RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 C5orf56Q8N8D9 126 aa10.23□□□□□ -0.77
VRK3-203ENST00000424804 ZNF439Q8NDP4 499 aa10.23□□□□□ -0.77
VRK3-203ENST00000424804 NOL4LQ96MY1 436 aaPredicted RBP10.23□□□□□ -0.77
VRK3-203ENST00000424804 MOB4Q9Y3A3 225 aa10.23□□□□□ -0.77
VRK3-203ENST00000424804 DNAH7Q8WXX0 4024 aa10.23□□□□□ -0.77
VRK3-203ENST00000424804 ZNF736B4DX44 427 aaPredicted RBP10.22□□□□□ -0.77
VRK3-203ENST00000424804 ST8SIA5O15466 376 aa10.22□□□□□ -0.77
VRK3-203ENST00000424804 RRP9O43818 475 aaKnown RBP10.22□□□□□ -0.77
VRK3-203ENST00000424804 YPEL1O60688 119 aa10.22□□□□□ -0.77
VRK3-203ENST00000424804 SCTP09683 121 aa10.22□□□□□ -0.77
VRK3-203ENST00000424804 RAB6AP20340 208 aa10.22□□□□□ -0.77
VRK3-203ENST00000424804 HOXD3P31249 432 aaPredicted RBP10.22□□□□□ -0.77
VRK3-203ENST00000424804 TGFBR1P36897 503 aa10.22□□□□□ -0.77
VRK3-203ENST00000424804 TALDO1P37837 337 aa10.22□□□□□ -0.77
VRK3-203ENST00000424804 THBS3P49746 956 aa10.22□□□□□ -0.77
VRK3-203ENST00000424804 EBI3Q14213 229 aa10.22□□□□□ -0.77
VRK3-203ENST00000424804 Q3ZCU0 254 aa10.22□□□□□ -0.77
VRK3-203ENST00000424804 VAX1Q5SQQ9 334 aa10.22□□□□□ -0.77
VRK3-203ENST00000424804 C8orf31Q8N9H6 132 aa10.22□□□□□ -0.77
VRK3-203ENST00000424804 OR4X2Q8NGF9 303 aa10.22□□□□□ -0.77
VRK3-203ENST00000424804 LGALS14Q8TCE9 139 aa10.22□□□□□ -0.77
VRK3-203ENST00000424804 MAFIPQ8WZ33 124 aa10.22□□□□□ -0.77
VRK3-203ENST00000424804 YPEL2Q96QA6 119 aa10.22□□□□□ -0.77
VRK3-203ENST00000424804 Q9N2K0 584 aa10.22□□□□□ -0.77
VRK3-203ENST00000424804 OR1A1Q9P1Q5 309 aa10.22□□□□□ -0.77
VRK3-203ENST00000424804 PSMB11A5LHX3 300 aa10.21□□□□□ -0.77
VRK3-203ENST00000424804 M0QZK8 103 aa10.21□□□□□ -0.77
VRK3-203ENST00000424804 TXNL1O43396 289 aa10.21□□□□□ -0.77
VRK3-203ENST00000424804 AIREO43918 545 aa10.21□□□□□ -0.77
VRK3-203ENST00000424804 PF4P02776 101 aa10.21□□□□□ -0.77
VRK3-203ENST00000424804 CEACAM6P40199 344 aa10.21□□□□□ -0.77
VRK3-203ENST00000424804 OR3A3P47888 321 aa10.21□□□□□ -0.77
VRK3-203ENST00000424804 RPL23AP62750 156 aaKnown RBP10.21□□□□□ -0.77
VRK3-203ENST00000424804 TIMM50Q3ZCQ8 353 aa10.21□□□□□ -0.77
VRK3-203ENST00000424804 STEAP3Q658P3 488 aa10.21□□□□□ -0.77
VRK3-203ENST00000424804 ZNF880Q6PDB4 577 aa10.21□□□□□ -0.77
VRK3-203ENST00000424804 IZUMO1Q8IYV9 350 aa10.21□□□□□ -0.77
VRK3-203ENST00000424804 OR2T10Q8NGZ9 312 aa10.21□□□□□ -0.77
VRK3-203ENST00000424804 EAF1Q96JC9 268 aaPredicted RBP10.21□□□□□ -0.77
VRK3-203ENST00000424804 P2RX4Q99571 388 aa10.21□□□□□ -0.77
VRK3-203ENST00000424804 ZNF230Q9UIE0 474 aaPredicted RBP10.21□□□□□ -0.77
VRK3-203ENST00000424804 LINC00527Q9UJ94 153 aa10.21□□□□□ -0.77
VRK3-203ENST00000424804 MGAT4AQ9UM21 535 aa10.21□□□□□ -0.77
VRK3-203ENST00000424804 DYNC2H1Q8NCM8 4307 aaKnown RBP10.2□□□□□ -0.78
VRK3-203ENST00000424804 RAB27BO00194 218 aa10.2□□□□□ -0.78
VRK3-203ENST00000424804 BET1O15155 118 aa10.2□□□□□ -0.78
VRK3-203ENST00000424804 DUS4LO95620 317 aaKnown RBP10.2□□□□□ -0.78
VRK3-203ENST00000424804 IGHG2P01859 326 aa10.2□□□□□ -0.78
VRK3-203ENST00000424804 HIST1H1DP16402 221 aaKnown RBP10.2□□□□□ -0.78
VRK3-203ENST00000424804 ZBTB25P24278 435 aa10.2□□□□□ -0.78
VRK3-203ENST00000424804 Q8N6K4 173 aa10.2□□□□□ -0.78
VRK3-203ENST00000424804 ST6GALNAC6Q969X2 333 aa10.2□□□□□ -0.78
VRK3-203ENST00000424804 ABHD14BQ96IU4 210 aa10.2□□□□□ -0.78
VRK3-203ENST00000424804 MRPL20Q9BYC9 149 aaKnown RBP10.2□□□□□ -0.78
VRK3-203ENST00000424804 PARP12Q9H0J9 701 aaKnown RBP10.2□□□□□ -0.78
VRK3-203ENST00000424804 RNF150Q9ULK6 438 aa10.2□□□□□ -0.78
VRK3-203ENST00000424804 KCNK7Q9Y2U2 307 aa10.2□□□□□ -0.78
VRK3-203ENST00000424804 SAA2-SAA4A0A096LPE2 208 aa10.19□□□□□ -0.78
VRK3-203ENST00000424804 TRBV6-6A0A0A6YYG2 114 aa10.19□□□□□ -0.78
VRK3-203ENST00000424804 TRDCB7Z8K6 153 aa10.19□□□□□ -0.78
VRK3-203ENST00000424804 MFNGO00587 321 aa10.19□□□□□ -0.78
VRK3-203ENST00000424804 FGF16O43320 207 aa10.19□□□□□ -0.78
VRK3-203ENST00000424804 LANCL1O43813 399 aa10.19□□□□□ -0.78
VRK3-203ENST00000424804 MOSP00540 346 aa10.19□□□□□ -0.78
VRK3-203ENST00000424804 FCGR3AP08637 254 aa10.19□□□□□ -0.78
VRK3-203ENST00000424804 SAA2P0DJI9 122 aaPredicted RBP10.19□□□□□ -0.78
VRK3-203ENST00000424804 CD1BP29016 333 aa10.19□□□□□ -0.78
VRK3-203ENST00000424804 CDNFQ49AH0 187 aa10.19□□□□□ -0.78
VRK3-203ENST00000424804 RPL39P5Q59GN2 51 aa10.19□□□□□ -0.78
VRK3-203ENST00000424804 KHDC1LQ5JSQ8 128 aa10.19□□□□□ -0.78
VRK3-203ENST00000424804 C8orf86Q6ZUL3 223 aa10.19□□□□□ -0.78
VRK3-203ENST00000424804 OR5H6Q8NGV6 325 aa10.19□□□□□ -0.78
VRK3-203ENST00000424804 PTX4Q96A99 478 aa10.19□□□□□ -0.78
VRK3-203ENST00000424804 YIPF6Q96EC8 236 aa10.19□□□□□ -0.78
VRK3-203ENST00000424804 S1PR3Q99500 378 aa10.19□□□□□ -0.78
VRK3-203ENST00000424804 PLSCR3Q9NRY6 295 aa10.19□□□□□ -0.78
VRK3-203ENST00000424804 ELF5Q9UKW6 265 aaPredicted RBP10.19□□□□□ -0.78
VRK3-203ENST00000424804 SERPINE3A8MV23 424 aa10.18□□□□□ -0.78
VRK3-203ENST00000424804 FABP7O15540 132 aa10.18□□□□□ -0.78
VRK3-203ENST00000424804 GSTT2P0CG29 244 aa10.18□□□□□ -0.78
VRK3-203ENST00000424804 GSTT2BP0CG30 244 aa10.18□□□□□ -0.78
VRK3-203ENST00000424804 ZNF137PP52743 207 aa10.18□□□□□ -0.78
VRK3-203ENST00000424804 LSAMPQ13449 338 aa10.18□□□□□ -0.78
VRK3-203ENST00000424804 KIR2DS1Q14954 304 aa10.18□□□□□ -0.78
VRK3-203ENST00000424804 IGSF11Q5DX21 431 aa10.18□□□□□ -0.78
VRK3-203ENST00000424804 DEFB121Q5J5C9 76 aa10.18□□□□□ -0.78
VRK3-203ENST00000424804 GLDNQ6ZMI3 551 aaPredicted RBP10.18□□□□□ -0.78
VRK3-203ENST00000424804 ODF3L1Q8IXM7 274 aa10.18□□□□□ -0.78
VRK3-203ENST00000424804 Q8N9W7 124 aa10.18□□□□□ -0.78
VRK3-203ENST00000424804 CHPT1Q8WUD6 406 aa10.18□□□□□ -0.78
VRK3-203ENST00000424804 EDARADDQ8WWZ3 215 aa10.18□□□□□ -0.78
VRK3-203ENST00000424804 RASL11BQ9BPW5 248 aa10.18□□□□□ -0.78
VRK3-203ENST00000424804 NABP2Q9BQ15 211 aa10.18□□□□□ -0.78
VRK3-203ENST00000424804 C11orf54Q9H0W9 315 aaPredicted RBP10.18□□□□□ -0.78
VRK3-203ENST00000424804 IFI27L2Q9H2X8 130 aa10.18□□□□□ -0.78
VRK3-203ENST00000424804 ZFP57Q9NU63 452 aa10.18□□□□□ -0.78
VRK3-203ENST00000424804 RHBDL2Q9NX52 303 aa10.18□□□□□ -0.78
VRK3-203ENST00000424804 PIPOXQ9P0Z9 390 aa10.18□□□□□ -0.78
VRK3-203ENST00000424804 RBM7Q9Y580 266 aaKnown RBP10.18□□□□□ -0.78
VRK3-203ENST00000424804 IGKV1-6A0A0C4DH72 117 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms