUX1-205ENST00000425244 HABP2Q14520 560 aaPredicted RBP9.01□□□□□ -0.97
CUX1-205ENST00000425244 Q6P435 159 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 FAM214BQ7L5A3 538 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 RBFOX3A6NFN3 312 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 C5orf52A6NGY3 159 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 C1orf196B1AJZ1 125 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 SMPD2O60906 423 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 BAXQ07812 192 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 MRPL49Q13405 166 aaKnown RBP9.01□□□□□ -0.97
CUX1-205ENST00000425244 LY6DQ14210 128 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 TESK1Q15569 626 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 AARDQ4LEZ3 155 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 Q6ZRM9 215 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 THNSL2Q86YJ6 484 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 ABHD14BQ96IU4 210 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 RNF115Q9Y4L5 304 aa9.01□□□□□ -0.97
CUX1-205ENST00000425244 LRP5LA4QPB2 252 aa9□□□□□ -0.97
CUX1-205ENST00000425244 CLEC18AA5D8T8 446 aa9□□□□□ -0.97
CUX1-205ENST00000425244 TXNL1O43396 289 aa9□□□□□ -0.97
CUX1-205ENST00000425244 PAX9P55771 341 aa9□□□□□ -0.97
CUX1-205ENST00000425244 RPL23AP62750 156 aaKnown RBP9□□□□□ -0.97
CUX1-205ENST00000425244 RPP30P78346 268 aaKnown RBP9□□□□□ -0.97
CUX1-205ENST00000425244 GFRALQ6UXV0 394 aa9□□□□□ -0.97
CUX1-205ENST00000425244 FAM24BQ8N5W8 94 aa9□□□□□ -0.97
CUX1-205ENST00000425244 CLEC18CQ8NCF0 446 aa9□□□□□ -0.97
CUX1-205ENST00000425244 SLC25A40Q8TBP6 338 aa9□□□□□ -0.97
CUX1-205ENST00000425244 IL22RA2Q969J5 263 aa9□□□□□ -0.97
CUX1-205ENST00000425244 ATP5SQ99766 215 aa9□□□□□ -0.97
CUX1-205ENST00000425244 CABLES2Q9BTV7 478 aa9□□□□□ -0.97
CUX1-205ENST00000425244 OBP2BQ9NPH6 170 aa9□□□□□ -0.97
CUX1-205ENST00000425244 TRBV6-6A0A0A6YYG2 114 aa9□□□□□ -0.97
CUX1-205ENST00000425244 AHRRA9YTQ3 701 aa9□□□□□ -0.97
CUX1-205ENST00000425244 H0YL77 283 aa9□□□□□ -0.97
CUX1-205ENST00000425244 TCAPO15273 167 aa9□□□□□ -0.97
CUX1-205ENST00000425244 IGHV1-2P23083 117 aa9□□□□□ -0.97
CUX1-205ENST00000425244 PLA2G5P39877 138 aa9□□□□□ -0.97
CUX1-205ENST00000425244 CEACAM6P40199 344 aa9□□□□□ -0.97
CUX1-205ENST00000425244 KIR2DL2P43627 348 aaPredicted RBP9□□□□□ -0.97
CUX1-205ENST00000425244 SULT1A1P50225 295 aa9□□□□□ -0.97
CUX1-205ENST00000425244 COTL1Q14019 142 aa9□□□□□ -0.97
CUX1-205ENST00000425244 ZNF880Q6PDB4 577 aa9□□□□□ -0.97
CUX1-205ENST00000425244 SPSB3Q6PJ21 355 aa9□□□□□ -0.97
CUX1-205ENST00000425244 OR1J1Q8NGS3 322 aa9□□□□□ -0.97
CUX1-205ENST00000425244 GNPNAT1Q96EK6 184 aaPredicted RBP9□□□□□ -0.97
CUX1-205ENST00000425244 GP6Q9HCN6 339 aa9□□□□□ -0.97
CUX1-205ENST00000425244 RNF150Q9ULK6 438 aa9□□□□□ -0.97
CUX1-205ENST00000425244 POLDIP2Q9Y2S7 368 aa9□□□□□ -0.97
CUX1-205ENST00000425244 IFNA5P01569 189 aa8.99□□□□□ -0.97
CUX1-205ENST00000425244 METTL15P1P0C7V9 234 aa8.99□□□□□ -0.97
CUX1-205ENST00000425244 ZNF14P17017 642 aaPredicted RBP8.99□□□□□ -0.97
CUX1-205ENST00000425244 LMO1P25800 156 aa8.99□□□□□ -0.97
CUX1-205ENST00000425244 TGFBR3Q03167 851 aa8.99□□□□□ -0.97
CUX1-205ENST00000425244 OR8G1Q15617 311 aa8.99□□□□□ -0.97
CUX1-205ENST00000425244 MAJINQ3KP22 176 aa8.99□□□□□ -0.97
CUX1-205ENST00000425244 SEM1Q6ZVN7 128 aa8.99□□□□□ -0.97
CUX1-205ENST00000425244 OPN3Q9H1Y3 402 aaPredicted RBP8.99□□□□□ -0.97
CUX1-205ENST00000425244 A0A1B0GU03 582 aa8.99□□□□□ -0.97
CUX1-205ENST00000425244 AGFG2O95081 481 aa8.99□□□□□ -0.97
CUX1-205ENST00000425244 IGKV1-39P01597 117 aa8.99□□□□□ -0.97
CUX1-205ENST00000425244 IGLV2-14P01704 120 aa8.99□□□□□ -0.97
CUX1-205ENST00000425244 MT-ND4LP03901 98 aa8.99□□□□□ -0.97
CUX1-205ENST00000425244 TFF1P04155 84 aa8.99□□□□□ -0.97
CUX1-205ENST00000425244 IGKV1D-39P04432 117 aa8.99□□□□□ -0.97
CUX1-205ENST00000425244 CFAP161Q6P656 301 aa8.99□□□□□ -0.97
CUX1-205ENST00000425244 ZNF497Q6ZNH5 498 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms